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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100996g1.209.mrna |
| Orig protein id | gnl|cribi|Naga_100996g1.209 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037261.1 | supercontig | KK037261.1:83010..84854 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna10075 ID=rna10075|Name=rna10075|organism=Nannochloropsis gaditana|type=mRNA|length=1630bp
CGTACACAAGTTGAGCTGGTGTACAAAGACAGCGTCCACAACTGCAGCAT
TACGGTTTCAGAAAGCCTCGGTTTGTTGATTTCCTGGCCTAAAAAGTCCT
TTTGGGACGACGGTGCGTCATCCTGATCATCACTAGTACGTGGCGCTCGA
CGGGGTTGTATCGCAAAGTGAAAAAAAGCCCGTTTCGAGCCTTCGAAACT
GCTCACGAGCAGTCTCCCTTAACAGACGTGTTATCGGAGAGCAGAATTCA
TTACGTCGTTACACGGGAAGAGACAAGAGACCTTCACCCTACAATGGATC
GGTACAACACGTCAAAGCTGGAATTTTAGGAGTACGGAGCACCACCACCC
CACCATTCAGGCATTTTTTTCCTTCAAGTGCATCTCCTCCACTTGTTTCC
TCTTTCTTAACGCCATTTCTTTCCTTTGTTTGCACGTTTACTTACGCATT
GTGCTGGACGACTTCCTCTGGGTCTGGGAGATCAACTTTTAAGAATTTGT
ACGACATGGTGTTTAGGTTCCGAATGGAACCTCAGAGCGTTCTGTTCACC
AGAGGATTCCGAGTCTGAATCACTTGTTCGGCGGCACATTTACTGCCACT
TCCTTGTCTCGCAGGCAACCATCTATGGTCCACCCGTGATTCTCTTCATC
AGCATTATTTGTCGGGCGCCTGTTTGAAATCTGGTCCCGTTACGATCTCG
ACAGTACATGTGCAACTTCGTGCTATCTTCAAAATCGAATCAGCCGTTCT
GCTCGGAAAAAGCGTGATGATAAATTAATCGCATGGAGTTCGAAGTATGA
ACATTTTACAGGCATACATGCCCACGCATGCTGCTACTCGCGACGACGAT
GGTCGCAGCCCAAAATGCGAGCCCGAAGGTGTCCATGATAGAGAGCTTCA
GGCTTTCGACGCGCTGGAGGAGGATCGGGAAGAGAGCCGGAGAATCGTGG
AGGACGACACGCAGCAGCTCAACCCCCTCCTGTCGACCCAATCTCACACC
TACGCTTCCTCTTCTCGGTCCCCCCCCCGCGTGGCCGCCTCTGCAGACCT
GCCCTCCCTCTTTCCTGTTCCCTCTCCCTCCCGTGGCCCTTCGCACGACT
CGGGCGTGGATGGATGGATGCCCCTGAAAATGCGACGGGGGAAAACGCGG
AGATGGTCCTTAGACAAGACCCAGGGCGGGGGAGAGAACGGGGTGGAGGA
GGGGCAGGAGGAGATGAAGGCGGCGACCTCGTTTGGGAAAGCCGTGCCCC
TCGCGAAGGTTTTGGCGGAGGAGGAGGGAGGGGGAGAGGAAGGGAGGGAG
GGGACGAGAGAGGAAACAAGGGGGGAGGGGGAGAATCGCCGGAGCATGCG
CAGAGAGCGGGCTGTGAGTGAGAGCGACAAGGAAGGGCAAGGCCCCATTC
ATCAGTATCCTGACCGGGGCGGGAGCCTCGCCGCCTACTTGGGGCCCCCC
TTGAGGGCCTCCTCCTCCCTCGCGCCCTCCCCCCCTTCCTCCTCGGCTAC
TCCCCACCCTCCGGCAGGGACGTGGCGACAAGAGCGATGGCGGAGGGAGA
GAGGGAAGAAAGGGCGGGAATGGGTCGGAGGGCCAGGTGGCGCGTGCTGT
GCGGGACAACCTCGTTGAGAGAGTGACGGG back to topprotein sequence of rna10075 >rna10075-protein ID=rna10075-protein|Name=rna10075|organism=Nannochloropsis gaditana|type=polypeptide|length=373bp
MTTVRSIFAFMLVSKPVVGIIAACWLLACFNRTCSMSHVRPLHHQVLFRL
FVAPVCCAELNLSNYSPFSLPLTRNQPLFGQTGARHDHDRRTSGGCKKGL
ERHVLSPKRAFFRQFSLRQYISYLCLGFLSSMPLLFPPERPRPPPSPSPS
LPSHVLRRNRQRLRDRTGRASTFVLLLLLLSAFCIAAFSPQVTSFPPRAP
SSSALSPQRLTPPPSARRFPFLLPPALPSLFPLFSALPDTAAANRAPLKQ
QQRRAAAAAAGEEAAAAAAAGEEAAAAARAVAKTAEDPWDGHKNGFDWQL
ERARRTLEGGPAHSPFRMDYWRPAPSEDGRRRRRRGERRRLVRLLQDLPQ
QCLPARDREQGPGRGARRGCGEV back to topmRNA from alignment at KK037261.1:83010..84854+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna10075 ID=rna10075|Name=rna10075|organism=Nannochloropsis gaditana|type=mRNA|length=1845bp|location=Sequence derived from alignment at KK037261.1:83010..84854+ (Nannochloropsis gaditana)
gaaggcgtgTGGCTATAAATGAATGCTGCTGGGATCGAGTTATTCCCACG
CGTGCTATCACCTCCCCTGCCACatgagcagcaacagcagcgaTGCGAAG
GAGACGAGAAGTTCTCAGATCGGGACGCTACGCAACTGAATAGGATGGTG
GACGTATGCATGTGCTTTCACCACAATGACCACTGTCCGCTCTATTTTTG
CATTCATGCTGGTGTCGAAGCCCGTGGTTGGAATTATTGCAGCATGCTGG
CTGCTGGCTTGCTTCAATCGCACATGTAGCATGTCCCACGTGCGGCCGCT
TCATCATCAAGTGCTCTTTCGACTATTTGTAGCGCCCGTGTGCTGTGCTG
AGCTGAATCTAAGTAACTACTcacccttttctcttcctctaaCACGAAAT
CAACCCCTTTTCGGTCAGACAGGCGCCCGACACGACCACGATCGCAGGAC
ATCTGGCGGGTGCAAGAAGGGGCTGGAACGACATGTGCTAAGCCCTAAAA
GAGCTTTTTTCAGACAGTTTTCATTGAGACAATACATCTCCTATCTTTGC
CTCGGATTCTTAAGCTCCAtgccgctcctcttcccgcctgaAAGGCccag
gcccccgccctcgccttcacCCTCTTTGCCATCCCACGTCCTCAGGAGAA
ACCGCCAGCGCCTAAGAGACCGCACAGGAAGGGCCAGCACCttcgtgctc
ctcctcctccttctctccgcATTCTGCATCGCCGCCTTTAGCCCCCAAGt
cacctcttttcctccccgtgccccctcctcctctgccctttccccccagc
GCCTGACGCCTCCACCGTCCGCCCGCcgatttcccttcctgcttcccccc
gcccttccctccctctttcccctcttctccgccctGCCCGACACTGCAGC
TGCAAACCGCGCTCCTCTCaaacaacaacaacgacgagcggcggcggcgg
cggcgggagaggaggccgcggcggcggcggcggcgggagaggaggccgcg
gccgccgcgaGGGCAGTGGCCAAGACTGCGGAAGACCCCTGGGACGGTAG
GCGGCACTCttatcttccctccctctgtctctctctcgcctcgTATCTCT
CTGGCCTCTCTGCTGCCGCCTTTCTCGGTCTGCCGGTGCCTGTCTTGCCG
CGGCAGCCCCTGCCGCTTGTCCCTCGGCAATTGCCtcgccctcatcctcc
ctccctccctccctccctccctccctccctgtctccttccctgcagGCCA
CAAAAACGGTTTCGACTGGCAGTTGGAACGCGCCCGTCGGACcctggagg
gggggccgGCCCATAGCCCTTTCCGCATGGACTATTGGCGCCCGGCGCCT
TCGGAGGAcggcaggaggcggcggcggcggggggagcgGCGTCGGCTGGT
TCGACTCCTGCAAGATCTTCCTCAGCAATGCCTACCAGCTCGTGACAGGG
AGCAAGGGCCTGGACGGGGCGCCCGTCGCGGATGTGGGGAAGTATAACGT
GCgtgcttccccgccctccctccctccctccctcccgccctccctccctc
cctcccgccctccctccctcccttccggccTCCTTTTCGAAAactactcc
ctccctcctttccagtACCCCTTTTGAGGATTCATAAGGCTTCCTATGCG
TCGCTCAACTccagccccttccctccctccctcgctccctacctccctcc
ctccctccctccctctctacgcAGGGCTCGTGGACCAACTTCCTGGCCAA
GGTCATGAGCGGGCAGTTGGAGGAGCTAGCGGgggccccctcttcctcct
cctcgccaaaTACTACAAGAAGCACGGGCCTgtacgtcctccttc back to topCoding sequence (CDS) from alignment at KK037261.1:83010..84854+ >rna10075 ID=rna10075|Name=rna10075|organism=Nannochloropsis gaditana|type=CDS|length=2244bp|location=Sequence derived from alignment at KK037261.1:83010..84854+ (Nannochloropsis gaditana)
ATGACCACTGTCCGCTCTATTTTTGCATTCATGCTGGTGTCGAAGCCCGT
GGTTGGAATTATTGCAGCATGCTGGCTGCTGGCTTGCTTCAATCGCACAT
GTAGCATGTCCCACGTGCGGCCGCTTCATCATCAAGTGCTCTTTCGACTA
TTTGTAGCGCCCGTGTGCTGTGCTGAGCTGAATCTAAGTAACTACTcacc
cttttctcttcctctaaCACGAAATCAACCCCTTTTCGGTCAGACAGGCG
CCCGACACGACCACGATCGCAGGACATCTGGCGGGTGCAAGAAGGGGCTG
GAACGACATGTGCTAAGCCCTAAAAGAGCTTTTTTCAGACAGTTTTCATT
GAGACAATACATCTCCTATCTTTGCCTCGGATTCTTAAGCTCCAtgccgc
tcctcttcccgcctgaAAGGCccaggcccccgccctcgccttcacCCTCT
TTGCCATCCCACGTCCTCAGGAGAAACCGCCAGCGCCTAAGAGACCGCAC
AGGAAGGGCCAGCACCttcgtgctcctcctcctccttctctccgcATTCT
GCATCGCCGCCTTTAGCCCCCAAGtcacctcttttcctccccgtgccccc
tcctcctctgccctttccccccagcGCCTGACGCCTCCACCGTCCGCCCG
Ccgatttcccttcctgcttccccccgcccttccctccctctttcccctct
tctccgccctGCCCGACACTGCAGCTGCAAACCGCGCTCCTCTCaaacaa
caacaacgacgagcggcggcggcggcggcgggagaggaggccgcggcggc
ggcggcggcgggagaggaggccgcggccgccgcgaGGGCAGTGGCCAAGA
CTGCGGAAGACCCCTGGGACGGCCACAAAAACGGTTTCGACTGGCAGTTG
GAACGCGCCCGTCGGACcctggagggggggccgGCCCATAGCCCTTTCCG
CATGGACTATTGGCGCCCGGCGCCTTCGGAGGAcggcaggaggcggcggc
ggcggggggagcgGCGTCGGCTGGTTCGACTCCTGCAAGATCTTCCTCAG
CAATGCCTACCAGCTCGTGACAGGGAGCAAGGGCCTGGACGGGGCGCCCG
TCGCGGATGTGGGGAAGTATAAATGACCACTGTCCGCTCTATTTTTGCAT
TCATGCTGGTGTCGAAGCCCGTGGTTGGAATTATTGCAGCATGCTGGCTG
CTGGCTTGCTTCAATCGCACATGTAGCATGTCCCACGTGCGGCCGCTTCA
TCATCAAGTGCTCTTTCGACTATTTGTAGCGCCCGTGTGCTGTGCTGAGC
TGAATCTAAGTAACTACTcacccttttctcttcctctaaCACGAAATCAA
CCCCTTTTCGGTCAGACAGGCGCCCGACACGACCACGATCGCAGGACATC
TGGCGGGTGCAAGAAGGGGCTGGAACGACATGTGCTAAGCCCTAAAAGAG
CTTTTTTCAGACAGTTTTCATTGAGACAATACATCTCCTATCTTTGCCTC
GGATTCTTAAGCTCCAtgccgctcctcttcccgcctgaAAGGCccaggcc
cccgccctcgccttcacCCTCTTTGCCATCCCACGTCCTCAGGAGAAACC
GCCAGCGCCTAAGAGACCGCACAGGAAGGGCCAGCACCttcgtgctcctc
ctcctccttctctccgcATTCTGCATCGCCGCCTTTAGCCCCCAAGtcac
ctcttttcctccccgtgccccctcctcctctgccctttccccccagcGCC
TGACGCCTCCACCGTCCGCCCGCcgatttcccttcctgcttccccccgcc
cttccctccctctttcccctcttctccgccctGCCCGACACTGCAGCTGC
AAACCGCGCTCCTCTCaaacaacaacaacgacgagcggcggcggcggcgg
cgggagaggaggccgcggcggcggcggcggcgggagaggaggccgcggcc
gccgcgaGGGCAGTGGCCAAGACTGCGGAAGACCCCTGGGACGGCCACAA
AAACGGTTTCGACTGGCAGTTGGAACGCGCCCGTCGGACcctggaggggg
ggccgGCCCATAGCCCTTTCCGCATGGACTATTGGCGCCCGGCGCCTTCG
GAGGAcggcaggaggcggcggcggcggggggagcgGCGTCGGCTGGTTCG
ACTCCTGCAAGATCTTCCTCAGCAATGCCTACCAGCTCGTGACAGGGAGC
AAGGGCCTGGACGGGGCGCCCGTCGCGGATGTGGGGAAGTATAA back to top
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