rna10074, rna10074 (mRNA) Nannochloropsis gaditana

Overview
Namerna10074
Unique Namerna10074
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1269
Alignment locationKK037261.1:80827..82773 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100996g2.210.mrna
Orig protein idgnl|cribi|Naga_100996g2.210
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037261.1supercontigKK037261.1:80827..82773 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100996g2gene9776Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10074rna10074-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20630.1cds10043Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10074 ID=rna10074|Name=rna10074|organism=Nannochloropsis gaditana|type=mRNA|length=1269bp
TGAGCGGAGTGTCCGATCGTATCTCCCCCGGCATGAATCCCTTGACCAAG
ATTGTCCCCCGTTAGAGTCTATCTAGCGTGCCCGAGCATCATCGTCCCAT
TATCGTCTCATTTCCTGCCCCCCTTTTTTACTTCCCTCATTTTCTTGCCA
GGACCTTCCGTCCCTTCCCATCAGAATATGAGCTCTACGGGTGCTGGGTA
TGATGTGTCACCCACCACATTCTCGCCGGACGGACGACTTTTTCAAGTAG
AGTATGCTGGCAAGGCCGTGGAGAACAGCGGCACAGCCATTGGCCTGAAG
TGCAAAGACGGGGTCATTCTAGCCGTGGAAAATCTTATGCTCTCAAAGTT
ACTGGTGTCCAACTCGAACAGGCGGACATATAATGTGGGCTCTCACATTT
CCATCGCTGTAGCAGGACTGGTCTCGGACGGGCGGCAGGTAGTAAATCGA
GCCCGGGAGGAAGCCGAGAACTACAAGGACAACTACGGAAGCGACATGCC
CCCCACAATCCTGGCCGATCGCCTCGCACAGTTTGTCCACTATTTTACCC
TCAACTACTCCTTGCGGCCCTTCGGCGCCTCCGTCCTCATTGCTGGCCAC
GACGCCTTCACCGACAGCATTGAGCTTAACGTGATCGAGCCCTCCGGAGT
CGCCTACAAATTTTTTGGCGCGGCGCTGGGAAAAGGCCGGCAAGGAGCGA
AGACAGAGATCGAGAAGCTGAAACTGACAGAAACCACCTGCGACGATGCG
GTGAAGGAGATGGCTAAGATCCTGCACAAGCTCCACGACGAGAGCAAGGA
CAAGCCTTTCGAATTGGAGATGGCCTGGGTAACGGCAGCGAACGGCTACA
AGGCCCAGAGGGTGCCCCGGGACATAGTGTAAGTTACGGGCGCCTTTTGT
TCCCCCTTCTTTCCTCTGTTAGACAAATGGGTTTTTTGGTGTATCAGTGT
GGGTGCCTGTGAACGGTTTTACGGGTCAATTTAATGAAAAAGTGCCAATG
TTGAATGGCACGCGTCGGCTGTGCAGACTTTGGCTCATACATCGCTTTCC
TATCCCTCTTACGCAGCGCGGCGGCCGAAAAGTGGGCAAAAGAAGCCATT
GAGGCAGAGGATATGGATGAGAGTGACGAGGAGGAGGGAGGTACAGCCCC
ATAGAGGAGACGGTCAAGAAATGGATGGGAAAGAAATTGGTTGGAGATGG
GCCGTGTGTCTTTATAGGGAGGCTTAATTGTGAAAGAAAAAAGAAAAGAA
ATCCAACATTAGAGAATTG
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protein sequence of rna10074

>rna10074-protein ID=rna10074-protein|Name=rna10074|organism=Nannochloropsis gaditana|type=polypeptide|length=273bp
MNILQAYMPTHAATRDDDGRSPKCEPEGVHDRELQAFDALEEDREESRRI
VEDDTQQLNPLLSTQSHTYASSSRSPPRVAASADLPSLFPVPSPSRGPSH
DSGVDGWMPLKMRRGKTRRWSLDKTQGGGENGVEEGQEEMKAATSFGKAV
PLAKVLAEEEGGGEEGREGTREETRGEGENRRSMRRERAVSESDKEGQGP
IHQYPDRGGSLAAYLGPPLRASSSLAPSPPSSSATPHPPAGTWRQERWRR
ERGKKGREWVGGPGGACCAGQPR
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mRNA from alignment at KK037261.1:80827..82773-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10074 ID=rna10074|Name=rna10074|organism=Nannochloropsis gaditana|type=mRNA|length=1947bp|location=Sequence derived from alignment at KK037261.1:80827..82773- (Nannochloropsis gaditana)
CGTACACAAGTTGAGCTGGTGTACAAAGACAGCGTCCACAACTGCAGCAT
TACGGTTTCAGAAAGCCTCGGTTTGTTGATTTCCTGGCCTAAAAAGTCCT
TTTGGGACGACGGTGCGTCATCCTGATCATCACTAGTACGTGGCGCTCGA
CGGGGTTGTATCGCAAAGTGAAAAAAAGCCCGTTTCGAGCCTTCGAAACT
GCTCACGAGCAGTCTCCCTTAACAGACGTGTTATCGGAGAGCAGAATTCA
TTACGTCGTTACACGGGAAGAGACAAGAGACCTTCACCCTACAATGGATC
GGTACAACACGTCAAAGCTGGAATTTTAGGAGTACGGAGCACCACCACCC
CACCATTCAGGCATTTTTTTCCTTCAAGTGCATCTCCTCCACTTGTTTCC
TCTTTCTTAACGCCATTTCTTTCCTTTGTTTGCACGTTTACTTACGCATT
GTGCTGGACGACTTCCTCTGGGTCTGGGAGATCAACTTTTAAGAATTTGT
ACGACATGGTGTTTAGGTTCCGAATGGAACCTCAGAGCGTTCTGTTCACC
AGAGGATTCCGAGTCTGAATCACTTGTTCGGCGGCACATTTACTGCCACT
TCCTTGTCTCGCAGGCAACCATCTATGGTCCACCCGTGATTCTCTTCATC
AGCATTATTTGTCGGGCGCCTGTTTGAAATCTGGTCCCGTTACGATCTCG
ACAGTACATGTGCAACTTCGTGCTATCTTCAAAATCGAATCAGCCGTTCT
GCTCGGAAAAAGCGTGATGATAAATTAATCGCATGGAGTTCGAAGTATGA
ACATTTTACAGGCGTATGTATTGTAATATAGCCAAGACGCCCCTTTCTCC
ATGTGTCCTTCCTCCCTCCCTTCGGGTCTCTTTTTTATCCCTACTGACCT
GCCTCCTAACCTCCCCACTTCCATCCTGTGACGCATCGCCTCATTTTCCG
ACTTTCTTGCTCCTCATACTACACTATACCACGCAGATACATGCCCACGC
ATGCTGCTACTCGCGACGACGATGGTCGCAGCCCAAAATGCGAGCCCGAA
GGTGTCCATGATAGAGAGCTTCAGGCTTTCGACGCGCTGGAGGAGGATCG
GGAAGAGAGCCGGAGAATCGTGGAGGACGACACGCAGCAGCTCAACCCCC
TCCTGTCGACCCAATCTCACACCTACGCTTCCTCTTCTCGGTCCCCCCCC
CGCGTGGCCGCCTCTGCAGACCTGCCCTCCCTCTTTCCTGTTCCCTCTCC
CTCCCGTGGCCCTTCGCACGACTCGGGCGTGGATGGATGGATGCCCCTGA
AAATGCGACGGGGGAAAACGCGGAGATGGTCCTTAGACAAGACCCAGGGC
GGGGGAGAGAACGGGGTGGAGGAGGGGCAGGAGGAGATGAAGGCGGCGAC
CTCGTTTGGGAAAGCCGTGCCCCTCGCGAAGGTTTTGGCGGAGGAGGAGG
GAGGGGGAGAGGAAGGGAGGGAGGGGACGAGAGAGGAAACAAGGGGGGAG
GGGGAGAATCGCCGGAGCATGCGCAGAGAGCGGGCTGTGAGTGAGAGCGA
CAAGGAAGGTAAGAGGACGCGAAGGGAGAGGGAAAGGGAAACGAGGCGCG
AGGATAGGTTAGAAACGGCGTGCTCTCCCTCCACCGTTACTCCGTGCATC
GGAACCGTTACTCTACGCTCTACCCGCCCTCCCCACATCACCCTCTCCCC
AGGGCAAGGCCCCATTCATCAGTATCCTGACCGGGGCGGGAGCCTCGCCG
CCTACTTGGGGCCCCCCTTGAGGGCCTCCTCCTCCCTCGCGCCCTCCCCC
CCTTCCTCCTCGGCTACTCCCCACCCTCCGGCAGGGACGTGGCGACAAGA
GCGATGGCGGAGGGAGAGAGGGAAGAAAGGGCGGGAATGGGTCGGAGGGC
CAGGTGGCGCGTGCTGTGCGGGACAACCTCGTTGAGAGAGTGACGGG
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Coding sequence (CDS) from alignment at KK037261.1:80827..82773-

>rna10074 ID=rna10074|Name=rna10074|organism=Nannochloropsis gaditana|type=CDS|length=2466bp|location=Sequence derived from alignment at KK037261.1:80827..82773- (Nannochloropsis gaditana)
GGCAAGGCCCCATTCATCAGTATCCTGACCGGGGCGGGAGCCTCGCCGCC
TACTTGGGGCCCCCCTTGAGGGCCTCCTCCTCCCTCGCGCCCTCCCCCCC
TTCCTCCTCGGCTACTCCCCACCCTCCGGCAGGGACGTGGCGACAAGAGC
GATGGCGGAGGGAGAGAGGGAAGAAAGGGCGGGAATGGGTCGGAGGGCCA
GGTGGCGCGTGCTGTGCGGGACAACCTCGTTGAATACATGCCCACGCATG
CTGCTACTCGCGACGACGATGGTCGCAGCCCAAAATGCGAGCCCGAAGGT
GTCCATGATAGAGAGCTTCAGGCTTTCGACGCGCTGGAGGAGGATCGGGA
AGAGAGCCGGAGAATCGTGGAGGACGACACGCAGCAGCTCAACCCCCTCC
TGTCGACCCAATCTCACACCTACGCTTCCTCTTCTCGGTCCCCCCCCCGC
GTGGCCGCCTCTGCAGACCTGCCCTCCCTCTTTCCTGTTCCCTCTCCCTC
CCGTGGCCCTTCGCACGACTCGGGCGTGGATGGATGGATGCCCCTGAAAA
TGCGACGGGGGAAAACGCGGAGATGGTCCTTAGACAAGACCCAGGGCGGG
GGAGAGAACGGGGTGGAGGAGGGGCAGGAGGAGATGAAGGCGGCGACCTC
GTTTGGGAAAGCCGTGCCCCTCGCGAAGGTTTTGGCGGAGGAGGAGGGAG
GGGGAGAGGAAGGGAGGGAGGGGACGAGAGAGGAAACAAGGGGGGAGGGG
GAGAATCGCCGGAGCATGCGCAGAGAGCGGGCTGTGAGTGAGAGCGACAA
GGAAGATGAACATTTTACAGGCGGCAAGGCCCCATTCATCAGTATCCTGA
CCGGGGCGGGAGCCTCGCCGCCTACTTGGGGCCCCCCTTGAGGGCCTCCT
CCTCCCTCGCGCCCTCCCCCCCTTCCTCCTCGGCTACTCCCCACCCTCCG
GCAGGGACGTGGCGACAAGAGCGATGGCGGAGGGAGAGAGGGAAGAAAGG
GCGGGAATGGGTCGGAGGGCCAGGTGGCGCGTGCTGTGCGGGACAACCTC
GTTGAATACATGCCCACGCATGCTGCTACTCGCGACGACGATGGTCGCAG
CCCAAAATGCGAGCCCGAAGGTGTCCATGATAGAGAGCTTCAGGCTTTCG
ACGCGCTGGAGGAGGATCGGGAAGAGAGCCGGAGAATCGTGGAGGACGAC
ACGCAGCAGCTCAACCCCCTCCTGTCGACCCAATCTCACACCTACGCTTC
CTCTTCTCGGTCCCCCCCCCGCGTGGCCGCCTCTGCAGACCTGCCCTCCC
TCTTTCCTGTTCCCTCTCCCTCCCGTGGCCCTTCGCACGACTCGGGCGTG
GATGGATGGATGCCCCTGAAAATGCGACGGGGGAAAACGCGGAGATGGTC
CTTAGACAAGACCCAGGGCGGGGGAGAGAACGGGGTGGAGGAGGGGCAGG
AGGAGATGAAGGCGGCGACCTCGTTTGGGAAAGCCGTGCCCCTCGCGAAG
GTTTTGGCGGAGGAGGAGGGAGGGGGAGAGGAAGGGAGGGAGGGGACGAG
AGAGGAAACAAGGGGGGAGGGGGAGAATCGCCGGAGCATGCGCAGAGAGC
GGGCTGTGAGTGAGAGCGACAAGGAAGATGAACATTTTACAGGCGGCAAG
GCCCCATTCATCAGTATCCTGACCGGGGCGGGAGCCTCGCCGCCTACTTG
GGGCCCCCCTTGAGGGCCTCCTCCTCCCTCGCGCCCTCCCCCCCTTCCTC
CTCGGCTACTCCCCACCCTCCGGCAGGGACGTGGCGACAAGAGCGATGGC
GGAGGGAGAGAGGGAAGAAAGGGCGGGAATGGGTCGGAGGGCCAGGTGGC
GCGTGCTGTGCGGGACAACCTCGTTGAATACATGCCCACGCATGCTGCTA
CTCGCGACGACGATGGTCGCAGCCCAAAATGCGAGCCCGAAGGTGTCCAT
GATAGAGAGCTTCAGGCTTTCGACGCGCTGGAGGAGGATCGGGAAGAGAG
CCGGAGAATCGTGGAGGACGACACGCAGCAGCTCAACCCCCTCCTGTCGA
CCCAATCTCACACCTACGCTTCCTCTTCTCGGTCCCCCCCCCGCGTGGCC
GCCTCTGCAGACCTGCCCTCCCTCTTTCCTGTTCCCTCTCCCTCCCGTGG
CCCTTCGCACGACTCGGGCGTGGATGGATGGATGCCCCTGAAAATGCGAC
GGGGGAAAACGCGGAGATGGTCCTTAGACAAGACCCAGGGCGGGGGAGAG
AACGGGGTGGAGGAGGGGCAGGAGGAGATGAAGGCGGCGACCTCGTTTGG
GAAAGCCGTGCCCCTCGCGAAGGTTTTGGCGGAGGAGGAGGGAGGGGGAG
AGGAAGGGAGGGAGGGGACGAGAGAGGAAACAAGGGGGGAGGGGGAGAAT
CGCCGGAGCATGCGCAGAGAGCGGGCTGTGAGTGAGAGCGACAAGGAAGA
TGAACATTTTACAGGC
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Synonyms
Publications