rna10069, rna10069 (mRNA) Nannochloropsis gaditana

Overview
Namerna10069
Unique Namerna10069
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length811
Alignment locationKK037261.1:59411..59915 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101561g2.4131.mrna
Orig protein idgnl|cribi|Naga_101561g2.4131
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037261.1supercontigKK037261.1:59411..59915 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101561g2gene9770Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20635.1cds10038Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10069rna10069-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10069 ID=rna10069|Name=rna10069|organism=Nannochloropsis gaditana|type=mRNA|length=811bp
AGATCCTCATGTACTGCACGGGCGGCGTTCGGTGCGAGCGAGCAAGCGCC
TTCCTCCGATCACAGGGCTACCGAGACGTGGTGCAGCTTCGAGGCGGGAT
CGTCCGGTACCTGGAAGCCTTCCCGGAAGGAGGCTTCTTCCACGGCAAGA
ATTTTGTTTTCGACGAGCGGGTGAGCGTCGCGCCGGCAGGGGCAGGGAGG
ACTGGGAAGGGAGGGCGGGAGGGAGAGAGGGAGGGAGGGGGTGCAAGGGA
GGACCTGGTACCTCCCCCTTGTCCCGGTCCGTCCTGTGAGTCTCACCGGG
ACGCGGAGTCTCTGTATCCCAGTGCCCGGATTGTGGAACCGTCTGCCCCT
TCAGCCTTGGTGCACTTGGATGCGGATGGGAGGGAAGGAGGGAGGGAGGG
AGGAAGGGAGGGAAGGAGGGATGTGGTGGGTTCTTGTCAGGTCTGTGCGC
AATCTTGGGACGACTACAAGAGCCGTACACGCTGTCGGCACTGTCGGATG
CTCCTGCTCGTGTGTGACGCGTGCCGCGACCGACCGGGGCGATTGGTTGA
GAGAGGCGGAGAAAGGGGGGGAGCCGGGTGGCTGTGTGAGCACTGCCAGC
CGCAACGAGAGGAGAGGGAGGTGCTTAGGAGCCAGAGGGCGAGGAGGCGG
AGAAGGAAAGGGTCGATGACGTTTTTACCAGCCTCTGAGGGCCTCACAGG
CTCTGAAATGGGAGAGGAAATTCGAAGTGACGCGAGAGCGGCCACCCTGG
AGGGGGGTGGAAAGTAACTGAATTCCTGCACAGAGGAGAAATAGAAGCGG
AAATGGAAATG
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protein sequence of rna10069

>rna10069-protein ID=rna10069-protein|Name=rna10069|organism=Nannochloropsis gaditana|type=polypeptide|length=113bp
MQTLPQAPPLQTTPPAVQDLDTRPAILLYYAYRPLSHPSSLCPSTPPSSP
EGPSPLARKEDNDHVDKREHLACWYEKTCAALGLKGRVRVAWDGVNATLG
ELRVGCLRTPASL
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mRNA from alignment at KK037261.1:59411..59915-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10069 ID=rna10069|Name=rna10069|organism=Nannochloropsis gaditana|type=mRNA|length=505bp|location=Sequence derived from alignment at KK037261.1:59411..59915- (Nannochloropsis gaditana)
ACATGCGACTCATGAATTTTCTCACCAGTGCAATCAATACAATATCTTCC
AGGCAGTCTTCAGAGTGGGGACGGATTGCTTCACCGGGTGGAAAGGGACT
CTCGCATTTTTTCTTCCAACATTATTCGGGTGCAAGCAGAGTCACCTACT
TCACATTGGCACCATGCAGACTCTTCCCCAGGCTCCTCCGCTACAGACAA
CACCACCTGCTGTCCAAGACCTAGACACACGCCCCGCTATTCTGCTGTAC
TATGCCTACCGCCCTCTCTCTCATCCGTCCTCGCTCTGTCCTTCAACCCC
GCCATCGTCCCCTGAGGGCCCTTCCCCCTTGGCACGGAAAGAGGATAATG
ACCATGTGGACAAGCGGGAGCACTTGGCTTGTTGGTACGAAAAAACATGC
GCAGCCTTGGGTCTTAAGGGCCGGGTGCGGGTAGCGTGGGACGGAGTGAA
CGCCACCTTAGGTGAGCTACGAGTGGGGTGTCTCCGTACGCCCGCCTCAC
TATAA
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Coding sequence (CDS) from alignment at KK037261.1:59411..59915-

>rna10069 ID=rna10069|Name=rna10069|organism=Nannochloropsis gaditana|type=CDS|length=342bp|location=Sequence derived from alignment at KK037261.1:59411..59915- (Nannochloropsis gaditana)
ATGCAGACTCTTCCCCAGGCTCCTCCGCTACAGACAACACCACCTGCTGT
CCAAGACCTAGACACACGCCCCGCTATTCTGCTGTACTATGCCTACCGCC
CTCTCTCTCATCCGTCCTCGCTCTGTCCTTCAACCCCGCCATCGTCCCCT
GAGGGCCCTTCCCCCTTGGCACGGAAAGAGGATAATGACCATGTGGACAA
GCGGGAGCACTTGGCTTGTTGGTACGAAAAAACATGCGCAGCCTTGGGTC
TTAAGGGCCGGGTGCGGGTAGCGTGGGACGGAGTGAACGCCACCTTAGGT
GAGCTACGAGTGGGGTGTCTCCGTACGCCCGCCTCACTATAA
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Synonyms
Publications