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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100172g13.4629.mrna |
| Orig protein id | gnl|cribi|Naga_100172g13.4629 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037260.1 | supercontig | KK037260.1:98008..99276 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna10048 ID=rna10048|Name=rna10048|organism=Nannochloropsis gaditana|type=mRNA|length=2260bp
GCTTAAGCTTATAGCGGGCCCCACTTCCCATTTCCACTCGAAAGTTTTTT
GCCATCTCGCTCTGTATCCGCAGGGGCGCATTTTAGAGTCTAGGACCGTG
CATTCGGTCGGTCGTCGCGGTGGTAGGCAGCAATAGCCAGCAGGGAAAAG
CCAGAGGGTTGAGGTGGTGCTGCAGAGAGCATGCGACCCTCTCCCTTCCT
AGTATGCCTCTCCTACGTGGCTCTTCTTGGCTCGCAGGCCTCCTGGGCTT
GGATTGCCTTCCTCCCTGTGGGCCAGCGGGGAGCATCTGCAGCGAGCTGC
CCCTCCTCGCCGCAAACTCTGTGGGCGGGTGTCAGTAGCCAAGGCCCGAG
AAGATGTCCTTCCTGCGGGGCCCTCGCCTGCTCCACGCCCTCCTCATCGT
CCTCCTCTTCCCTGGCCCTCCTGCCCCCCACCCTCCCTTCCGCAAGGGGT
GGCGGCGCCTTCTCCTCCCGGCGCCGAGGGCGACAGCCCCCCCCGGTTTC
CTCCCCCTCTGAGCTCAGGGCCAGCGGGGCAGACGGCTCCTCCGACCCCG
GCACAGAGTCCGACGCGCTCCCTCCCCCGCCCTCGGTCCCCGCCAATGCC
CGCCCAGACGCCAAGGGCCAGGTCTCCTCTGCCTCCACATCTTCCCCCTT
CCCCTCCCAACGCCGCCCCCCCGGCAAGCAGAAGCTCAGCAGCACCATCC
CCATCCTGGGCATCGCCCTCCTCCTCACGGGCCTGGCCGCCCTGATCCCC
TCCGCCCTCCTCTTCCCCGACGCCTCCAGCGCCTCCCTCCTCGCCTCCCT
TCTCGCCCGGCTCCGCCCCCCTCCCGGGATCGAGCCATCTGGCGGTGACC
TCTATTGGCGCATCTTTCTGGCCGGGGGCGTCTGCGCCAGCATCAGCCAC
GGATGGGCCGTGCCCCTGGACGTGGTGAAGACACGCCTGCAGACCGATCC
CGCCCGGTACCAAGGCCTGGGCATATGGGGTGCTTGCGAGAAGATAAGAC
GAGAAGAAGGCCCGGGCATGCTCCTCAAGGGGCTGGGCGCCACCCTGACA
GGGTACTCGATCCAGGGGTCGCTCAAGTATGGGCTGTACGCCATCTTCAA
GAGCGTGGTGACCCGTCTCCTGCCTTCCTCCTCCATCTTCGTCACCTGGG
TTCTGGCCAGCATGATCGCCGACTGCATCGCCAGCACCGCTCTCTGTCCC
CTCGAGGCCACCCGCATCCGCCTCGTAGCCGATCCCTCCTTCGCCTCGGG
CACCTTGGACGGCATCGGACACTTGCTCCGAGAGGAGGGGTGCTCCAGCA
TCTTCAAGGGCATGCCCGCCATCCTGGCCAAACAGCTTCCCTACACCATA
GTTCAACTCTGCGGCTTCGAGCTCATTACACGCGTGTTCTACTCGTGGGA
AGTGACCGCGCGTCTCGTCCACGCCCCCGGGCCCTGGCAGTGGCTCGTCT
CCTTCGGCAGCGCCCTCATCACGGGTGTCTTTGCCTCCATAGCCTCGCAG
CCAGGCGACGTGATTCTTTCGCGGGTAAACAAGACCAAGAGTCATAAGGC
CGTGGTCGAGACCATGCGAGAGGCGGTCCAAGAGCTGGGCCTCCGAGGGC
TCTACAAGGGAACGAGAGCCCGGCTTTTGCACGTGGGCATGATCGTCACC
ATCCAACTCGTCATCTACGACTTTGTCAAGCAGCTGGTCGGCCTCCCGGC
GACAGGCGCGCACTGATGAGACAGAGATTGCCAAGAGCTCTCATTTCTTT
CTCATCCCTCTCACAAATGGAGAGGAACAGGTTTTGGGACACCCATCATT
CTGTCTGACAACATTTTCGTCCCGTCTACGGACGAGCTTGTCAGATCGAT
GGAGAAACCTTGATTAAATGCGTACAAGAAGGACGGTATAAACGGGGGGG
GTACCTCCAAGCGCCTGACCACCACCACCACAAGAGGGAGGGAAGAGGCG
GATTGGGGCGCTGTGTGTAGACTACTAGACTAGAACATCTCCGACACACA
TTTCATACACTGTATTTGAAAAGCTAGGCCCTCTGAAATATCTGCGTCGG
CCTTGGAAGTACGAGCTTGACTTAAGCATGTTGAGCCGCTGAGGTCGACA
GAGGGCGTATCATGAATGTCGACGGGGCAAGGTGCCTGACGTCGTTTGTC
CCATTGGACGAGCTCAGGTCTAGTTGACATTTACGCCACGTTTTGTGAAG
CGAACGTTTCCAGGCGACGATTGAGGTAGACAAAAGAAGGGATAACATCG
CAAGAAAAAC back to topprotein sequence of rna10048 >rna10048-protein ID=rna10048-protein|Name=rna10048|organism=Nannochloropsis gaditana|type=polypeptide|length=267bp
MTRHPRRGPSPRPSFELGTTTNSTVSSSTSSSSSANTGDISTIKRPSTAQ
PWPGRQGSTPRSRTPAASGVPGTGGGGEKDEEANDPLTHESAPTSTTSTT
GSNTSYPVGGSSFLNASKPAGRPACAASRAPSPSPKPYIAGSVPFFSLSS
SALPHVSDPDLALDIPPSFPADIRVPEELLSTHCMASTSSLEGGASVRSL
DPAPSILSFGDSLATDLTAANDPFGLDGGRDGVGFLGPGLGRSDGEGGGA
EGGGWAGRPGWEAEIER back to topmRNA from alignment at KK037260.1:98008..99276+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna10048 ID=rna10048|Name=rna10048|organism=Nannochloropsis gaditana|type=mRNA|length=1269bp|location=Sequence derived from alignment at KK037260.1:98008..99276+ (Nannochloropsis gaditana)
GCGTCAGGAACCGGGCACAGGCGTGGCTCTCGTGATCGACAGGGCATGGC
GAATCACTCGGACATGTGCACTTGTATGGCACCTTGATAAATGGTGCATC
ATTGGTGTTTTGGAAACTGTACTTTCTATTTGTACTAGTAGTGGAGAAGC
TCTAGGTGCTGTCCTCTGCAGTAGGAGCATAAGCCTAGGACGACACCAAA
CAAGTAACGCagttccctccccacgctgCGTCGCCTGTCCCCATGCCTTG
TACTTATGAAGATTTTATTGAAGATTTTAATCCGCTACACGTCAGACTCG
ATGCTAGAGCGCAGTGCCTTCATAGGACTCATTCCCCATACTTGCCCCCT
CCGATAATCACGCCACAGACCACGCGTCCAAGACGGCAGCGACGGGACCA
AGAAATCATCTCTTAACAAATTGTCACCAGTATAATCAAGTGAGACTGGC
TCCCTCTGGTGGCTAAATATGACGCGCCACCCCCGCAGGGGACCctcccc
gcgtccctccttcgAACTTGGCACCACAACCAACAGCACAGTCAGCTCCA
GTACTTCCAGCAGCTCAAGCGCGAATACTGGCGATATAAGTACTATTAAA
AGACCAAGCACGGCCCAACCCTGGCCGGGTAGACAGGGCTCCACCCCCAG
GTCTCGGACCCCGGCTGCGTCTGGCGTGCctgggacgggggggggcggcg
agaaggacgaggaggcgaacgACCCTCTCACGCACGAGAGCGCACCTACA
AGCACCACAAGTACCACGGGCAGCAATACAAGCTACCCCGTGGGCGGGTC
TTCCTTCCTAAACGCTTCAAAGCCGGCGGGGCGCCCTGCCTGCGCCGCAA
GCCgagccccctccccctcgcccaagcCCTACATCGCCGGCTctgtccct
tttttctccctctcctcctctgcactACCCCACGTATCGGACCCCGACCT
TGCCCTGgacattcctccctccttcccagccgATATTCGGGTTCCCGAAG
AGCTCCTCTCCACGCACTGCATGGcctcgacttcctccctcgagggaggg
gcctccGTCCGCTCTCTCGACCCtgcgccctccatcctctcctttggAGA
CTCCCTGGCTACAGACTTGACGGCTGCGAATGACCCGTTCGGTTTGGatg
ggggcagggacggcGTGGGCTTCTTGGGGCCGGGACTGGGGCGTtcggat
ggggagggggggggggcggagggaggaggatgggcaggacggccggggtg
ggaggcggagatAGAGAGG back to topCoding sequence (CDS) from alignment at KK037260.1:98008..99276+ >rna10048 ID=rna10048|Name=rna10048|organism=Nannochloropsis gaditana|type=CDS|length=801bp|location=Sequence derived from alignment at KK037260.1:98008..99276+ (Nannochloropsis gaditana)
ATGACGCGCCACCCCCGCAGGGGACCctccccgcgtccctccttcgAACT
TGGCACCACAACCAACAGCACAGTCAGCTCCAGTACTTCCAGCAGCTCAA
GCGCGAATACTGGCGATATAAGTACTATTAAAAGACCAAGCACGGCCCAA
CCCTGGCCGGGTAGACAGGGCTCCACCCCCAGGTCTCGGACCCCGGCTGC
GTCTGGCGTGCctgggacgggggggggcggcgagaaggacgaggaggcga
acgACCCTCTCACGCACGAGAGCGCACCTACAAGCACCACAAGTACCACG
GGCAGCAATACAAGCTACCCCGTGGGCGGGTCTTCCTTCCTAAACGCTTC
AAAGCCGGCGGGGCGCCCTGCCTGCGCCGCAAGCCgagccccctccccct
cgcccaagcCCTACATCGCCGGCTctgtcccttttttctccctctcctcc
tctgcactACCCCACGTATCGGACCCCGACCTTGCCCTGgacattcctcc
ctccttcccagccgATATTCGGGTTCCCGAAGAGCTCCTCTCCACGCACT
GCATGGcctcgacttcctccctcgagggaggggcctccGTCCGCTCTCTC
GACCCtgcgccctccatcctctcctttggAGACTCCCTGGCTACAGACTT
GACGGCTGCGAATGACCCGTTCGGTTTGGatgggggcagggacggcGTGG
GCTTCTTGGGGCCGGGACTGGGGCGTtcggatggggagggggggggggcg
gagggaggaggatgggcaggacggccggggtgggaggcggagatAGAGAG
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