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Properties
| Property Name | Value |
|---|
| Product | peroxisomal trans-2-enoyl- reductase |
| Orig transcript id | gnl|cribi|Naga_100172g8.4630.mrna |
| Orig protein id | gnl|cribi|Naga_100172g8.4630 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037260.1 | supercontig | KK037260.1:86029..87683 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna10043 ID=rna10043|Name=rna10043|organism=Nannochloropsis gaditana|type=mRNA|length=1115bp
ATGTGACTGCACAGGAAATGAGTGCAAACATTAGAAGGGGCATTACAACA
ACGTGCAGGCTCCTGACAGCAGCGACAGCCGCGCAGAGACGACGAAGTGC
CGCTGAGGCATTTTCAACAGCCCGACCTCTGTCAACACGACGTTATTCCT
CCTCTATCCGACTCCTCACAATCAATCTTTCAACAGCGAAAGGAACATCT
CGCAGCTCAGCTGGCAGAGACTTAATCAGATGTTTCTACCAGAATTCAAG
CCGCCAGCTTTCGTCAACTACGTCCACCTCGCCTTCCGTACAGGCTGCAA
ACCCTCCTCCACCAGCGGCCAAATTTGGACCTCCAAAAGGCGGGCACGCT
TTGTTGCATTTCGGCAACACCTGCGCCTTGTTGAGCTTTTCCATGACAGA
CGTGTTTCTTCTGCGGTCTTTGGCTCTGGTGGCTACGACATGCGGAGTCG
TCTACAATCTGACTCACTCTCCACCCCTTCGCATACCGGCTCTCTGGGGC
ATGGTCTTTCTGGCGGTGAACGGCACCATGATCCTCTCCTTGCTGTTCGA
GGACGAGGAGATCGCCTTTTCCAAGGAGGAGCTCGAGCTCTTCGAGGAGC
ATTTCTTGCCCTACACCCTGACGCCGACCCAGTTCCGGCGCTTGCTGAGC
ACTGCTGAGTGGAAAGACGTGCCCGCCGGCACGGCGCTTGCCGTTGAAGG
AGAGCCGCTGGACAGGCTGGTCCTGATTGCGAGGGGGAAGGTAGCCGCCT
TCGTCAACGGGGTGGGGGCTTGGATCGGCGAGATCAACTTCTTGGATCAA
GAGAAGAAGGCCAAAGGCGCCATCGCTACCTTCGTGGCTGAGAGTCCCGT
TCGATATTTGTGCTGGGAGCATAAGCGTCTACGGGGGCTTTTGAGTGAGG
ACACGAACCTATCCCGGAGTGTGACGCATGCCATCAACGGAGCTTTGATC
GGAAAGCTCCTGTCCTTCACCTCTCACACCAAGGAGGCCAATAGTGAGGC
ATACGAGGAGATCATGGCCACGGTAGGAAGTGCTGGGGAAAGAGATGGAC
GCGTTTTATACAAGGCAGCGCTTCATGAGTCGATCCTCCACTCTTTCACC
ATAGGTGCTAGTTGA back to topprotein sequence of rna10043 >rna10043-protein ID=rna10043-protein|Name=rna10043|organism=Nannochloropsis gaditana|type=polypeptide|length=366bp
MPYKCQCPSQRIKTHNLKVRSMFKACDGRGTTKIFLSIIYTKIPHQICQH
SQHSTPICRSGKCEIHRKCSLMSSLALTPFKAGLFVGKSIIVTGGGTGLG
YAIAKELVSLGAKVVIAARRIEVLEAAASEMNKSSQRGGKIYVCQCNVRN
EDDIQKLVTFALETMGGIDGLVNNAGGQFVSPVENISARGFKAVVETNLL
SCFMLSKEIYNRWWSQQEDRKRSGSIVNIILANKNGFPMMAHSGAARAGV
ENLTKSMALEWIGRGVRVNCVAPGIIYTESGFANYGEMAGAFLSSVLPCI
PAHRCGTAEEVSSLVVFLLSDAAVYITGQNMGVDGGMGQGTIPLRPQDHG
ASLLPVYGELPMKARL back to topmRNA from alignment at KK037260.1:86029..87683+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna10043 ID=rna10043|Name=rna10043|organism=Nannochloropsis gaditana|type=mRNA|length=1655bp|location=Sequence derived from alignment at KK037260.1:86029..87683+ (Nannochloropsis gaditana)
ATGCCTTATAAATGCCAATGTCCGTCCCAACGTATAAAAACTCACAACCT
CAAAGTGAGGAGCATGTTTAAGGCTTGTGACGGTCGAGGAACGACCAAAA
TCTTCTTAAGCATCATATATACCAAAATACCACATCAAATTTGTCAACAT
TCACAGCATTCGACGCCTATCTGCCGTAGTGGCAAGTGCGAGATACACCG
GAAGTGCTCACTCATGTCATCTTTGGCGCTGACTCCCTTCAAGGCTGGCC
TTTTCGTCGGCAAGAGTATCATTGTAACAGGTGGAGGCACTGGCCTTGGA
TATGCTATAGGTAACTTGTGATCAACCAGAGCGTTTAAGTGTGCTTCAGC
AACGAATTGAAAACCACAAAATGGCCCAAATTGTCTTGTACACTGATTGA
CGTGTCCAATTCTACCCTCAAACAGCCAAGGAGCTCGTATCTCTCGGTGC
CAAGGTGGTGATAGCCGCTCGTCGCATTGAAGTGTTGGAAGCAGCTGCCT
CTGAAATGAATAAGTCCTctcaaagaggaggaaagatttATGTGTGTCAG
TGCAATGTCCGTAATGAAGATGACATCCAAAAGCTCGTTACTTTCGCGTT
GGAGACAATGGGAGGGATCGACGGATTGGTGAACAATGCGGGCGGGCAGG
TATGAGCGCCTCTTTTACGCTTGTCTTACCCGTTTACAACGTTCACGAGA
GCATTCAATCCCTTCTTTGATCCCTACCTCCTCACCATGGCCCGGTCAGT
TCGTCAGCCCGGTCGAAAACATCAGTGCCCGTGGGTTCAAAGCCGTCGTC
GAGACCAACTTGCTCTCGTGCTTCATGCTCTCCAAGGAGATTTATAACCG
CTGGTGCGAAGAGAAGATAGGGTAGAGCAGTAGCAAGAAATGGATGGGTC
CTCTTCTCGCTTTGTATCATCCCCTCCGTGTCGAAGCCCCAGACCTCGGC
CTTTTTCCACACACTTTCTGGCTTCTTGACCACCATCCACAGGTGGAGTC
AACAAGAGGATAGGAAGAGGAGTGGATCCATCGTTAATATCATCCTTGCG
AATAAGAATGGTTTTCCCATGATGGCACACAGGTAAGCCCTTCCTTtggt
ccctctccttttttcccgtctcctcctctttttttaaCCTGCCTTCTTCT
ACCCTTTCTACATTCCTTCTTCCACAATCTTCACAAGCGGAGCTGCTCGT
GCGGGTGTGGAAAATCTTACCAAGAGCATGGCCTTAGAATGGATCGGGCG
AGGAGTGCGGGTCAATTGTGTCGCCCCGGGGATTATCTACACAGAGAGCG
GCTTCGCTAATTACGGGTGAGGGCTGCGACaactttccatttcctcgtaC
TCCCTTTTTCTCATCACTTGGCTAAtctctctcgcctccctcaACTGTCC
ATGTACGTTAGTGAGATGGCCggtgctttcctttcctcggtCCTCCCTTG
TATACCCGCCCACCGGTGCGGCACTGCCGAGGAGGTGAGTAGCCTCgtag
tcttcctcctctctgacGCTGCTGTCTATATTACGGGTCAAAATATGGGA
GTGGATGGGGGTATGGGGCAAGGCACTATCCCTCTACGCCCGCAGGACCA
CGGCGCCAGCCTCCTGCCGGTCTATGGAGAGCTGCCCATGAAGGCGAGGC
TTTGA back to topCoding sequence (CDS) from alignment at KK037260.1:86029..87683+ >rna10043 ID=rna10043|Name=rna10043|organism=Nannochloropsis gaditana|type=CDS|length=6606bp|location=Sequence derived from alignment at KK037260.1:86029..87683+ (Nannochloropsis gaditana)
ATGCCTTATAAATGCCAATGTCCGTCCCAACGTATAAAAACTCACAACCT
CAAAGTGAGGAGCATGTTTAAGGCTTGTGACGGTCGAGGAACGACCAAAA
TCTTCTTAAGCATCATATATACCAAAATACCACATCAAATTTGTCAACAT
TCACAGCATTCGACGCCTATCTGCCGTAGTGGCAAGTGCGAGATACACCG
GAAGTGCTCACTCATGTCATCTTTGGCGCTGACTCCCTTCAAGGCTGGCC
TTTTCGTCGGCAAGAGTATCATTGTAACAGGTGGAGGCACTGGCCTTGGA
TATGCTATAGCCAAGGAGCTCGTATCTCTCGGTGCCAAGGTGGTGATAGC
CGCTCGTCGCATTGAAGTGTTGGAAGCAGCTGCCTCTGAAATGAATAAGT
CCTctcaaagaggaggaaagatttATGTGTGTCAGTGCAATGTCCGTAAT
GAAGATGACATCCAAAAGCTCGTTACTTTCGCGTTGGAGACAATGGGAGG
GATCGACGGATTGGTGAACAATGCGGGCGGGCAGTTCGTCAGCCCGGTCG
AAAACATCAGTGCCCGTGGGTTCAAAGCCGTCGTCGAGACCAACTTGCTC
TCGTGCTTCATGCTCTCCAAGGAGATTTATAACCGCTGGTGGAGTCAACA
AGAGGATAGGAAGAGGAGTGGATCCATCGTTAATATCATCCTTGCGAATA
AGAATGGTTTTCCCATGATGGCACACAGCGGAGCTGCTCGTGCGGGTGTG
GAAAATCTTACCAAGAGCATGGCCTTAGAATGGATCGGGCGAGGAGTGCG
GGTCAATTGTGTCGCCCCGGGGATTATCTACACAGAGAGCGGCTTCGCTA
ATTACGGTGAGATGGCCggtgctttcctttcctcggtCCTCCCTTGTATA
CCCGCCCACCGGTGCGGCACTGCCGAGGAGGTGAGTAGCCTCgtagtctt
cctcctctctgacGCTGCTGTCTATATTACGGGTCAAAATATGGGAGTGG
ATGGGGGTATGGGGCAAGGCACTATCCCTCTACGCCCGCAGGACCACGGC
GCCAGCCTCCTGCCGGTCTATGGAGAGCTGCCCATGAAGGCGAGGCTTTG
AATGCCTTATAAATGCCAATGTCCGTCCCAACGTATAAAAACTCACAACC
TCAAAGTGAGGAGCATGTTTAAGGCTTGTGACGGTCGAGGAACGACCAAA
ATCTTCTTAAGCATCATATATACCAAAATACCACATCAAATTTGTCAACA
TTCACAGCATTCGACGCCTATCTGCCGTAGTGGCAAGTGCGAGATACACC
GGAAGTGCTCACTCATGTCATCTTTGGCGCTGACTCCCTTCAAGGCTGGC
CTTTTCGTCGGCAAGAGTATCATTGTAACAGGTGGAGGCACTGGCCTTGG
ATATGCTATAGCCAAGGAGCTCGTATCTCTCGGTGCCAAGGTGGTGATAG
CCGCTCGTCGCATTGAAGTGTTGGAAGCAGCTGCCTCTGAAATGAATAAG
TCCTctcaaagaggaggaaagatttATGTGTGTCAGTGCAATGTCCGTAA
TGAAGATGACATCCAAAAGCTCGTTACTTTCGCGTTGGAGACAATGGGAG
GGATCGACGGATTGGTGAACAATGCGGGCGGGCAGTTCGTCAGCCCGGTC
GAAAACATCAGTGCCCGTGGGTTCAAAGCCGTCGTCGAGACCAACTTGCT
CTCGTGCTTCATGCTCTCCAAGGAGATTTATAACCGCTGGTGGAGTCAAC
AAGAGGATAGGAAGAGGAGTGGATCCATCGTTAATATCATCCTTGCGAAT
AAGAATGGTTTTCCCATGATGGCACACAGCGGAGCTGCTCGTGCGGGTGT
GGAAAATCTTACCAAGAGCATGGCCTTAGAATGGATCGGGCGAGGAGTGC
GGGTCAATTGTGTCGCCCCGGGGATTATCTACACAGAGAGCGGCTTCGCT
AATTACGGTGAGATGGCCggtgctttcctttcctcggtCCTCCCTTGTAT
ACCCGCCCACCGGTGCGGCACTGCCGAGGAGGTGAGTAGCCTCgtagtct
tcctcctctctgacGCTGCTGTCTATATTACGGGTCAAAATATGGGAGTG
GATGGGGGTATGGGGCAAGGCACTATCCCTCTACGCCCGCAGGACCACGG
CGCCAGCCTCCTGCCGGTCTATGGAGAGCTGCCCATGAAGGCGAGGCTTT
GAATGCCTTATAAATGCCAATGTCCGTCCCAACGTATAAAAACTCACAAC
CTCAAAGTGAGGAGCATGTTTAAGGCTTGTGACGGTCGAGGAACGACCAA
AATCTTCTTAAGCATCATATATACCAAAATACCACATCAAATTTGTCAAC
ATTCACAGCATTCGACGCCTATCTGCCGTAGTGGCAAGTGCGAGATACAC
CGGAAGTGCTCACTCATGTCATCTTTGGCGCTGACTCCCTTCAAGGCTGG
CCTTTTCGTCGGCAAGAGTATCATTGTAACAGGTGGAGGCACTGGCCTTG
GATATGCTATAGCCAAGGAGCTCGTATCTCTCGGTGCCAAGGTGGTGATA
GCCGCTCGTCGCATTGAAGTGTTGGAAGCAGCTGCCTCTGAAATGAATAA
GTCCTctcaaagaggaggaaagatttATGTGTGTCAGTGCAATGTCCGTA
ATGAAGATGACATCCAAAAGCTCGTTACTTTCGCGTTGGAGACAATGGGA
GGGATCGACGGATTGGTGAACAATGCGGGCGGGCAGTTCGTCAGCCCGGT
CGAAAACATCAGTGCCCGTGGGTTCAAAGCCGTCGTCGAGACCAACTTGC
TCTCGTGCTTCATGCTCTCCAAGGAGATTTATAACCGCTGGTGGAGTCAA
CAAGAGGATAGGAAGAGGAGTGGATCCATCGTTAATATCATCCTTGCGAA
TAAGAATGGTTTTCCCATGATGGCACACAGCGGAGCTGCTCGTGCGGGTG
TGGAAAATCTTACCAAGAGCATGGCCTTAGAATGGATCGGGCGAGGAGTG
CGGGTCAATTGTGTCGCCCCGGGGATTATCTACACAGAGAGCGGCTTCGC
TAATTACGGTGAGATGGCCggtgctttcctttcctcggtCCTCCCTTGTA
TACCCGCCCACCGGTGCGGCACTGCCGAGGAGGTGAGTAGCCTCgtagtc
ttcctcctctctgacGCTGCTGTCTATATTACGGGTCAAAATATGGGAGT
GGATGGGGGTATGGGGCAAGGCACTATCCCTCTACGCCCGCAGGACCACG
GCGCCAGCCTCCTGCCGGTCTATGGAGAGCTGCCCATGAAGGCGAGGCTT
TGAATGCCTTATAAATGCCAATGTCCGTCCCAACGTATAAAAACTCACAA
CCTCAAAGTGAGGAGCATGTTTAAGGCTTGTGACGGTCGAGGAACGACCA
AAATCTTCTTAAGCATCATATATACCAAAATACCACATCAAATTTGTCAA
CATTCACAGCATTCGACGCCTATCTGCCGTAGTGGCAAGTGCGAGATACA
CCGGAAGTGCTCACTCATGTCATCTTTGGCGCTGACTCCCTTCAAGGCTG
GCCTTTTCGTCGGCAAGAGTATCATTGTAACAGGTGGAGGCACTGGCCTT
GGATATGCTATAGCCAAGGAGCTCGTATCTCTCGGTGCCAAGGTGGTGAT
AGCCGCTCGTCGCATTGAAGTGTTGGAAGCAGCTGCCTCTGAAATGAATA
AGTCCTctcaaagaggaggaaagatttATGTGTGTCAGTGCAATGTCCGT
AATGAAGATGACATCCAAAAGCTCGTTACTTTCGCGTTGGAGACAATGGG
AGGGATCGACGGATTGGTGAACAATGCGGGCGGGCAGTTCGTCAGCCCGG
TCGAAAACATCAGTGCCCGTGGGTTCAAAGCCGTCGTCGAGACCAACTTG
CTCTCGTGCTTCATGCTCTCCAAGGAGATTTATAACCGCTGGTGGAGTCA
ACAAGAGGATAGGAAGAGGAGTGGATCCATCGTTAATATCATCCTTGCGA
ATAAGAATGGTTTTCCCATGATGGCACACAGCGGAGCTGCTCGTGCGGGT
GTGGAAAATCTTACCAAGAGCATGGCCTTAGAATGGATCGGGCGAGGAGT
GCGGGTCAATTGTGTCGCCCCGGGGATTATCTACACAGAGAGCGGCTTCG
CTAATTACGGTGAGATGGCCggtgctttcctttcctcggtCCTCCCTTGT
ATACCCGCCCACCGGTGCGGCACTGCCGAGGAGGTGAGTAGCCTCgtagt
cttcctcctctctgacGCTGCTGTCTATATTACGGGTCAAAATATGGGAG
TGGATGGGGGTATGGGGCAAGGCACTATCCCTCTACGCCCGCAGGACCAC
GGCGCCAGCCTCCTGCCGGTCTATGGAGAGCTGCCCATGAAGGCGAGGCT
TTGAATGCCTTATAAATGCCAATGTCCGTCCCAACGTATAAAAACTCACA
ACCTCAAAGTGAGGAGCATGTTTAAGGCTTGTGACGGTCGAGGAACGACC
AAAATCTTCTTAAGCATCATATATACCAAAATACCACATCAAATTTGTCA
ACATTCACAGCATTCGACGCCTATCTGCCGTAGTGGCAAGTGCGAGATAC
ACCGGAAGTGCTCACTCATGTCATCTTTGGCGCTGACTCCCTTCAAGGCT
GGCCTTTTCGTCGGCAAGAGTATCATTGTAACAGGTGGAGGCACTGGCCT
TGGATATGCTATAGCCAAGGAGCTCGTATCTCTCGGTGCCAAGGTGGTGA
TAGCCGCTCGTCGCATTGAAGTGTTGGAAGCAGCTGCCTCTGAAATGAAT
AAGTCCTctcaaagaggaggaaagatttATGTGTGTCAGTGCAATGTCCG
TAATGAAGATGACATCCAAAAGCTCGTTACTTTCGCGTTGGAGACAATGG
GAGGGATCGACGGATTGGTGAACAATGCGGGCGGGCAGTTCGTCAGCCCG
GTCGAAAACATCAGTGCCCGTGGGTTCAAAGCCGTCGTCGAGACCAACTT
GCTCTCGTGCTTCATGCTCTCCAAGGAGATTTATAACCGCTGGTGGAGTC
AACAAGAGGATAGGAAGAGGAGTGGATCCATCGTTAATATCATCCTTGCG
AATAAGAATGGTTTTCCCATGATGGCACACAGCGGAGCTGCTCGTGCGGG
TGTGGAAAATCTTACCAAGAGCATGGCCTTAGAATGGATCGGGCGAGGAG
TGCGGGTCAATTGTGTCGCCCCGGGGATTATCTACACAGAGAGCGGCTTC
GCTAATTACGGTGAGATGGCCggtgctttcctttcctcggtCCTCCCTTG
TATACCCGCCCACCGGTGCGGCACTGCCGAGGAGGTGAGTAGCCTCgtag
tcttcctcctctctgacGCTGCTGTCTATATTACGGGTCAAAATATGGGA
GTGGATGGGGGTATGGGGCAAGGCACTATCCCTCTACGCCCGCAGGACCA
CGGCGCCAGCCTCCTGCCGGTCTATGGAGAGCTGCCCATGAAGGCGAGGC
TTTGAATGCCTTATAAATGCCAATGTCCGTCCCAACGTATAAAAACTCAC
AACCTCAAAGTGAGGAGCATGTTTAAGGCTTGTGACGGTCGAGGAACGAC
CAAAATCTTCTTAAGCATCATATATACCAAAATACCACATCAAATTTGTC
AACATTCACAGCATTCGACGCCTATCTGCCGTAGTGGCAAGTGCGAGATA
CACCGGAAGTGCTCACTCATGTCATCTTTGGCGCTGACTCCCTTCAAGGC
TGGCCTTTTCGTCGGCAAGAGTATCATTGTAACAGGTGGAGGCACTGGCC
TTGGATATGCTATAGCCAAGGAGCTCGTATCTCTCGGTGCCAAGGTGGTG
ATAGCCGCTCGTCGCATTGAAGTGTTGGAAGCAGCTGCCTCTGAAATGAA
TAAGTCCTctcaaagaggaggaaagatttATGTGTGTCAGTGCAATGTCC
GTAATGAAGATGACATCCAAAAGCTCGTTACTTTCGCGTTGGAGACAATG
GGAGGGATCGACGGATTGGTGAACAATGCGGGCGGGCAGTTCGTCAGCCC
GGTCGAAAACATCAGTGCCCGTGGGTTCAAAGCCGTCGTCGAGACCAACT
TGCTCTCGTGCTTCATGCTCTCCAAGGAGATTTATAACCGCTGGTGGAGT
CAACAAGAGGATAGGAAGAGGAGTGGATCCATCGTTAATATCATCCTTGC
GAATAAGAATGGTTTTCCCATGATGGCACACAGCGGAGCTGCTCGTGCGG
GTGTGGAAAATCTTACCAAGAGCATGGCCTTAGAATGGATCGGGCGAGGA
GTGCGGGTCAATTGTGTCGCCCCGGGGATTATCTACACAGAGAGCGGCTT
CGCTAATTACGGTGAGATGGCCggtgctttcctttcctcggtCCTCCCTT
GTATACCCGCCCACCGGTGCGGCACTGCCGAGGAGGTGAGTAGCCTCgta
gtcttcctcctctctgacGCTGCTGTCTATATTACGGGTCAAAATATGGG
AGTGGATGGGGGTATGGGGCAAGGCACTATCCCTCTACGCCCGCAGGACC
ACGGCGCCAGCCTCCTGCCGGTCTATGGAGAGCTGCCCATGAAGGCGAGG
CTTTGA back to top
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