|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100420g4.1551.mrna |
| Orig protein id | gnl|cribi|Naga_100420g4.1551 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037260.1 | supercontig | KK037260.1:50119..52818 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna10031 ID=rna10031|Name=rna10031|organism=Nannochloropsis gaditana|type=mRNA|length=3828bp
CAGGGCTGCATTTGCGGGTGAATCGTGAGAAAGGGTGGGTGCTCGCGTGG
ATTCAGCCTTGAGACCTCCGCTAGCACCGACGTAATCCATCGAGGCACTC
CAAGCCCGGTAAAAATATGCACAAGCTTTCCGTGTTGCATTCTTACGTTG
GAGTGAGGACTTCTGGAAGAGTAAAGGCTTCACGCTTGGCTACTGCATTG
AAATGGTGACTCGTGTTTGGCTAAAAGTGCGGTTTCGTAGCTATTATACG
AGCATCACTCCTCCGTTCCTGCCATGGTAGCTCCCTCTCTTCTTTTCTCT
CCACTCATGTCTCTGAAATCAACCCTAACGACTCATAGGGTCGTCTCATA
CTTCCTGATAGCAGTCTTGGCACGGTAGCAATGGCGGACGAAGAGCCCGT
CGACACAATGCCTGCGATCAGGGAGGCTGTCAAGCCCAAATGTGCGGCCG
ATTGGAAAGACTACCAGGGGTGCGTGTATCGAATCCAAAGTCGAGGCGAT
GGGACTTGCGAGCCGCAATACATGGAGTGGCTGAAATGCATCGACAAGCA
CAGCGCAAAGCAAGTTCTGAAAGTACTGAAATAGGAACGGTCGCGAGGGA
GGGAGGGAGGGAAGGTGGGAGGGAGGGCAGGGCAGGGAAATTGATTTTCC
TATGTTTTTTCCTGATGCTGAAGCGTATTTTGAATGAGGTTTATAAGTTC
TAACTTAGTAGAGGGTGTAGGGGAAGGCGTGGTCATGGCCTGGAGGGTGG
AGGCACGAGGGGAGAGAAGACGCGTTGGCAGTGGGAGGCGAGTGTAAGGA
TCGGCCGCTTTCTGCACATGAGACAGAGCGAGGCTCCTTGCCTGAGGCAG
GTCGAAGGCCTTCCTTGGCCGTGAAGGGTGACTCGGGCGTGGTTGTGGAC
CGAGAAAGGGCGGGAGAGAGAGGAGACGAGGCAGGGGGAAAGAGGCAGGG
GGAAGAAGAAAAGATTGACTGAACACCACCGTTAGGGTTAAGGAGAGGAA
GGCGAAGGAGAGGCTCGGGGGAAAGGACGCGACGGATCTCCCGGAAACTC
TCCTTCTCGTGTGACCTTGTCTATGGAGAACGCAACCCTAACCGTTACAC
TTTTTTTAATGTCTTTTGACGCGGTCCTTTTAAACACGCCAACAACCCGC
CCTGTGCACGCAGGGAGGGGGAAAGGAGACCCCTCCAGCAACCTGAGAGA
GTGCCTGCAAACCCTTATCCAACCCTAACTCTAACCCTAACCCTAACCCT
ACACCAGACCCTAACCCTAGCCCTTGGGCTCTCAGGAGCGATTCCCGTGA
TCCCACGGACACACTACGCGGAGCCTGAACGCCTGCTTGTCGGGTAAAGA
TGCACGCTCAGACCTTTCTTGCACAAAAGGGCTCATAGCAATCGCTGGGT
CACCTCATCCAAGTCTGTAAAGAGCTCATGGCTCCGCAGCACTAAGGCCT
TCCGCCTCCGCCTCACCTCCTCGTCCCCCCGGACACTGTCCAGGTGCCCC
ATCGCCTTCTCCAAATCGCTCTGTAATTCACCCACTTCCGTCCTCACCTG
TCCTAGCGTCGGCCTCTTCTTTTCTTTCCCTCCCTCCCTCTCCCCCTCCC
TCCCTCCCTCCTTCCTTCCTTCCCTCCTTCCTTCCACGCTCCTCCCCTCG
CGCCCTATTTGGCCGTTCGCCTCTCCTCCTTCCTCCTCTTCGCTTCCTTC
TCTCCCCTCTCCGCCTCCCAGCTTCTCTTCCCCGTTCCCTTCCCTCTTTT
CCTCTTGTTCCAGCCTTTCTAATTCCCTCTCAACGTCGTACTCATCCCAC
TTGTTCTTGAATTTCCTCCCCGACGAACTGAAGTGATAATACGCGCTGGT
GGACGCTGCGCTCTCCCCCTCCTCCTTCTCTCCCTCTCTTCTCCCCCCCT
CCTCCTCCTCTTCATCTCTGCCCTCCTCCTCCTTCCTCAGTGCCTTGTTC
GTGCGCTCCCGCGCCCGTTCGATCCGATCTGCCAACGAGGTCAACTCTGC
CCTCAAAAACTTGAGCTGTCGGAGGGCTACTCTTTTCCTCGCCTTGTCTC
TGTCGCCTTCCCATATGTATGTGAGAGTAGCACGTCCTGAAGAGGTGAGG
GTCAGCCAGCCTATAGCAGCGAGGAGGAGGAAGGAGGTGCTTGTAGCTGT
TGAGGGGAAGCGCATGTCTAGGCTACTGGGATGGATAAGGGGAAAGCGTG
AGCAGAAAAGAGATGGCAAGCTGAGCGCGAGACCGTAAGACCACTTAAAT
ATGATGGCCAGCGATTGAAAGCCCACGGTAGAGGCTGCGGTGTCGCTTGC
ATGTGAGTGGGTACAAGCCAGTATCGCACGGGTCAGCAGGACCGTGTCTA
TGCGGATGAACGACGCTCTTGTAAAATCACGAAAGGGCTGGTGCTCCACC
TCTAGAGTCCAAGACAATCATGTCGGAGGTTTTGTTTGGGTGTCTTTGTG
CCAATGGATAGAGTTAACGTAGTTTCAGCCCTTTTTTCTGCTCCGTGTTG
GTGTAGTCGCAGGACCGTTAAGATGAGGGGCAGGAGGTTGTTCGAGAGCC
TATGGCCCTTTTGGTGTGACGATAAATTTCAAGCATGACAGTGCATCGCC
TTTCTGGAAATACGTCTGCTTCATTCAGTGAGAGAATGTACATGCAGACT
GTCAGCCATGGCCTTTGGGATTTTTGGCTTTCTTTCGTTTGAAGGCGGTT
TGACTGCACGATCCTGATACTCCTTGTTGTTCTACATCTACCACTTTCAT
GTGTCACCATCTCTGTCCTGCCCTCGCGCTCATTACACACCTTCTCTTTT
CAAATTAATCCTTGCAACATCCACATTTAGGTTCCGGCTCGGGCGGGGAG
GGTCCTTTCGTTCTGCCACTGGCGGTGCACCGCTCAAACAGCCCTCCTGA
CTGAGACTCATCCTTACTGAGAGGCGTCAAATCCCCTTTGTGATGGACCG
AACAGTCCACAAGGGCCTTTCAAGCATCTTCCTGATATTTTTCTTCTTCA
TCTCATGCACACGAGCCTTCCTTCTCCCGCTACGCTTCTCTACCTCCTCG
CCCTCTCGTGTCCCTTCCTCCACGTCCTCCCGGCCACTATCCTCTCTCAC
GCTCGATAGCCTCCCGCTCCCCTCAAGCACACGCTGCAGCACCAGCATCT
CAAGAAGACGACACATTTTGTTCGATTTCCGCACTTTTGCGACGCCGCGG
GAGGATTCCACTCCTTCCAACGCCATCACCTCCCTCCTCGTTCGCCTTGG
CTACCAGCCAGAGGAGAACGACGCGGACCCACGGTCCCTCCGCGAGCGAC
TGCAAGATTTTGGGCTGGCAGGTGTTGCGTCCTACATTGCGTCTGAGGTG
TTGTTCTGGTTTATCTCCTTGCCAGTAGGGATCGTCGCCTTCCATCAAAG
CACGGGGGAGTGGCTGGATTTGAGCACGAGTGACGGGCAAGCAAAGGTAG
CAGCTTTTTCTGCAGGCTTCCTCACCTTTGCTCGTGTCGCGCTCCCCCTG
CGTGCTGGCGTTGCCTTCGCCCTTGCCCCTGCACTTAATAAGTATGTGAT
TCGACCCTTGGTGGCCAGGGGCGTGCTAGAAGATAAGGAATGAGGACGAA
AAGCGGAGGGGAGCAGAGGGAACCGTGAGTCGATAGTTGCAATGTGTGCC
GTGGGCTCGAAGGGGAGCAGAGGGAACCGTGAGTCGATTGTTACAAAGTG
TGCCGTGGGCTTTGATGGGAATCGAGGGACTTGACGATAGTGGCAGGTGG
AAGGAAAATAAGTTCTTAATCCGGCAAAATCAACGTTGCACCCTAAATTC
TTTGAGGCAAATTCAGATCGAATGTTGA back to topprotein sequence of rna10031 >rna10031-protein ID=rna10031-protein|Name=rna10031|organism=Nannochloropsis gaditana|type=polypeptide|length=260bp
MRFPSTATSTSFLLLAAIGWLTLTSSGRATLTYIWEGDRDKARKRVALRQ
LKFLRAELTSLADRIERARERTNKALRKEEEGRDEEEEEGGRREGEKEEG
ESAASTSAYYHFSSSGRKFKNKWDEYDVERELERLEQEEKREGNGEEKLG
GGEGREGSEEEEGGEANGQIGREGRSVEGRREGRKEGGREGEREGGKEKK
RPTLGQVRTEVGELQSDLEKAMGHLDSVRGDEEVRRRRKALVLRSHELFT
DLDEVTQRLL back to topmRNA from alignment at KK037260.1:50119..52818+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna10031 ID=rna10031|Name=rna10031|organism=Nannochloropsis gaditana|type=mRNA|length=2700bp|location=Sequence derived from alignment at KK037260.1:50119..52818+ (Nannochloropsis gaditana)
GCCCCTGGCCACCAAGGGTCGAATCACATACTTATTAAGTGCAGGGGCAA
GGGCGAAGGCAACGCCAGCACGCAGGGGGAGCGCGACACGAGCAAAGGTG
AGGAAGCCTGCAGAAAAAGCTGCTACCTGATTTGTCGtatgaaaggggag
gacgcggatggagggcgagcacgGGGTCAGAGAAGGCCGCAATTCTCCGC
GCGCTCGCACAGAAAACCCTGCAGCCACGATAGGACGAGGGATGCAAATG
GAACGCAACCGTCACGGAAGCCATTTGGGATCATTGTCCTCTCCTGTAAT
GGATGTCTCACCTTTGCTTGCCCGTCACTCGTGCTCAAATCCAGCCACTC
CCCCGTGCTTTGATGGAAGGCGACGATCCCTACTGGCAAGGAGATAAACC
AGAACAACACCTCAGACGCAATGTAGGACGCAACACCTGCCAGCCCAAAA
TCTTGCAGTCGCTCGCGGAGGGACCGTGGGTCCGCGTCGTTCTCCTCTGG
CTGGTAGCCAAGgcgaacgaggagggaggtgatggcgtTGGAAGGAGTGG
AATCCTCCCGCGGCGTCGCAAAAGTGCGGAAATCGAACAAAATGTGTCGT
CTTCTTGAGATGCTGGTGCTGCAGCGTGTGCTtgaggggagcgggaggct
aTCGAGCGTGAGAGAGGATAGTGGccgggaggacgtggaggaagggacac
gagagggcgaggaggtagagAAGCGtagcgggagaaggaaggctcGTGTG
CatgagatgaagaagaaaaatatcAGGAAGATGCTTGAAAGGCCCTTGTG
GACTGTTCGGTCCATCACAAAGGGGATTTGACGCCTCTCAGTAAGGATGA
GTCTCAGTCAGGAGGGCTGTTTGAGCGGTGCACCGCCAGTGGCAGAACGA
AaggaccctccccgcccgagCCGGAACCTAAATGTGGATGTTGCAAGGAT
TAATTTGAAAAGAGAAGGTGTGTAATGAGCGCGAGGGCAGGACAGAGATG
GTGACACATGAAAGTGGTAGATGTAGAACAACAAGGAGTATCAGGATCGT
GCAGTCAAACCGCCTTCAAACGAAAGAAAGCCAAAAATCCCAAAGGCCAT
GGCTGACAGTCTGCATGTACATTCTCTCACTGAATGAAGCAGACGTATTT
CCAGAAAGGCGATGCACTGTCATGCTTGAAATTTATCGTCACACCAAAAG
GGCCATAGGCTCTCGaacaacctcctgcccctcatCTTAACGGTCCTGCG
ACTACACCAACACGGAGCAGAAAAAAGGGCTGAAACTACGTTAACTCTAT
CCATTGGCACAAAGACACCCAAACAAAACCTCCGACATGATTGTCTTGGA
CTCTAGAGGTGGAGCACCAGCCCTTTCGTGATTTTACAAGAGCGTCGTTC
ATCCGCATAGACACGGTCCTGCTGACCCGTGCGATACTGGCTTGTACCCA
CTCACATGCAAGCGACACCGCAGCCTCTACCGTGGGCTTTCAATCGCTGG
CCATCATATTTAAGTGGTCTTACGGTCTCGCGCTCAGCTTGCCATCTCTT
TTCTGCTCACGCTTTCCCCTTATCCATCCCAGTAGCCTAGACATGCGCTT
CCCCTCAACAGCTAcaagcacctccttcctcctcctcgctgctaTAGGCT
GGCTGACCCTCACCTCTTCAGGACGTGCTACTCTCACATACATATGGGAA
GGCGACAGAGAcaaggcgaggaaaagagTAGCCCTCCGACAGCTCAAGTT
TTTGAGGGCAGAGTTGACCTCGTTGGCAGATCGGATCGAACGGGCGCGGG
AGCGCACGAACAAGGCactgaggaaggaggaggagggcagagatgaagag
gaggaggagggggggagaagagagggagagaaggaggagggggagagcgc
aGCGTCCACCAGCGCGTATTATCACTTCAGTTCGTCGGGGAGGAAATTCA
AGAACAAGTGGGATGAGTACGACGTTGAGAGGGAATTAGAAAGGCTGGaa
caagaggaaaagagggaagggaacggggaagagaagctgggaggcggaga
ggggagagaaggaagcgaagaggaggaaggaggagaggcgaaCGGCCAAA
Tagggcgcgaggggaggagcgtggaaggaaggagggaaggaaggaaggag
ggagggagggagggggagagggagggagggaaagaaaagaagaggccGAC
GCTAGGACAGGTGAGGACGGAAGTGGGTGAATTACAGAGCGAtttggaga
aggcgatggggcACCTGGACAGTGTccggggggacgaggaggtgaggcgg
aggcggaaggcctTAGTGCTGCGGAGCCATGAGCTCTTTACAGACTTGGA
TGAGGTGACCCAGCGATTGCTATGAGCCCTTTTGTGCAAGAAAGGTCTGA
GCGTGCATCTTTACCCGACAAGCAGGCGTTCAGGCTCCGCGTAGTGTGTC
CGTGGGATCACGGGAATCGCTCCTGAGAGCCCaagggctagggttagggt
cTGGtgtagggttagggttagggttagagTTAGGGTTGGATAAGGGTTTG
CAGGCACTCTCTCAGGTTGCTGGAGgggtctcctttccccctccctgcgt
gCACAGGGCGGGTTGTTGGCGTGTTTAAAAGGACCGCGTCAAAAGACATT
AAAAAAAGTGTAACGGTTAGGGTTGCGTTCTCCATAGACAAGGTCACACG
back to topCoding sequence (CDS) from alignment at KK037260.1:50119..52818+ >rna10031 ID=rna10031|Name=rna10031|organism=Nannochloropsis gaditana|type=CDS|length=783bp|location=Sequence derived from alignment at KK037260.1:50119..52818+ (Nannochloropsis gaditana)
ATGCGCTTCCCCTCAACAGCTAcaagcacctccttcctcctcctcgctgc
taTAGGCTGGCTGACCCTCACCTCTTCAGGACGTGCTACTCTCACATACA
TATGGGAAGGCGACAGAGAcaaggcgaggaaaagagTAGCCCTCCGACAG
CTCAAGTTTTTGAGGGCAGAGTTGACCTCGTTGGCAGATCGGATCGAACG
GGCGCGGGAGCGCACGAACAAGGCactgaggaaggaggaggagggcagag
atgaagaggaggaggagggggggagaagagagggagagaaggaggagggg
gagagcgcaGCGTCCACCAGCGCGTATTATCACTTCAGTTCGTCGGGGAG
GAAATTCAAGAACAAGTGGGATGAGTACGACGTTGAGAGGGAATTAGAAA
GGCTGGaacaagaggaaaagagggaagggaacggggaagagaagctggga
ggcggagaggggagagaaggaagcgaagaggaggaaggaggagaggcgaa
CGGCCAAATagggcgcgaggggaggagcgtggaaggaaggagggaaggaa
ggaaggagggagggagggagggggagagggagggagggaaagaaaagaag
aggccGACGCTAGGACAGGTGAGGACGGAAGTGGGTGAATTACAGAGCGA
tttggagaaggcgatggggcACCTGGACAGTGTccggggggacgaggagg
tgaggcggaggcggaaggcctTAGTGCTGCGGAGCCATGAGCTCTTTACA
GACTTGGATGAGGTGACCCAGCGATTGCTATGA back to top
|