rna10012, rna10012 (mRNA) Nannochloropsis gaditana

Overview
Namerna10012
Unique Namerna10012
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1297
Alignment locationKK037259.1:120286..121143 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100674g1.10417.mrna
Orig protein idgnl|cribi|Naga_100674g1.10417
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:120286..121143 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100674g1gene9714Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20692.1cds9981Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10012rna10012-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10012 ID=rna10012|Name=rna10012|organism=Nannochloropsis gaditana|type=mRNA|length=1297bp
ATAGCCATGCTGATTATTTCGAGCAGGAAACCCCTGAGGACCGCACACGA
GGCTTTTGAGGTAGTTGCAGGGAAATTCACACGGTGCCATTGAAGTGCGA
GGATGGACACCCCAAGCCCTGCTTTCCGCTCTCTTTTCGTCCTGGTGGGC
TCGGGTAACCCAAGCAAGATCGCCGCTGTCCGTCTCGCCTTCCTCTCCCT
CTATTCCTCCCTCGATCCCGAGTCCCTACACGTGGAGGGCTTGCCAGTAG
ATTCAGGTGTCAGCGCACAACCCATCAACGACGAGGAGACGTACCGTGGC
GCGATCATGCGGGCGCAGAACGTCATGCGGTTGTGGAAGGAGAAAGAGGG
GGAAAGGAGGCGAAAAGAAGAAAAACTTGGAGGGCAGATGGTTGAAGGAA
GGGGGGCAGGAAAGAGAGAAGAGCAAGACAAGAGGAAGCGAGGTCAAAAT
GAGCGTCAACAAGGAGAAAAGGGTAAAGAAAGCAACCAATGCACAGGTGG
GACGGGAAAACCATGCGAGATATGCAAGGGGTGCTTACATGTCTGTTCCA
CGGTGGGCGCGGAGGAGGGTAGCCTCCTCCTTCCAGATTACGTGGTGGGC
CTCGAGGGAGGAGTGAAGGAAGAACCTTTCCCGTCCCTTTGTCCTCCCCT
TGCCCCTCCTTCCTCTCCTCCCCTCCATTGCTTCGCATGGATGGCCATTT
TGGAACCGAGGACGGGCCGTTGGAGTGGCGCGAAGACCGCCTCCTTCCCT
CTTCCCGGGATAGTGGCGACCATGGTGCGGGCAGGGGTAGAGCTGGGCGA
GGCCGACGACCGGGTATTCGGGCGGGAAAAAAGCAAGGAAAGAGACGGGG
TGGTGGGCCTCTTGACAGGGGGAATTGTGGACCGGGCCGCGTTTTACGCC
CCGGCGGTGGTGCTGGCGATGATTCCCTTTGGGAGGTATCGAGGGAGGTA
TGCTGGAGGATGAGAGGTGGAGGAAGAACGAGGGTGAGAGGGGGAGGAAG
AAAGGCAGAGAAGGAGGGTGAGAGAGGGAGGAAGAAAGGCAGAGAATAAG
GCATGAACTATCGAGAGGAGGTGGTGAGAGCAGGCAATGGAGCCTGTGGC
CCTCAGGAAAGGAATCTCTCTAGGAGAACGTCTCCTTCCCTTTCCCCACC
GCGGAGCGCGCTTTCACTTGAAAAGGAATGTTCTCGCCAAAGAAATATGT
ATACAAACAGATACATATGGATGTGCAGTCATACTACATATATATATGTA
GTCATCTTCCCGCTCATGTAAATGTCGACGCATCCTTCCCTGGTCGC
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protein sequence of rna10012

>rna10012-protein ID=rna10012-protein|Name=rna10012|organism=Nannochloropsis gaditana|type=polypeptide|length=252bp
LPPPPVSITPLLSYFPSVAVFLRPIKADEILHAILVIPLSPQSLCFHSLL
NLSARFSSTISFSSPPPPPPLPPALPRSPPPSLPPSPPLMWRKPAMPVAC
PLRPLLPPSLPPSLPPPLPPSVTWPDGSRPIPPSPRLLPLLPPPFLPPFL
PPFLVLPMVARGFIPGAANALTGPDRSGREGGREGGEGGTGTDPAPTLLA
LAHGRVFGSRNGGDGRERVNTHGKERERERGAEGREGVRGKKVCDARRAG
QP
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mRNA from alignment at KK037259.1:120286..121143-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10012 ID=rna10012|Name=rna10012|organism=Nannochloropsis gaditana|type=mRNA|length=858bp|location=Sequence derived from alignment at KK037259.1:120286..121143- (Nannochloropsis gaditana)
CTCCCCCCTCCTCCCGTCTCGATTACTCCCTTGTTGTCCTATTTTCCGTC
CGTCGCCGTCTTTTTAAGACCGATAAAGGCGGATGAAATCCTACATGCTA
TTCTGGTGATTCCCCTCTCTCCTCAATCTCTCTGCTTTCACTCTCTCCTC
AATCTCTCTGCCAGATTTTCATCGACGATCTCCTTCTCCTCGCCGCCTCC
TCCTCCTCCCCTTCCTCCTGCCCTCCCTCGCTCGCCTCCTCCCTCTCTAC
CTCCCTCTCCCCCATTGATGTGGAGGAAGCCTGCGATGCCCGTGGCCTGC
CCTTTGCGCCCCCTCCTTCCTCCCTCCCTCCCTCCCTCTCTCCCTCCCCC
TCTCCCTCCTTCCGTTACCTGGCCCGATGGCTCTCGACCTATTCCTCCTT
CACCGCGGCTCCTCCCTCTCCTTCCTCCCCCCTTCCTCCCCCCCTTCCTC
CCCCCCTTCCTCGTACTCCCTATGGTGGCCAGGGGCTTCATCCCAGGTGC
GGCAAACGCTCTTACAGGGCCTGATCGCTCAGGCAGGGAGGGAGGGAGGG
AGGGAGGGGAGGGAGGGACCGGCACGGATCCCGCCCCCACCCTCCTTGCT
CTTGCACATGGCCGCGTTTTTGGATCCAGAAATGGAGGAGATGGGAGGGA
AAGAGTCAACACGCATGGGAAAGAAAGGGAACGAGAGAGAGGTGCAGAAG
GGAGGGAGGGAGTGAGGGGGAAGAAAGTATGTGACGCCCGACGGGCAGGA
CAGCCCTAAATATTATTTAAGAGGGACCATTACATCTCCCTTGACGTGCG
ACCAGGGAAGGATGCGTCGACATTTACATGAGCGGGAAGATGACTACATA
TATATATG
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Coding sequence (CDS) from alignment at KK037259.1:120286..121143-

>rna10012 ID=rna10012|Name=rna10012|organism=Nannochloropsis gaditana|type=CDS|length=759bp|location=Sequence derived from alignment at KK037259.1:120286..121143- (Nannochloropsis gaditana)
CTCCCCCCTCCTCCCGTCTCGATTACTCCCTTGTTGTCCTATTTTCCGTC
CGTCGCCGTCTTTTTAAGACCGATAAAGGCGGATGAAATCCTACATGCTA
TTCTGGTGATTCCCCTCTCTCCTCAATCTCTCTGCTTTCACTCTCTCCTC
AATCTCTCTGCCAGATTTTCATCGACGATCTCCTTCTCCTCGCCGCCTCC
TCCTCCTCCCCTTCCTCCTGCCCTCCCTCGCTCGCCTCCTCCCTCTCTAC
CTCCCTCTCCCCCATTGATGTGGAGGAAGCCTGCGATGCCCGTGGCCTGC
CCTTTGCGCCCCCTCCTTCCTCCCTCCCTCCCTCCCTCTCTCCCTCCCCC
TCTCCCTCCTTCCGTTACCTGGCCCGATGGCTCTCGACCTATTCCTCCTT
CACCGCGGCTCCTCCCTCTCCTTCCTCCCCCCTTCCTCCCCCCCTTCCTC
CCCCCCTTCCTCGTACTCCCTATGGTGGCCAGGGGCTTCATCCCAGGTGC
GGCAAACGCTCTTACAGGGCCTGATCGCTCAGGCAGGGAGGGAGGGAGGG
AGGGAGGGGAGGGAGGGACCGGCACGGATCCCGCCCCCACCCTCCTTGCT
CTTGCACATGGCCGCGTTTTTGGATCCAGAAATGGAGGAGATGGGAGGGA
AAGAGTCAACACGCATGGGAAAGAAAGGGAACGAGAGAGAGGTGCAGAAG
GGAGGGAGGGAGTGAGGGGGAAGAAAGTATGTGACGCCCGACGGGCAGGA
CAGCCCTAA
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Synonyms
Publications