rna10004, rna10004 (mRNA) Nannochloropsis gaditana

Overview
Namerna10004
Unique Namerna10004
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length788
Alignment locationKK037259.1:105173..105451 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100833g3.4293.mrna
Orig protein idgnl|cribi|Naga_100833g3.4293
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:105173..105451 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100833g3gene9706Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20701.1cds9973Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10004rna10004-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10004 ID=rna10004|Name=rna10004|organism=Nannochloropsis gaditana|type=mRNA|length=788bp
CCCCCGCCCTCCCTTCCACCCTCCCTCCCGCTCTCCCTCCCATGCTCCCT
CCGCTATGACAGGAAGTGATTGAAGACGACGATAAGGAGGAGAGGCTCAC
CAGCTCGGCCAGCCAGGCCTCCCGTTTCTCGCTCTTCTCCAAGGTGGTGG
GGGCGGCGGGGGACATTGTGCGGGGCGGGGACTTGGAGGCGGGTAAGAAC
GCGTGAGAACCGGCTTAGGAAGGTGGAAAAGACAGGAAGCAGGAGGCGGA
GGTGTCAGGTCACATGGGCCGCACGCACGTGGGGGAAGAGGGAAGACAAG
GGGGTACGCCGCCTCCAGGGGGCGAACAAGGGGAGGGAGGGAGTGGTGCA
GAGGTTCGAGTCTCGAGGGAGTGGTGCAGAGGTTCGAGTCTCGAGGGAGT
GGTGCAGAGGTTCGAGTCTCGAGGGAGTGGTGCAGAGGTTCGAGTCTCGA
GGGAGTGGTGCAGAGGTTCGAGCCTCGAGGGAGTGGTGCAGAGGTTCGAG
TCTCGGTTGAGACCGGGAGCGGTCCCCGGGTAGGGGCAGGAGAAGGGAAG
GGTCCAGGTATCAAGAGGGGGAGGGGAAAAAAAAGAGATGAAAAGGAAGG
AATTTGGCCGAAATAAAGCCCTTGCGCCACACGAAATCTTTGCTTATGGA
AGCGTGGCACCACGCACTCGAATCCAAGAACAATCTTTGCGTCACCTTAA
GTGTCCTCCTTTTCCCACCCGCGCGCAAAATTTTACCTGCTGGACCACCG
CGACACGTGCACACGCATGAGAAAAGAGACCGAGACCT
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protein sequence of rna10004

>rna10004-protein ID=rna10004-protein|Name=rna10004|organism=Nannochloropsis gaditana|type=polypeptide|length=92bp
MGPQPKQKNRRNGAANDRSRSLFSCVCTCRGGPAGKILRAGGKRRTLKVT
QRLFLDSSAWCHASISKDFVWRKGFISAKFLPFHLFFFPSPS
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mRNA from alignment at KK037259.1:105173..105451-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10004 ID=rna10004|Name=rna10004|organism=Nannochloropsis gaditana|type=mRNA|length=279bp|location=Sequence derived from alignment at KK037259.1:105173..105451- (Nannochloropsis gaditana)
ATGGGACCGCAACCGAAACAAAAGAATAGAAGGAATGGAGCCGCAAATGA
CAGGTCTCGGTCTCTTTTCTCATGCGTGTGCACGTGTCGCGGTGGTCCAG
CAGGTAAAATTTTGCGCGCGGGTGGGAAAAGGAGGACACTTAAGGTGACG
CAAAGATTGTTCTTGGATTCGAGTGCGTGGTGCCACGCTTCCATAAGCAA
AGATTTCGTGTGGCGCAAGGGCTTTATTTCGGCCAAATTCCTTCCTTTTC
ATCTCTTTTTTTTCCCCTCCCCCTCTTGA
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Coding sequence (CDS) from alignment at KK037259.1:105173..105451-

>rna10004 ID=rna10004|Name=rna10004|organism=Nannochloropsis gaditana|type=CDS|length=279bp|location=Sequence derived from alignment at KK037259.1:105173..105451- (Nannochloropsis gaditana)
ATGGGACCGCAACCGAAACAAAAGAATAGAAGGAATGGAGCCGCAAATGA
CAGGTCTCGGTCTCTTTTCTCATGCGTGTGCACGTGTCGCGGTGGTCCAG
CAGGTAAAATTTTGCGCGCGGGTGGGAAAAGGAGGACACTTAAGGTGACG
CAAAGATTGTTCTTGGATTCGAGTGCGTGGTGCCACGCTTCCATAAGCAA
AGATTTCGTGTGGCGCAAGGGCTTTATTTCGGCCAAATTCCTTCCTTTTC
ATCTCTTTTTTTTCCCCTCCCCCTCTTGA
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Synonyms
Publications