Properties
| Property Name | Value |
|---|
| TranscriptId | 674739 |
| Track | FilteredModels2 |
| ProteinId | 674653 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_49 | supercontig | scaffold_49:132570..135153 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9999 ID=mRNA_9999|Name=jgi.p|Nanoce1779_2|674653|organism=Nannochloropsis oceanica|type=mRNA|length=2123bp
GGGGGGAGGGAAGACAGGAGAGTAATTCGGGCTTGCAATCTGCATGGAGG
TATTTACGGGGTTTGTCGATGGGGGGGAAAGGGAGCACTGGGGGAGAGGG
AGAGGCGGGGATGGCGGCGCCGATGCTGGTGAATGGCGTGTCATCAGCGC
TGGAGACGGCGGGAAGAAGGGATGGGCCGACCGGAGGAGATGCAGGGGGT
AGCAGGAGCAGAAACAGCAGCAGTGATAGCAACAGCACTTTGAAAAAGAG
TGTGATCGTGGAGTCTTCTTCCTCCTCTTCCTTGTCCTCGCTTTATCACG
ACCGGAAGCTGAGGGAATTGAAGGGGGGCAACACGGGAGGAAGTCAGGGA
GATGCTGCGGGGCTTGGAAGGACAGTTTGAAGCCGACGTGATGGCACTGG
AAGAGGCTTACGTCCAGCAGAAGAAGCAATTGGAGGAGGCCTTGAGCCAG
TGCAATTAAGGGAGTGGAGGCAGCGAGGGAAAGGATGGTAAGGGCGATAG
AGTTTGTGTAACACTACCATAGCACGGTAGTGGGTGTCAAGGGAGAAGAT
CGAGATTCCCCTGGTTTGTGTCCTGGCTCTATCTTCCTCACTTGTAGGCA
TGCATGTATGCATTTCTAAACGTAGTAGAAGCCGTCTGGCTATGCATTTT
GTATCTAATTCTTGAAGTTGGAAGAAGTCGTAATAATCTACGCTGTTCAT
TGTAGTCGTCCGCCTGACGCTCTCTTCGGCGTCAGGATTTCCCACATATT
TTCTGTCTTATCACCATATATATATATAATGAAACACATTAAAACCACTC
ACAATCGATACACCACGTGGAAATGTCGTTTCTTTTGAGTCACGTCAGGA
ATAGGTGGATTCTGCCTCGAATGGGGTAATTTCATCCACGAAAATGGGCT
CTTCACAGGCACAATGTTTCTCGTGATCCGTACGACAATCAGGCAGTCTC
TCAATTGCAGCTCTGTTTTTTATGTGACATCGACAAAATGAATAGGACCC
CTTTCCACGGAGATCAAGAAGAAGAGTGTGCGTCTAATTCAGAATCATAA
GCTCTCTGCCAAACCCGCCAACAATAAGCCCTTACAAGCTCCCATATGGT
CGTCCACAAGCCCTGTCTTATTTCACTTTTTGTATGCATGACCTCACCAC
AGATTCATTTAAGGCGTGCGAGCACCTCATGCTGGTCTTCTGTTCTCCCG
CACAATCACCAAACAACCATGTGCGCTCCAAAAGAAACTGCCACAGCCAG
TTAACCAGCTGCTCCACCTGATTGTTAGCTTTTAAACTGCATGAAAATAA
ATCAGCCAAAGTTCTAAGAGGATTACTCGGAGCGTGCACGAAGGGAAAAG
AGCCTCAACGGCTCATATAATCAGTATTTTTATCTTCATCTCTACCTCCC
CACGACTTCCTCCCGTGGTCTCGCAATCCACTTCAATACTTCCTCAGGGC
CCGACCAACCACGACAGACAAACACACCCGCTATTTCTCCTTCTTCTTCC
GTTCTCGGATATGGAGGCGCTTGTGGACTTGACCGCACCGTCCACTACGA
CCAAAGTCAGGGTTTCTTCCGTTCTCAATCGCAACGTCAAAGAATTTGGA
GTCGCGCACCTGTTTGATGGAAGCCCTGACACTTGCTGGAACTCAGACCA
GGGCTCGCCGCAGTGGATTTGGCTGCAGTTCCAGCGACCTGTTCACATCC
ATACCATTCAAATTATGTTCCAGGACGCAACTGCAGGAGTACGGCCCAAA
ACAAAAGCAGCCTCCGACCTTGTCACTAGTTTTTGCCCGAACGATGACAA
CAGCTTACAATCATTCCATTTGTCGGAACCCATCGCCGTGACAGCAGCAG
CACTAGCAGTTGGTGAAGCAGGACGTGCAGCAATAGAAGCAGCAGCAGCA
CCAAAACCACCAATGGTGACAGACATGCGCCTGACTTTTTTGAGTAGTTT
TGATTTTTATGGCCGTATCACGGCGTACCAGCTGGCAGTGCTGGGATGGG
AGCAAGGTGAAGAGGAAGGGAGATAGCAGGAGAAAGAGGAGGAGGAGAGG
GAGAAAGACGTTGATGATTAGAAAGCTACAGATTGTAGACAGCAAAAGCA
AGTAACAATACAAGACAAATAAC back to topprotein sequence of jgi.p|Nanoce1779_2|674653 >mRNA_9999-protein ID=mRNA_9999-protein|Name=jgi.p|Nanoce1779_2|674653|organism=Nannochloropsis oceanica|type=polypeptide|length=172bp
MEALVDLTAPSTTTKVRVSSVLNRNVKEFGVAHLFDGSPDTCWNSDQGSP
QWIWLQFQRPVHIHTIQIMFQDATAGVRPKTKAASDLVTSFCPNDDNSLQ
SFHLSEPIAVTAAALAVGEAGRAAIEAAAAPKPPMVTDMRLTFLSSFDFY
GRITAYQLAVLGWEQGEEEGR* back to topmRNA from alignment at scaffold_49:132570..135153- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9999 ID=mRNA_9999|Name=jgi.p|Nanoce1779_2|674653|organism=Nannochloropsis oceanica|type=mRNA|length=2584bp|location=Sequence derived from alignment at scaffold_49:132570..135153- (Nannochloropsis oceanica)
GGGGGGAGGGAAGACAGGAGAGTAATTCGGGCTTGCAATCTGCATGGAGG
TATTTACGGGGTTTGTCGATGGGGGGGAAAGGGAGCACTGGGGGAGAGGG
AGAGGCGGGGATGGCGGCGCCGATGCTGGTGAATGGCGTGTCATCAGCGC
TGGAGACGGCGGGAAGAAGGGATGGGCCGACCGGAGGAGATGCAGGGGGT
AGCAGGAGCAGAAACAGCAGCAGTGATAGCAACAGCACTTTGAAAAAGAG
TGTGATCGTGGAGTCTTCTTCCTCCTCTTCCTTGTCCTCGCTTTATCACG
ACCGGAAGCTGAGGGAATTGAAGGGGGGCAACACGGGAGGAAGTCAGGGA
GATGCTGCGGGGCTTGGAAGGACAGTTTGAAGCCGACGTGATGGCACTGG
AAGAGGCTTACGTCCAGCAGAAGAAGCAATTGGAGGAGGCCTTGAGCCAG
TGCAATTAAGGGAGTGGAGGCAGCGAGGGAAAGGATGGTAAGGGCGATAG
AGTTTGTGTAACACTACCATAGCACGGTAGTGGGTGTCAAGGGAGAAGAT
CGAGATTCCCCTGGTTTGTGTCCTGGCTCTATCTTCCTCACTTGTAGGCA
TGCATGTATGCATTTCTAAACGTAGTAGAAGCCGTCTGGCTATGCATTTT
GTATCTAATTCTTGAAGTTGGAAGAAGTCGTAATAATCTACGCTGTTCAT
TGTAGTCGTCCGCCTGACGCTCTCTTCGGCGTCAGGATTTCCCACATATT
TTCTGTCTTATCACCATATATATATATAATGAAACACATTAAAACCACTC
ACAATCGATACACCACGTGGAAATGTCGTTTCTTTTGAGTCACGTCAGGA
ATAGGTGGATTCTGCCTCGAATGGGGTAATTTCATCCACGAAAATGGGCT
CTTCACAGGCACAATGTTTCTCGTGATCCGTACGACAATCAGGCAGTCTC
TCAATTGCAGCTCTGTTTTTTATGTGACATCGACAAAATGAATAGGACCC
CTTTCCACGGAGATCAAGAAGAAGAGTGTGCGTCTAATTCAGAATCATAA
GCTCTCTGCCAAACCCGCCAACAATAAGCCCTTACAAGCTCCCATATGGT
CGTCCACAAGCCCTGTCTTATTTCACTTTTTGTATGCATGACCTCACCAC
AGATTCATTTAAGGCGTGCGAGCACCTCATGCTGGTCTTCTGTTCTCCCG
CACAATCACCAAACAACCATGTGCGCTCCAAAAGAAACTGCCACAGCCAG
TTAACCAGCTGCTCCACCTGATTGTTAGCTTTTAAACTGCATGAAAATAA
ATCAGCCAAAGTTCTAAGAGGATTACTCGGAGCGTGCACGAAGGGAAAAG
AGCCTCAACGGCTCATATAATCAGTATTTTTATCTTCATCTCTACCTCCC
CACGACTTCCTCCCGTGGTCTCGCAATCCACTTCAATACTTCCTCAGGGC
CCGACCAACCACGACAGACAAACACACCCGCTATTTCTCCTTCTTCTTCC
GTTCTCGGATATGGAGGCGCTTGTGGACTTGACCGCACCGTCCACTACGA
CCAAAGTCAGGTACGTCGATCATCATTATCTCTTGCCCAGGCCCCGCCCC
GCCTTACCTCGCCTTTGCATCCCACGGACCGACTTGCCCGTTCACCTCTT
TATTACACGTCCACTTCCACAGGGTTTCTTCCGTTCTCAATCGCAACGTC
AAAGAATTTGGAGTCGCGCACCTGTTTGATGGAAGCCCTGACACTTGCTG
GAACTCAGACCAGGTGAAAGTCTCCACTTTGAAATAGCATCTCGTTTTTC
ATGGTTTGTCGATGTTGAGGACCCTTTCTCGCAGTCAAAAATATCTTCGT
TGTGCCCTGCACACTCCACCGCATCAGCACTGTCTTGGTCTCTTGATTGC
CTGCTCATCCCCTTGACCCACTTGTCCTCCTCCCTACTCCACAGGGCTCG
CCGCAGTGGATTTGGCTGCAGTTCCAGCGACCTGTTCACATCCATACCAT
TCAAATTATGTTCCAGGGTGGCTTTGCCGCAGAAGAAATGCAAGTGGGCG
TAACTTTTCATACCCCACTTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTCCTTC
TCCCTCCTCCGTCCCACCATTTACATTATTCGAAGACGCAACTGCAGGAG
TACGGCCCAAAACAAAAGCAGCCTCCGACCTTGTCACTAGTTTTTGCCCG
AACGATGACAACAGCTTACAATCATTCCATTTGTCGGAACCCATCGCCGT
GACAGCAGCAGCACTAGCAGTTGGTGAAGCAGGACGTGCAGCAATAGAAG
CAGCAGCAGCACCAAAACCACCAATGGTGACAGACATGCGCCTGACTTTT
TTGAGTAGTTTTGATTTTTATGGCCGTATCACGGCGTACCAGCTGGCAGT
GCTGGGATGGGAGCAAGGTGAAGAGGAAGGGAGATAGCAGGAGAAAGAGG
AGGAGGAGAGGGAGAAAGACGTTGATGATTAGAAAGCTACAGATTGTAGA
CAGCAAAAGCAAGTAACAATACAAGACAAATAAC back to topCoding sequence (CDS) from alignment at scaffold_49:132570..135153- >mRNA_9999 ID=mRNA_9999|Name=jgi.p|Nanoce1779_2|674653|organism=Nannochloropsis oceanica|type=CDS|length=2064bp|location=Sequence derived from alignment at scaffold_49:132570..135153- (Nannochloropsis oceanica)
ACGCAACTGCAGGAGTACGGCCCAAAACAAAAGCAGCCTCCGACCTTGTC
ACTAGTTTTTGCCCGAACGATGACAACAGCTTACAATCATTCCATTTGTC
GGAACCCATCGCCGTGACAGCAGCAGCACTAGCAGTTGGTGAAGCAGGAC
GTGCAGCAATAGAAGCAGCAGCAGCACCAAAACCACCAATGGTGACAGAC
ATGCGCCTGACTTTTTTGAGTAGTTTTGATTTTTATGGCCGTATCACGGC
GTACCAGCTGGCAGTGCTGGGATGGGAGCAAGGTGAAGAGGAAGGGAGAT
AGGGCTCGCCGCAGTGGATTTGGCTGCAGTTCCAGCGACCTGTTCACATC
CATACCATTCAAATTATGTTCCAGGGGTTTCTTCCGTTCTCAATCGCAAC
GTCAAAGAATTTGGAGTCGCGCACCTGTTTGATGGAAGCCCTGACACTTG
CTGGAACTCAGACCAGATGGAGGCGCTTGTGGACTTGACCGCACCGTCCA
CTACGACCAAAGTCAGACGCAACTGCAGGAGTACGGCCCAAAACAAAAGC
AGCCTCCGACCTTGTCACTAGTTTTTGCCCGAACGATGACAACAGCTTAC
AATCATTCCATTTGTCGGAACCCATCGCCGTGACAGCAGCAGCACTAGCA
GTTGGTGAAGCAGGACGTGCAGCAATAGAAGCAGCAGCAGCACCAAAACC
ACCAATGGTGACAGACATGCGCCTGACTTTTTTGAGTAGTTTTGATTTTT
ATGGCCGTATCACGGCGTACCAGCTGGCAGTGCTGGGATGGGAGCAAGGT
GAAGAGGAAGGGAGATAGGGCTCGCCGCAGTGGATTTGGCTGCAGTTCCA
GCGACCTGTTCACATCCATACCATTCAAATTATGTTCCAGGGGTTTCTTC
CGTTCTCAATCGCAACGTCAAAGAATTTGGAGTCGCGCACCTGTTTGATG
GAAGCCCTGACACTTGCTGGAACTCAGACCAGATGGAGGCGCTTGTGGAC
TTGACCGCACCGTCCACTACGACCAAAGTCAGACGCAACTGCAGGAGTAC
GGCCCAAAACAAAAGCAGCCTCCGACCTTGTCACTAGTTTTTGCCCGAAC
GATGACAACAGCTTACAATCATTCCATTTGTCGGAACCCATCGCCGTGAC
AGCAGCAGCACTAGCAGTTGGTGAAGCAGGACGTGCAGCAATAGAAGCAG
CAGCAGCACCAAAACCACCAATGGTGACAGACATGCGCCTGACTTTTTTG
AGTAGTTTTGATTTTTATGGCCGTATCACGGCGTACCAGCTGGCAGTGCT
GGGATGGGAGCAAGGTGAAGAGGAAGGGAGATAGGGCTCGCCGCAGTGGA
TTTGGCTGCAGTTCCAGCGACCTGTTCACATCCATACCATTCAAATTATG
TTCCAGGGGTTTCTTCCGTTCTCAATCGCAACGTCAAAGAATTTGGAGTC
GCGCACCTGTTTGATGGAAGCCCTGACACTTGCTGGAACTCAGACCAGAT
GGAGGCGCTTGTGGACTTGACCGCACCGTCCACTACGACCAAAGTCAGAC
GCAACTGCAGGAGTACGGCCCAAAACAAAAGCAGCCTCCGACCTTGTCAC
TAGTTTTTGCCCGAACGATGACAACAGCTTACAATCATTCCATTTGTCGG
AACCCATCGCCGTGACAGCAGCAGCACTAGCAGTTGGTGAAGCAGGACGT
GCAGCAATAGAAGCAGCAGCAGCACCAAAACCACCAATGGTGACAGACAT
GCGCCTGACTTTTTTGAGTAGTTTTGATTTTTATGGCCGTATCACGGCGT
ACCAGCTGGCAGTGCTGGGATGGGAGCAAGGTGAAGAGGAAGGGAGATAG
GGCTCGCCGCAGTGGATTTGGCTGCAGTTCCAGCGACCTGTTCACATCCA
TACCATTCAAATTATGTTCCAGGGGTTTCTTCCGTTCTCAATCGCAACGT
CAAAGAATTTGGAGTCGCGCACCTGTTTGATGGAAGCCCTGACACTTGCT
GGAACTCAGACCAGATGGAGGCGCTTGTGGACTTGACCGCACCGTCCACT
ACGACCAAAGTCAG back to top
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