|
|
Properties
| Property Name | Value |
| TranscriptId | 522590 |
| Track | FilteredModels2 |
| ProteinId | 522504 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_2 | supercontig | scaffold_2:973783..976122 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_999 ID=mRNA_999|Name=jgi.p|Nanoce1779_2|522504|organism=Nannochloropsis oceanica|type=mRNA|length=2280bp ATGAAAGCAACCGATGCATTGACAACCTCCCCATCCCAGCCTCCCCACCC CCAACAAGACTTGCTACCCAAGCAGTTCCAACAGTTCCAGGATCGGGCGT ACTGGGACGCCTTCTTCCGAGAGCGGAAGCAGGAGGCGTTTGAATGGTAT GGGACCTACGAGGAGCTTCGACCGTTCGTGGCCAAAGCGGTTGAGGGCAG CAAGGGCAAGCAACGGGAGCGGATGCTGGTGATTGGATGCGGCAACTCCG ACTTCTCCACTGAACTATATTGTAAAGGAGGTTACCATCGTGTGACAAAC GTGGATTTCAGCGCGCCGGTTATCGAGGAGATGCAACGAAAAACGCAGGA GTTGTGCCCAGAGATGGAGTGGAAAGTCATGGACGTAACGACAATGTCCA AGGCATTGGGGACGGCCAGCTTCGACGTTGTGCTAGACAAGGGCACGCTG GACGCGATTTTTAGCACGCCTGAAAGTGAAAGACATGCGGATTTGATGCT TGACGAGGTGGGTCACGTGCTTTCTCCAATTTCGGGGCGGTATATGGTAG TGACCCTCGGGCAAGACTTCATTCTGCGAAAGTTGCTGCAACGGTTTGGT GCAGAAGGAGGAGGAGGATGGTGCTTGGCATTGCACGCTGTGGAAGATCC TATGGCGGTTTCACCATTTTTGACGTTAGTAGGCATTGCATTGCGTGTTG GAGTTAGCAAGGAGAGTGACGAGAGGAAAAGCATCAGCGTGTATTTTGAC GCGAGCGGGCGACGGCTTCTGGACAAAGATGCGAAGCATTTCGCTCCAGG AGATCACGCAGACGTCCTGTCATTGGTCACAATGGCACAAGAACGTGCAG CTACCAAACATGAGCTTCGTCAGATTGCTCCTGGGCGTTTTAAGGAAGAG ATCAATATTTGGATTGCACGTCAAGCTGAGCAAGGAGCAGAAGAAGAAGC AGCTGCTGCGAAAAGTCCACGCTATACTCTAAGTATCGTCGATCTCATCC CACCCACCTCCATGCCGTTACCGTGTGCCGTTCTCATAATCCCTCAAGGC CAAGAGCATGACTGGCTCTTCTCTACCGCCGATGGACTGCGGCAGGTGGG GCAAAGCGCAGTCTACCAACGCTTGATTTGCGTACGAATGAATCGAGGGC ATCAATTCAAGGACATGGAAGAAGTGAAAGCTGAGCTTGGGCCTGTCGTG GTTGATTTTGTGCCTGTCGATCGGGATCCTGCTTATTTGGTGCCTTTCCT AGCGGTAGGTGAGTCGATTGGAAGTAGGAGTGCAGTGGTGGCTTCGGGGG ATCTGCCTGACTGCGGGAGGTATTGCGTGGAGGAGGAGGATGATGACGAG GATAGGAAGGACCGAGGGGCAGTGCTGCGCCGCTTGGTATTTTACAGGAA CCAACACGTGATTCAAAGTGAGGTGAGGTTGGTACCCTCTGCTACTTCCT CCTATTCTTCTTCCTCCTCCTCCAAGAAAAATAAAAGCATGGCGGAGCAG CAGAATTGCAACACCACGACTCGCTCCCTTGTAGTCGACTGGTCATATCT CAGTTTCGATTATCACCGTGCTATCCTGGCAGGTCTTATTGCCCTGACTT ATCCCTCCCTCCGTCGTGCCCTCAAAGCTAATGAACAACGACGGTGCTTG GTTATTGGGTTGGGAGGTGGGGGGTTACCGTTGTTTGTTCGAAGATATGT GCCTTGTATGGATGTGACGGTGGTGGAGCTGGAGGGTGGCTTAGCGGCGG TGGCACAAAAATGGTTTGGATTCACTCCTCGGCCTGAGGAAGGATTACAT GTTGATATCGGAAATGGATTGGAGCGGGTGTTGCTTAAAAAGAAGCAAGA GGACGGAGCGGAGGAGATCGAGAAATGGGATAGTATAATTGTCGATGTGG ATAATGCTGACGCGAGCTTGGGTGTCTCTTGCCCAGCGCCTGCTTTTTTG ACACCTGACTTTTTGGAGGCGTGCCGCAAGCGCTTGACTGATGATGGTGG GGTTTTGATCATGAATATAGCGGCCCGATCATCGGAATTGTTGGGTGGAG CAATGGAGGAAGTGGGAAAGGTGTTTGTGGGCGGTGAGGTACATGAGACA CGGCCGACAGAGCAGGATGTAAATCGCGTGGTGTTTGCGTTAAAAACGCC GCGGACTGCGAGTGCTTGTAAGATGTCCTTGGGGTTGCAGGCGGAAAGGT GGCTTGAAGAATGTTTTCCGGGGACTAAGAAGGTAGACCCCCTGGGATTG TGCGAGATGCCGATTTTGAAACGTGCATAG back to topprotein sequence of jgi.p|Nanoce1779_2|522504 >mRNA_999-protein ID=mRNA_999-protein|Name=jgi.p|Nanoce1779_2|522504|organism=Nannochloropsis oceanica|type=polypeptide|length=760bp MKATDALTTSPSQPPHPQQDLLPKQFQQFQDRAYWDAFFRERKQEAFEWY GTYEELRPFVAKAVEGSKGKQRERMLVIGCGNSDFSTELYCKGGYHRVTN VDFSAPVIEEMQRKTQELCPEMEWKVMDVTTMSKALGTASFDVVLDKGTL DAIFSTPESERHADLMLDEVGHVLSPISGRYMVVTLGQDFILRKLLQRFG AEGGGGWCLALHAVEDPMAVSPFLTLVGIALRVGVSKESDERKSISVYFD ASGRRLLDKDAKHFAPGDHADVLSLVTMAQERAATKHELRQIAPGRFKEE INIWIARQAEQGAEEEAAAAKSPRYTLSIVDLIPPTSMPLPCAVLIIPQG QEHDWLFSTADGLRQVGQSAVYQRLICVRMNRGHQFKDMEEVKAELGPVV VDFVPVDRDPAYLVPFLAVGESIGSRSAVVASGDLPDCGRYCVEEEDDDE DRKDRGAVLRRLVFYRNQHVIQSEVRLVPSATSSYSSSSSSKKNKSMAEQ QNCNTTTRSLVVDWSYLSFDYHRAILAGLIALTYPSLRRALKANEQRRCL VIGLGGGGLPLFVRRYVPCMDVTVVELEGGLAAVAQKWFGFTPRPEEGLH VDIGNGLERVLLKKKQEDGAEEIEKWDSIIVDVDNADASLGVSCPAPAFL TPDFLEACRKRLTDDGGVLIMNIAARSSELLGGAMEEVGKVFVGGEVHET RPTEQDVNRVVFALKTPRTASACKMSLGLQAERWLEECFPGTKKVDPLGL CEMPILKRA* back to topmRNA from alignment at scaffold_2:973783..976122+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_999 ID=mRNA_999|Name=jgi.p|Nanoce1779_2|522504|organism=Nannochloropsis oceanica|type=mRNA|length=2340bp|location=Sequence derived from alignment at scaffold_2:973783..976122+ (Nannochloropsis oceanica) ATGAAAGCAACCGATGCATTGACAACCTCCCCATCCCAGCCTCCCCACCC
CCAACAAGACTTGCTACCCAAGCAGTTCCAACAGTTCCAGGATCGGGCGT
ACTGGGACGCCTTCTTCCGAGAGCGGAAGCAGGAGGCGTTTGAATGGTAT
GGGACCTACGAGGAGCTTCGACCGTTCGTGGCCAAAGCGGTTGAGGGCAG
CAAGGGCAAGCAACGGGAGCGGATGCTGGTGATTGGATGCGGCAACTCCG
ACTTCTCCACTGAACTATATTGTAAAGGAGGTTACCATCGTGTGACAAAC
GTGGATTTCAGCGCGCCGGTTATCGAGGAGATGCAACGAAAAACGCAGGA
GTTGTGCCCAGAGATGGAGTGGAAAGTCATGGACGTAACGACAATGTCCA
AGGCATTGGGGACGGCCAGCTTCGACGTTGTGCTAGACAAGGGCACGCTG
GACGCGATTTTTAGCACGCCTGAAAGTGAAAGACATGCGGATTTGATGCT
TGACGAGGTGGGTCACGTGCTTTCTCCAATTTCGGGGCGGTATATGGTAG
TGACCCTCGGGCAAGACTTCATTCTGCGAAAGTTGCTGCAACGGTTTGGT
GCAGAAGGAGGAGGAGGATGGTGCTTGGCATTGCACGCTGTGGAAGATCC
TATGGCGGTTTCACCATTTTTGACGTTAGTAGGCATTGCATTGCGTGTTG
GAGTTAGCAAGGAGAGTGACGAGAGGAAAAGCATCAGCGTGTATTTTGAC
GCGAGCGGGCGACGGCTTCTGGACAAAGATGCGAAGCATTTCGCTCCAGG
AGATCACGCAGACGTCCTGTCATTGGTCACAATGGCACAAGAACGTGCAG
CTACCAAACATGAGCTTCGTCAGATTGCTCCTGGGCGTTTTAAGGAAGAG
ATCAATATTTGGATTGCACGTCAAGCTGAGCAAGGAGCAGAAGAAGAAGC
AGCTGCTGCGAAAAGTCCACGCTATACTCTAAGTATCGTCGATCTCATCC
CACCCACCTCCATGCCGTTACCGTGTGCCGTTCTCATAATCCCTCAAGGC
CAAGAGCATGACTGGCTCTTCTCTACCGCCGATGGACTGCGGCAGGTGGG
GCAAAGCGCAGTCTACCAACGCTTGATTTGCGTACGAATGAATCGAGGGC
ATCAATTCAAGGACATGGAAGAAGTGAAAGCTGAGCTTGGGCCTGTCGTG
GTTGATTTTGTGCCTGTCGATCGGGATCCTGCTTATTTGGTGCCTTTCCT
AGCGGTAGGTGAGTCGATTGGAAGTAGGAGTGCAGTGGTGGCTTCGGGGG
ATCTGCCTGACTGCGGGAGGTATTGCGTGGAGGAGGAGGATGATGACGAG
GATAGGAAGGACCGAGGGGCAGTGCTGCGCCGCTTGGTATTTTACAGGAA
CCAACACGTGATTCAAAGTGAGGTGAGGTTGGTACCCTCTGCTACTTCCT
CCTATTCTTCTTCCTCCTCCTCCAAGAAAAATAAAAGCAGTGGAAAGAAG
AAGGGAAAAAACGGCACCAGCAAAAAAAAAGCAGACCACGCACAGGAAGT
GGCGGAGCAGCAGAATTGCAACACCACGACTCGCTCCCTTGTAGTCGACT
GGTCATATCTCAGTTTCGATTATCACCGTGCTATCCTGGCAGGTCTTATT
GCCCTGACTTATCCCTCCCTCCGTCGTGCCCTCAAAGCTAATGAACAACG
ACGGTGCTTGGTTATTGGGTTGGGAGGTGGGGGGTTACCGTTGTTTGTTC
GAAGATATGTGCCTTGTATGGATGTGACGGTGGTGGAGCTGGAGGGTGGC
TTAGCGGCGGTGGCACAAAAATGGTTTGGATTCACTCCTCGGCCTGAGGA
AGGATTACATGTTGATATCGGAAATGGATTGGAGCGGGTGTTGCTTAAAA
AGAAGCAAGAGGACGGAGCGGAGGAGATCGAGAAATGGGATAGTATAATT
GTCGATGTGGATAATGCTGACGCGAGCTTGGGTGTCTCTTGCCCAGCGCC
TGCTTTTTTGACACCTGACTTTTTGGAGGCGTGCCGCAAGCGCTTGACTG
ATGATGGTGGGGTTTTGATCATGAATATAGCGGCCCGATCATCGGAATTG
TTGGGTGGAGCAATGGAGGAAGTGGGAAAGGTGTTTGTGGGCGGTGAGGT
ACATGAGACACGGCCGACAGAGCAGGATGTAAATCGCGTGGTGTTTGCGT
TAAAAACGCCGCGGACTGCGAGTGCTTGTAAGATGTCCTTGGGGTTGCAG
GCGGAAAGGTGGCTTGAAGAATGTTTTCCGGGGACTAAGAAGGTAGACCC
CCTGGGATTGTGCGAGATGCCGATTTTGAAACGTGCATAG back to topCoding sequence (CDS) from alignment at scaffold_2:973783..976122+ >mRNA_999 ID=mRNA_999|Name=jgi.p|Nanoce1779_2|522504|organism=Nannochloropsis oceanica|type=CDS|length=4560bp|location=Sequence derived from alignment at scaffold_2:973783..976122+ (Nannochloropsis oceanica) ATGAAAGCAACCGATGCATTGACAACCTCCCCATCCCAGCCTCCCCACCC CCAACAAGACTTGCTACCCAAGCAGTTCCAACAGTTCCAGGATCGGGCGT ACTGGGACGCCTTCTTCCGAGAGCGGAAGCAGGAGGCGTTTGAATGGTAT GGGACCTACGAGGAGCTTCGACCGTTCGTGGCCAAAGCGGTTGAGGGCAG CAAGGGCAAGCAACGGGAGCGGATGCTGGTGATTGGATGCGGCAACTCCG ACTTCTCCACTGAACTATATTGTAAAGGAGGTTACCATCGTGTGACAAAC GTGGATTTCAGCGCGCCGGTTATCGAGGAGATGCAACGAAAAACGCAGGA GTTGTGCCCAGAGATGGAGTGGAAAGTCATGGACGTAACGACAATGTCCA AGGCATTGGGGACGGCCAGCTTCGACGTTGTGCTAGACAAGGGCACGCTG GACGCGATTTTTAGCACGCCTGAAAGTGAAAGACATGCGGATTTGATGCT TGACGAGGTGGGTCACGTGCTTTCTCCAATTTCGGGGCGGTATATGGTAG TGACCCTCGGGCAAGACTTCATTCTGCGAAAGTTGCTGCAACGGTTTGGT GCAGAAGGAGGAGGAGGATGGTGCTTGGCATTGCACGCTGTGGAAGATCC TATGGCGGTTTCACCATTTTTGACGTTAGTAGGCATTGCATTGCGTGTTG GAGTTAGCAAGGAGAGTGACGAGAGGAAAAGCATCAGCGTGTATTTTGAC GCGAGCGGGCGACGGCTTCTGGACAAAGATGCGAAGCATTTCGCTCCAGG AGATCACGCAGACGTCCTGTCATTGGTCACAATGGCACAAGAACGTGCAG CTACCAAACATGAGCTTCGTCAGATTGCTCCTGGGCGTTTTAAGGAAGAG ATCAATATTTGGATTGCACGTCAAGCTGAGCAAGGAGCAGAAGAAGAAGC AGCTGCTGCGAAAAGTCCACGCTATACTCTAAGTATCGTCGATCTCATCC CACCCACCTCCATGCCGTTACCGTGTGCCGTTCTCATAATCCCTCAAGGC CAAGAGCATGACTGGCTCTTCTCTACCGCCGATGGACTGCGGCAGGTGGG GCAAAGCGCAGTCTACCAACGCTTGATTTGCGTACGAATGAATCGAGGGC ATCAATTCAAGGACATGGAAGAAGTGAAAGCTGAGCTTGGGCCTGTCGTG GTTGATTTTGTGCCTGTCGATCGGGATCCTGCTTATTTGGTGCCTTTCCT AGCGGTAGGTGAGTCGATTGGAAGTAGGAGTGCAGTGGTGGCTTCGGGGG ATCTGCCTGACTGCGGGAGGTATTGCGTGGAGGAGGAGGATGATGACGAG GATAGGAAGGACCGAGGGGCAGTGCTGCGCCGCTTGGTATTTTACAGGAA CCAACACGTGATTCAAAGTGAGGTGAGGTTGGTACCCTCTGCTACTTCCT CCTATTCTTCTTCCTCCTCCTCCAAGAAAAATAAAAGCATGGCGGAGCAG CAGAATTGCAACACCACGACTCGCTCCCTTGTAGTCGACTGGTCATATCT CAGTTTCGATTATCACCGTGCTATCCTGGCAGGTCTTATTGCCCTGACTT ATCCCTCCCTCCGTCGTGCCCTCAAAGCTAATGAACAACGACGGTGCTTG GTTATTGGGTTGGGAGGTGGGGGGTTACCGTTGTTTGTTCGAAGATATGT GCCTTGTATGGATGTGACGGTGGTGGAGCTGGAGGGTGGCTTAGCGGCGG TGGCACAAAAATGGTTTGGATTCACTCCTCGGCCTGAGGAAGGATTACAT GTTGATATCGGAAATGGATTGGAGCGGGTGTTGCTTAAAAAGAAGCAAGA GGACGGAGCGGAGGAGATCGAGAAATGGGATAGTATAATTGTCGATGTGG ATAATGCTGACGCGAGCTTGGGTGTCTCTTGCCCAGCGCCTGCTTTTTTG ACACCTGACTTTTTGGAGGCGTGCCGCAAGCGCTTGACTGATGATGGTGG GGTTTTGATCATGAATATAGCGGCCCGATCATCGGAATTGTTGGGTGGAG CAATGGAGGAAGTGGGAAAGGTGTTTGTGGGCGGTGAGGTACATGAGACA CGGCCGACAGAGCAGGATGTAAATCGCGTGGTGTTTGCGTTAAAAACGCC GCGGACTGCGAGTGCTTGTAAGATGTCCTTGGGGTTGCAGGCGGAAAGGT GGCTTGAAGAATGTTTTCCGGGGACTAAGAAGGTAGACCCCCTGGGATTG TGCGAGATGCCGATTTTGAAACGTGCATAGATGAAAGCAACCGATGCATT GACAACCTCCCCATCCCAGCCTCCCCACCCCCAACAAGACTTGCTACCCA AGCAGTTCCAACAGTTCCAGGATCGGGCGTACTGGGACGCCTTCTTCCGA GAGCGGAAGCAGGAGGCGTTTGAATGGTATGGGACCTACGAGGAGCTTCG ACCGTTCGTGGCCAAAGCGGTTGAGGGCAGCAAGGGCAAGCAACGGGAGC GGATGCTGGTGATTGGATGCGGCAACTCCGACTTCTCCACTGAACTATAT TGTAAAGGAGGTTACCATCGTGTGACAAACGTGGATTTCAGCGCGCCGGT TATCGAGGAGATGCAACGAAAAACGCAGGAGTTGTGCCCAGAGATGGAGT GGAAAGTCATGGACGTAACGACAATGTCCAAGGCATTGGGGACGGCCAGC TTCGACGTTGTGCTAGACAAGGGCACGCTGGACGCGATTTTTAGCACGCC TGAAAGTGAAAGACATGCGGATTTGATGCTTGACGAGGTGGGTCACGTGC TTTCTCCAATTTCGGGGCGGTATATGGTAGTGACCCTCGGGCAAGACTTC ATTCTGCGAAAGTTGCTGCAACGGTTTGGTGCAGAAGGAGGAGGAGGATG GTGCTTGGCATTGCACGCTGTGGAAGATCCTATGGCGGTTTCACCATTTT TGACGTTAGTAGGCATTGCATTGCGTGTTGGAGTTAGCAAGGAGAGTGAC GAGAGGAAAAGCATCAGCGTGTATTTTGACGCGAGCGGGCGACGGCTTCT GGACAAAGATGCGAAGCATTTCGCTCCAGGAGATCACGCAGACGTCCTGT CATTGGTCACAATGGCACAAGAACGTGCAGCTACCAAACATGAGCTTCGT CAGATTGCTCCTGGGCGTTTTAAGGAAGAGATCAATATTTGGATTGCACG TCAAGCTGAGCAAGGAGCAGAAGAAGAAGCAGCTGCTGCGAAAAGTCCAC GCTATACTCTAAGTATCGTCGATCTCATCCCACCCACCTCCATGCCGTTA CCGTGTGCCGTTCTCATAATCCCTCAAGGCCAAGAGCATGACTGGCTCTT CTCTACCGCCGATGGACTGCGGCAGGTGGGGCAAAGCGCAGTCTACCAAC GCTTGATTTGCGTACGAATGAATCGAGGGCATCAATTCAAGGACATGGAA GAAGTGAAAGCTGAGCTTGGGCCTGTCGTGGTTGATTTTGTGCCTGTCGA TCGGGATCCTGCTTATTTGGTGCCTTTCCTAGCGGTAGGTGAGTCGATTG GAAGTAGGAGTGCAGTGGTGGCTTCGGGGGATCTGCCTGACTGCGGGAGG TATTGCGTGGAGGAGGAGGATGATGACGAGGATAGGAAGGACCGAGGGGC AGTGCTGCGCCGCTTGGTATTTTACAGGAACCAACACGTGATTCAAAGTG AGGTGAGGTTGGTACCCTCTGCTACTTCCTCCTATTCTTCTTCCTCCTCC TCCAAGAAAAATAAAAGCATGGCGGAGCAGCAGAATTGCAACACCACGAC TCGCTCCCTTGTAGTCGACTGGTCATATCTCAGTTTCGATTATCACCGTG CTATCCTGGCAGGTCTTATTGCCCTGACTTATCCCTCCCTCCGTCGTGCC CTCAAAGCTAATGAACAACGACGGTGCTTGGTTATTGGGTTGGGAGGTGG GGGGTTACCGTTGTTTGTTCGAAGATATGTGCCTTGTATGGATGTGACGG TGGTGGAGCTGGAGGGTGGCTTAGCGGCGGTGGCACAAAAATGGTTTGGA TTCACTCCTCGGCCTGAGGAAGGATTACATGTTGATATCGGAAATGGATT GGAGCGGGTGTTGCTTAAAAAGAAGCAAGAGGACGGAGCGGAGGAGATCG AGAAATGGGATAGTATAATTGTCGATGTGGATAATGCTGACGCGAGCTTG GGTGTCTCTTGCCCAGCGCCTGCTTTTTTGACACCTGACTTTTTGGAGGC GTGCCGCAAGCGCTTGACTGATGATGGTGGGGTTTTGATCATGAATATAG CGGCCCGATCATCGGAATTGTTGGGTGGAGCAATGGAGGAAGTGGGAAAG GTGTTTGTGGGCGGTGAGGTACATGAGACACGGCCGACAGAGCAGGATGT AAATCGCGTGGTGTTTGCGTTAAAAACGCCGCGGACTGCGAGTGCTTGTA AGATGTCCTTGGGGTTGCAGGCGGAAAGGTGGCTTGAAGAATGTTTTCCG GGGACTAAGAAGGTAGACCCCCTGGGATTGTGCGAGATGCCGATTTTGAA ACGTGCATAG back to top
|