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Properties
| Property Name | Value |
|---|
| TranscriptId | 610419 |
| Track | FilteredModels2 |
| ProteinId | 610333 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_49 | supercontig | scaffold_49:81692..83876 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9981 ID=mRNA_9981|Name=jgi.p|Nanoce1779_2|610333|organism=Nannochloropsis oceanica|type=mRNA|length=1355bp
AGGTCAAGCGAGACCCCTTAAAAAAATGCGTGCGAGCCTCGCGACGGCCA
CGACGGCCGCAGCCGTGCTGCTCCTAGCACTTCCGAGCACGTCCAACGCC
CTCGCTTCCTCCGCCCGTCCCCGTGCCATGACAACCGGATACCTTCACCA
ACCCATGGCAAGCGTGGGGGGCAGCCGCCGCTTGAATGCCTTGGCAATGG
CCCGTCGCACCGCTCACTTGTACCAACGCAGCGTCGTGGCCATGTCAGCC
GCCGCCCCCACCAAGAAGGAAGAGACGGGCATCGGGTGGAACTCACATAA
GCCCGTGACTGAAGTGCCCGAATCCTTGGTCCGTGGCGTGGAAGGAAATG
AGAGCATGCGTCGCCGGTTTGAGAAGGCCTGCCGGGAGGCGCAGTTGGCC
ATCTGCAAGGCCGTGGAAGAATGCGACGGGGGTGCCAAGTTCCATTCCGA
CGCCTGGATTCGTGCCGATGGCGGGGGAGGGATATCAATGGTCCTCGGTG
ATGGGAAGGTCTGGGAGAAGGCAGGTTGTAACCTGTCGGTGGTGTATGGG
AGCATGCCTCAGGAGGCGCTGCAGGCGGCGACGGAGAGGGGGGTAGATAG
GGCGAAGGGGATGAAGCCGGGCGAGCGGGTGCCTTTCTTTGCCTGCGGTT
TGAGCTCCGTCATGCACCCTAGGAACCCGCACTGTCCGACCATGCACTTC
AACTACCGTTACTTCGAGACAGAGGGCGGGGCTTGGTGGTTCGGCGGGGG
CATGGACATAACTCCCTCCTACCTGGACACCGACGACATGAAGCATTTCC
ACGGCACCTTGAAGGAAGTGTGCGACAAGCACGACGAGGGGTATTACCCC
AAATTTAAAAAATGGGCCGACGAATATTTTTTGATCAAGCACAGGGGCGA
GACGCGCGGCTTGGGTGGTGTTTTTTTCGACGACCAGAACGATAAGTCTC
CTGATGAGCATTTCGCCTTTTCGGAGGAGATGCTGAATACGGTGACTAAG
GCGTATTTGCCCATCATCGAGAAGCATAAGAACGATGCCTTCACCGAGGA
ACAGAAGAAGTGGCAGCAGATCCGGCGTGGCCGTTACACGGAGTTTAATT
TGGTGTATGACAGAGGGACGGTGTTCGGGTTAAAGACGGGAGGGAGGATT
GAGAGTATCCTCATGTCGCTGCCGGAGACGGCTCGATGGGAGTATGACCA
CCACCCGGCGGAAGGGAGCCCAGAGGCGGAGATCATGGATGCGTTTAAGA
ACGCGAGGGAATGGGTTTGAGGAGGAGGGAGGGAGGAAGGGAGGAAGGGA
GGGAGCAGAGGAGCGTTGTGGTGAGGGAGGAGAATGGGATAACAACGTTT
GGAGA back to topprotein sequence of jgi.p|Nanoce1779_2|610333 >mRNA_9981-protein ID=mRNA_9981-protein|Name=jgi.p|Nanoce1779_2|610333|organism=Nannochloropsis oceanica|type=polypeptide|length=415bp
MRASLATATTAAAVLLLALPSTSNALASSARPRAMTTGYLHQPMASVGGS
RRLNALAMARRTAHLYQRSVVAMSAAAPTKKEETGIGWNSHKPVTEVPES
LVRGVEGNESMRRRFEKACREAQLAICKAVEECDGGAKFHSDAWIRADGG
GGISMVLGDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGMKPGE
RVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYL
DTDDMKHFHGTLKEVCDKHDEGYYPKFKKWADEYFLIKHRGETRGLGGVF
FDDQNDKSPDEHFAFSEEMLNTVTKAYLPIIEKHKNDAFTEEQKKWQQIR
RGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHHPAEGSPE
AEIMDAFKNAREWV* back to topmRNA from alignment at scaffold_49:81692..83876- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9981 ID=mRNA_9981|Name=jgi.p|Nanoce1779_2|610333|organism=Nannochloropsis oceanica|type=mRNA|length=2185bp|location=Sequence derived from alignment at scaffold_49:81692..83876- (Nannochloropsis oceanica)
AGGTCAAGCGAGACCCCTTAAAAAAATGCGTGCGAGCCTCGCGACGGCCA
CGACGGCCGCAGCCGTGCTGCTCCTAGCACTTCCGAGCACGTCCAACGCC
CTCGCTTCCTCCGCCCGTCCCCGTGCCATGACAACCGGATACCTTCACCA
ACCCATGGCAAGCGTGGGGGGCAGCCGCCGCTTGAATGCCTTGGCAATGG
CCCGTCGCACCGCTCACTTGTACCAACGCAGCGTCGTGGCCATGTCAGCC
GCCGCCCCCACCAAGAAGGAAGAGACGGGCATCGGGTGGAACTCACATAA
GCCCGTGACTGAAGTGCCCGAATCCTTGGTCCGTGGCGTGGAAGGAAATG
AGAGCATGCGTCGCCGGTTTGAGAAGGCCTGCCGGGAGGCGCAGGTAGGG
AGAGAGGAAGGGAGGGAGGGAGGGAGGAGGAAACCATATGTTGCAGCAAT
GGGGGGGTATATGCATGTTCGGGGGCAAACCACCCACGAGAGGCAATACA
CAGACACATCAGACCATCAGTCCATCCACCTTCCCCGTGCAATCTTTTAC
TCAAGCACACTTCACCGACGAGGTCTCTACCTCTGAAGTCGTCGAGGAAA
GCGACAGAAGGGCACTGGGTTTCTCCGTCCCTCCCGATTTAACGCCCTGC
CGTTTCGACACATGCACAACTCACGCTTTCACTCCTCTCATTCATTCGCC
TGTCCTTCCCCCCCCCTTCCCCTTCTGTCACCTTCCGTTCTCGTCAAAAG
TTGGCCATCTGCAAGGCCGTGGAAGAATGCGACGGGGGTGCCAAGTTCCA
TTCCGACGCCTGGATTCGTGCCGATGGCGGGGGAGGGATATCAATGGTCC
TCGGTGATGGGAAGGTCTGGGAGAAGGCAGGTTGTAACCTGTCGGTGGTG
TATGGGAGCATGCCTCAGGAGGCGCTGCAGGCGGCGACGGAGAGGGGGGT
AGATAGGGCGAAGGGGATGAAGCCGGGTGAGTGCCGAGAGAGAGGGAGGG
AGGGAATGAGTACCGATGTTGGCGTGTGAGCATAAAGAGAGCTAAGCAAC
TGCACGTCTGTGGGGAGGGGATATATGTGGGGGGGATGTACGCATGGGTG
TGGGCGGCTTTTACCGGCCCATTCGCAATCTTTTTCTCATGCATTAATGC
GGTCTTTTCTCTATGCCAATACAATACACACTCAAAGATATAAATATGGG
TAGCACGACAAACACCCACTTACTAATACTCACTAACACACACAAACAGG
CGAGCGGGTGCCTTTCTTTGCCTGCGGTTTGAGCTCCGTCATGCACCCTA
GGGTAGGTACATATCAAATCAAACCAAAGGAGGGAGGAGAGGAGGCAGAG
AGGGATGGAGGATGAAGCTGGTAATGCCATTGGAAAAGGGTTGACGCCCA
TGTAATTTGTGTCTTCAGTGTTGACTGCTGAAACCGGAAACAACATTCTG
GGCTAACCTCACCGATTTCTTGCCCCCTCCCTCCCTCCCTCCCTTCTTCC
CAGAACCCGCACTGTCCGACCATGCACTTCAACTACCGTTACTTCGAGAC
AGAGGGCGGGGCTTGGTGGTTCGGCGGGGGCATGGACATAACTCCCTCCT
ACCTGGACACCGACGACATGAAGCATTTCCACGGCACCTTGAAGGAAGTG
TGCGACAAGCACGACGAGGGGTATTACCCCAAATTTAAAAAATGGGCCGA
CGAATATTTTTTGATCAAGCACAGGGGCGAGACGCGCGGCTTGGGTGGTG
TTTTTTTCGACGACCAGAACGATAAGTCTCCTGATGAGCATTTCGCCTTT
TCGGAGGAGATGCTGAATACGGTGACTAAGGCGTATTTGCCCATCATCGA
GAAGCATAAGAACGATGCCTTCACCGAGGAACAGAAGAAGTGGCAGCAGA
TCCGGCGTGGCCGTTACACGGAGTTTAATTTGGTGTATGACAGAGGGACG
GTGTTCGGGTTAAAGACGGGAGGGAGGATTGAGAGTATCCTCATGTCGCT
GCCGGAGACGGCTCGATGGGAGTATGACCACCACCCGGCGGAAGGGAGCC
CAGAGGCGGAGATCATGGATGCGTTTAAGAACGCGAGGGAATGGGTTTGA
GGAGGAGGGAGGGAGGAAGGGAGGAAGGGAGGGAGCAGAGGAGCGTTGTG
GTGAGGGAGGAGAATGGGATAACAACGTTTGGAGA back to topCoding sequence (CDS) from alignment at scaffold_49:81692..83876- >mRNA_9981 ID=mRNA_9981|Name=jgi.p|Nanoce1779_2|610333|organism=Nannochloropsis oceanica|type=CDS|length=4980bp|location=Sequence derived from alignment at scaffold_49:81692..83876- (Nannochloropsis oceanica)
AACCCGCACTGTCCGACCATGCACTTCAACTACCGTTACTTCGAGACAGA
GGGCGGGGCTTGGTGGTTCGGCGGGGGCATGGACATAACTCCCTCCTACC
TGGACACCGACGACATGAAGCATTTCCACGGCACCTTGAAGGAAGTGTGC
GACAAGCACGACGAGGGGTATTACCCCAAATTTAAAAAATGGGCCGACGA
ATATTTTTTGATCAAGCACAGGGGCGAGACGCGCGGCTTGGGTGGTGTTT
TTTTCGACGACCAGAACGATAAGTCTCCTGATGAGCATTTCGCCTTTTCG
GAGGAGATGCTGAATACGGTGACTAAGGCGTATTTGCCCATCATCGAGAA
GCATAAGAACGATGCCTTCACCGAGGAACAGAAGAAGTGGCAGCAGATCC
GGCGTGGCCGTTACACGGAGTTTAATTTGGTGTATGACAGAGGGACGGTG
TTCGGGTTAAAGACGGGAGGGAGGATTGAGAGTATCCTCATGTCGCTGCC
GGAGACGGCTCGATGGGAGTATGACCACCACCCGGCGGAAGGGAGCCCAG
AGGCGGAGATCATGGATGCGTTTAAGAACGCGAGGGAATGGGTTTGAGCG
AGCGGGTGCCTTTCTTTGCCTGCGGTTTGAGCTCCGTCATGCACCCTAGG
TTGGCCATCTGCAAGGCCGTGGAAGAATGCGACGGGGGTGCCAAGTTCCA
TTCCGACGCCTGGATTCGTGCCGATGGCGGGGGAGGGATATCAATGGTCC
TCGGTGATGGGAAGGTCTGGGAGAAGGCAGGTTGTAACCTGTCGGTGGTG
TATGGGAGCATGCCTCAGGAGGCGCTGCAGGCGGCGACGGAGAGGGGGGT
AGATAGGGCGAAGGGGATGAAGCCGGATGCGTGCGAGCCTCGCGACGGCC
ACGACGGCCGCAGCCGTGCTGCTCCTAGCACTTCCGAGCACGTCCAACGC
CCTCGCTTCCTCCGCCCGTCCCCGTGCCATGACAACCGGATACCTTCACC
AACCCATGGCAAGCGTGGGGGGCAGCCGCCGCTTGAATGCCTTGGCAATG
GCCCGTCGCACCGCTCACTTGTACCAACGCAGCGTCGTGGCCATGTCAGC
CGCCGCCCCCACCAAGAAGGAAGAGACGGGCATCGGGTGGAACTCACATA
AGCCCGTGACTGAAGTGCCCGAATCCTTGGTCCGTGGCGTGGAAGGAAAT
GAGAGCATGCGTCGCCGGTTTGAGAAGGCCTGCCGGGAGGCGCAGAACCC
GCACTGTCCGACCATGCACTTCAACTACCGTTACTTCGAGACAGAGGGCG
GGGCTTGGTGGTTCGGCGGGGGCATGGACATAACTCCCTCCTACCTGGAC
ACCGACGACATGAAGCATTTCCACGGCACCTTGAAGGAAGTGTGCGACAA
GCACGACGAGGGGTATTACCCCAAATTTAAAAAATGGGCCGACGAATATT
TTTTGATCAAGCACAGGGGCGAGACGCGCGGCTTGGGTGGTGTTTTTTTC
GACGACCAGAACGATAAGTCTCCTGATGAGCATTTCGCCTTTTCGGAGGA
GATGCTGAATACGGTGACTAAGGCGTATTTGCCCATCATCGAGAAGCATA
AGAACGATGCCTTCACCGAGGAACAGAAGAAGTGGCAGCAGATCCGGCGT
GGCCGTTACACGGAGTTTAATTTGGTGTATGACAGAGGGACGGTGTTCGG
GTTAAAGACGGGAGGGAGGATTGAGAGTATCCTCATGTCGCTGCCGGAGA
CGGCTCGATGGGAGTATGACCACCACCCGGCGGAAGGGAGCCCAGAGGCG
GAGATCATGGATGCGTTTAAGAACGCGAGGGAATGGGTTTGAGCGAGCGG
GTGCCTTTCTTTGCCTGCGGTTTGAGCTCCGTCATGCACCCTAGGTTGGC
CATCTGCAAGGCCGTGGAAGAATGCGACGGGGGTGCCAAGTTCCATTCCG
ACGCCTGGATTCGTGCCGATGGCGGGGGAGGGATATCAATGGTCCTCGGT
GATGGGAAGGTCTGGGAGAAGGCAGGTTGTAACCTGTCGGTGGTGTATGG
GAGCATGCCTCAGGAGGCGCTGCAGGCGGCGACGGAGAGGGGGGTAGATA
GGGCGAAGGGGATGAAGCCGGATGCGTGCGAGCCTCGCGACGGCCACGAC
GGCCGCAGCCGTGCTGCTCCTAGCACTTCCGAGCACGTCCAACGCCCTCG
CTTCCTCCGCCCGTCCCCGTGCCATGACAACCGGATACCTTCACCAACCC
ATGGCAAGCGTGGGGGGCAGCCGCCGCTTGAATGCCTTGGCAATGGCCCG
TCGCACCGCTCACTTGTACCAACGCAGCGTCGTGGCCATGTCAGCCGCCG
CCCCCACCAAGAAGGAAGAGACGGGCATCGGGTGGAACTCACATAAGCCC
GTGACTGAAGTGCCCGAATCCTTGGTCCGTGGCGTGGAAGGAAATGAGAG
CATGCGTCGCCGGTTTGAGAAGGCCTGCCGGGAGGCGCAGAACCCGCACT
GTCCGACCATGCACTTCAACTACCGTTACTTCGAGACAGAGGGCGGGGCT
TGGTGGTTCGGCGGGGGCATGGACATAACTCCCTCCTACCTGGACACCGA
CGACATGAAGCATTTCCACGGCACCTTGAAGGAAGTGTGCGACAAGCACG
ACGAGGGGTATTACCCCAAATTTAAAAAATGGGCCGACGAATATTTTTTG
ATCAAGCACAGGGGCGAGACGCGCGGCTTGGGTGGTGTTTTTTTCGACGA
CCAGAACGATAAGTCTCCTGATGAGCATTTCGCCTTTTCGGAGGAGATGC
TGAATACGGTGACTAAGGCGTATTTGCCCATCATCGAGAAGCATAAGAAC
GATGCCTTCACCGAGGAACAGAAGAAGTGGCAGCAGATCCGGCGTGGCCG
TTACACGGAGTTTAATTTGGTGTATGACAGAGGGACGGTGTTCGGGTTAA
AGACGGGAGGGAGGATTGAGAGTATCCTCATGTCGCTGCCGGAGACGGCT
CGATGGGAGTATGACCACCACCCGGCGGAAGGGAGCCCAGAGGCGGAGAT
CATGGATGCGTTTAAGAACGCGAGGGAATGGGTTTGAGCGAGCGGGTGCC
TTTCTTTGCCTGCGGTTTGAGCTCCGTCATGCACCCTAGGTTGGCCATCT
GCAAGGCCGTGGAAGAATGCGACGGGGGTGCCAAGTTCCATTCCGACGCC
TGGATTCGTGCCGATGGCGGGGGAGGGATATCAATGGTCCTCGGTGATGG
GAAGGTCTGGGAGAAGGCAGGTTGTAACCTGTCGGTGGTGTATGGGAGCA
TGCCTCAGGAGGCGCTGCAGGCGGCGACGGAGAGGGGGGTAGATAGGGCG
AAGGGGATGAAGCCGGATGCGTGCGAGCCTCGCGACGGCCACGACGGCCG
CAGCCGTGCTGCTCCTAGCACTTCCGAGCACGTCCAACGCCCTCGCTTCC
TCCGCCCGTCCCCGTGCCATGACAACCGGATACCTTCACCAACCCATGGC
AAGCGTGGGGGGCAGCCGCCGCTTGAATGCCTTGGCAATGGCCCGTCGCA
CCGCTCACTTGTACCAACGCAGCGTCGTGGCCATGTCAGCCGCCGCCCCC
ACCAAGAAGGAAGAGACGGGCATCGGGTGGAACTCACATAAGCCCGTGAC
TGAAGTGCCCGAATCCTTGGTCCGTGGCGTGGAAGGAAATGAGAGCATGC
GTCGCCGGTTTGAGAAGGCCTGCCGGGAGGCGCAGAACCCGCACTGTCCG
ACCATGCACTTCAACTACCGTTACTTCGAGACAGAGGGCGGGGCTTGGTG
GTTCGGCGGGGGCATGGACATAACTCCCTCCTACCTGGACACCGACGACA
TGAAGCATTTCCACGGCACCTTGAAGGAAGTGTGCGACAAGCACGACGAG
GGGTATTACCCCAAATTTAAAAAATGGGCCGACGAATATTTTTTGATCAA
GCACAGGGGCGAGACGCGCGGCTTGGGTGGTGTTTTTTTCGACGACCAGA
ACGATAAGTCTCCTGATGAGCATTTCGCCTTTTCGGAGGAGATGCTGAAT
ACGGTGACTAAGGCGTATTTGCCCATCATCGAGAAGCATAAGAACGATGC
CTTCACCGAGGAACAGAAGAAGTGGCAGCAGATCCGGCGTGGCCGTTACA
CGGAGTTTAATTTGGTGTATGACAGAGGGACGGTGTTCGGGTTAAAGACG
GGAGGGAGGATTGAGAGTATCCTCATGTCGCTGCCGGAGACGGCTCGATG
GGAGTATGACCACCACCCGGCGGAAGGGAGCCCAGAGGCGGAGATCATGG
ATGCGTTTAAGAACGCGAGGGAATGGGTTTGAGCGAGCGGGTGCCTTTCT
TTGCCTGCGGTTTGAGCTCCGTCATGCACCCTAGGTTGGCCATCTGCAAG
GCCGTGGAAGAATGCGACGGGGGTGCCAAGTTCCATTCCGACGCCTGGAT
TCGTGCCGATGGCGGGGGAGGGATATCAATGGTCCTCGGTGATGGGAAGG
TCTGGGAGAAGGCAGGTTGTAACCTGTCGGTGGTGTATGGGAGCATGCCT
CAGGAGGCGCTGCAGGCGGCGACGGAGAGGGGGGTAGATAGGGCGAAGGG
GATGAAGCCGGATGCGTGCGAGCCTCGCGACGGCCACGACGGCCGCAGCC
GTGCTGCTCCTAGCACTTCCGAGCACGTCCAACGCCCTCGCTTCCTCCGC
CCGTCCCCGTGCCATGACAACCGGATACCTTCACCAACCCATGGCAAGCG
TGGGGGGCAGCCGCCGCTTGAATGCCTTGGCAATGGCCCGTCGCACCGCT
CACTTGTACCAACGCAGCGTCGTGGCCATGTCAGCCGCCGCCCCCACCAA
GAAGGAAGAGACGGGCATCGGGTGGAACTCACATAAGCCCGTGACTGAAG
TGCCCGAATCCTTGGTCCGTGGCGTGGAAGGAAATGAGAGCATGCGTCGC
CGGTTTGAGAAGGCCTGCCGGGAGGCGCAG back to top
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