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Properties
| Property Name | Value |
|---|
| TranscriptId | 575038 |
| Track | FilteredModels2 |
| ProteinId | 574952 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:968461..970663 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_997 ID=mRNA_997|Name=jgi.p|Nanoce1779_2|574952|organism=Nannochloropsis oceanica|type=mRNA|length=1356bp
ACAGACAGGGCAAGGATCTTCTCCTATTTCCCTCTCCTTTCCTCCTTGCG
TGGTTGTCGTTTTCGTCGGGCCTGACGCTAGTGATCATGCTGCCCGCGGT
GCTGCGTCGATTGGGGCGCTCGGCGGCTGCTGGTGGCCTCCTCGAAAAGA
GCACTCGACCAGCTGCAGCCGCCGCCACTGGCTTTCACAGCAGCCCTGCC
GTGCTGACTAACTACCATCCTACGGCGCAGCACAAGGACGAGGCTGGGAA
CAGTGTGAAGGACGCCTGGGATTTTACTGACGAGAATTACAAGCGCGTCA
ACATGATTTTAGCGCGCTACCCGGCCAATTACAAAGCGGCCGGTATCATC
CCCATGCTGGACTTGGCGCAACGGCAAAACGGCGGTTGGCTTCCGGTGGC
GGCCATGGATAAAGTAGCTTCCATTGTCGGCGTGGTGCCGATGCGTGTAT
ATGAGGTGGCGACATTCTACACCATGTTCAACCGTGAGAAGGTTGGTAAA
TGGTTTATTCAGCTGTGTGGTACCACGCCTTGCATGGTGAATGGAGCCGA
GGAGATCCGCGCGACGATTGAGAAACACCTCGGCATCAAGGAGGGGGAGA
CGAGCAAAGATGGCTTGTTCACTTTGAGGGAAGTAGAGTGCCTGGGGTCA
TGCGCTAATGCGCCCATGATTCAGTTGAATGATGACTACTATGAATGCCT
CACCCCCGCCACGACCATCGAGCTACTCGAGGCGTGCAAGAAGGGGAACC
CACCCAAGATGGGTCGCTGGGGCTCGTTGCCGATGAATGGGCAAGTCTCC
TGTGAGGGGCCACATGGCAAGACAAGTCTGAAGGAACCTGCACCCACGCC
GGGTTTTATGATGCGCACGGACCTGGATGGGAAGGTCGACCCGGCGACGG
TGAAGAAGGAGATGCATTATTAGATTGAGAGGGGGAGTGAAAATGAACAG
GGTTCATTCTCCGCGTACATGAAAATTTATGCTACATTTTGGTGTGGTGG
GCTGTGTGTTCATGGGCGTGATGGATGGTAGTTTGGACGTTGTCCTTGTA
CGAGAAGTGAGGGACATGCGCGTATGTCGGCCCAAGCTATGGCGAGCGGG
GGGGGAAGGGATGGGGAGGGAGAGATAGGACTGAGATAAAAGATGGTTAA
CAGAGTGAAGTAGAAATATTACAAAGATGATGAGACTTCAGTGTCGTATT
GGTTCTTGATGACTGGCAATTTTACTGTCTTCTCTGTGCGAGCGAAAATC
TTTGAGGCGATGTGAAGTGTGGCAATCCCGACTTGCTCTATCTCAAAAAG
GAGGCGGCAGAAAGTACATTTCAATTAATTTGTGAAGCCAGCGGCGTCAA
GCTTAT back to topprotein sequence of jgi.p|Nanoce1779_2|574952 >mRNA_997-protein ID=mRNA_997-protein|Name=jgi.p|Nanoce1779_2|574952|organism=Nannochloropsis oceanica|type=polypeptide|length=279bp
MLPAVLRRLGRSAAAGGLLEKSTRPAAAAATGFHSSPAVLTNYHPTAQHK
DEAGNSVKDAWDFTDENYKRVNMILARYPANYKAAGIIPMLDLAQRQNGG
WLPVAAMDKVASIVGVVPMRVYEVATFYTMFNREKVGKWFIQLCGTTPCM
VNGAEEIRATIEKHLGIKEGETSKDGLFTLREVECLGSCANAPMIQLNDD
YYECLTPATTIELLEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTSLKE
PAPTPGFMMRTDLDGKVDPATVKKEMHY* back to topmRNA from alignment at scaffold_2:968461..970663- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_997 ID=mRNA_997|Name=jgi.p|Nanoce1779_2|574952|organism=Nannochloropsis oceanica|type=mRNA|length=2203bp|location=Sequence derived from alignment at scaffold_2:968461..970663- (Nannochloropsis oceanica)
ACAGACAGGGCAAGGATCTTCTCCTATTTCCCTCTCCTTTCCTCCTTGCG
TGGTTGTCGTTTTCGTCGGGCCTGACGCTAGTGATCATGCTGCCCGCGGT
GCTGCGTCGATTGGGGCGCTCGGCGGCTGCTGGTGGCCTCCTCGAAAAGG
TACGTCCCCTTCTTTTAACTCACGCGTCATCTAGTGCAACGCTTCTGCAG
GGTGACGGAATGATTCTCGTATCAGTTTACTCTGCTCTCGCCCTTCTGTG
GCTTGTCGTCGTCCGCGGTCTGACCTACACACATCCGGCCCTTTCTCTAA
GAGCACTCGACCAGCTGCAGCCGCCGCCACTGGCTTTCACAGCAGCCCTG
CCGTGCTGACTAACTACCATCCTACGGCGCAGCACAAGGACGAGGCTGGG
AACAGTGTGAAGGACGCCTGGGATTTTACTGACGGTAAGCAACTCTTTTC
ATTGCGCTGACGGTGTTATAGTGTAGTGGGAATCATCGCCTCCTCACTCC
CTCCTCCCCCCCTCCCGATTTCCCTACTTTACAGAGAATTACAAGCGCGT
CAACATGATTTTAGCGCGCTACCCGGCCAATTACAAAGCGGCCGGTATCA
TCCCCATGCTGGACTTGGCGCAACGGCAAAACGGCGGTTGGCTTCCGGTG
GCGGCCATGGATAAAGTAGCTTCCATTGTCGGCGTGGTGCCGATGCGTGT
ATATGAGGTGGCGACATTCTACACCATGTTCAACCGGTATGTGCTATTTT
AAATTTGTAATCAAGACAATTAATATGCATGCTGTGCGCACGTGCATGTA
TGCTTGTATGTGCTTTTTTGATTATCTCTCTGGGCTCTGGTGGTGTGAAT
ATGGCTATTGTGGTAACTGAAGCGGGAAGGGGGGTGGGGATGCATGTGTG
TACGAGGTTGCGGTGCTTCGTGCCATGTGCAACCGGTAGGTAAGACACGG
AGCGGTGGTGTCGAAGAGGATATGTCAGAGGTGTGCATATTTGTACGCAT
GCATCCACACATTCGGTGAGAACATATCGGCATCGCTCACTTATCATCCC
TCCTTTCCTCCCTCCCTCCCTCCCTCCAATCTCCCCCCAGTGAGAAGGTT
GGTAAATGGTTTATTCAGCTGTGTGGTACCACGCCTTGCATGGTGAATGG
AGCCGAGGAGATCCGCGCGACGATTGAGAAACACCTCGGCATCAAGGAGG
GGGAGACGAGCAAAGATGGCTTGTTCACTTTGAGGGAAGTAGAGTGCCTG
GGGTCATGCGCTAATGCGCCCATGATTCAGTTGAATGATGACTACTATGT
GAGTAATATTTTTCTACCTCTTCGTCCTATTTCTTTCCCTCCCGCTCCCT
CCCTCCCTTCCTGAGCGTTCAAGGACATCTAGACTCGTCATTCCACTTTA
GGGCGGGGGGAGGGGAAGGAAGTGAGGGAGCCAGATTTCTCGCTTTTCCC
CTATGACAAAAGCCTTTTTAAACAAGAAACTATTGCGTTTATCCGCTCAT
TACTCACTTACTCACCCCCACTCACTCACACCTATTTAGGAATGCCTCAC
CCCCGCCACGACCATCGAGCTACTCGAGGCGTGCAAGAAGGGGAACCCAC
CCAAGATGGGTCGCTGGGGCTCGTTGCCGATGAATGGGCAAGTCTCCTGT
GAGGGGCCACATGGCAAGACAAGTCTGAAGGAACCTGCACCCACGCCGGG
TTTTATGATGCGCACGGACCTGGATGGGAAGGTCGACCCGGCGACGGTGA
AGAAGGAGATGCATTATTAGATTGAGAGGGGGAGTGAAAATGAACAGGGT
TCATTCTCCGCGTACATGAAAATTTATGCTACATTTTGGTGTGGTGGGCT
GTGTGTTCATGGGCGTGATGGATGGTAGTTTGGACGTTGTCCTTGTACGA
GAAGTGAGGGACATGCGCGTATGTCGGCCCAAGCTATGGCGAGCGGGGGG
GGAAGGGATGGGGAGGGAGAGATAGGACTGAGATAAAAGATGGTTAACAG
AGTGAAGTAGAAATATTACAAAGATGATGAGACTTCAGTGTCGTATTGGT
TCTTGATGACTGGCAATTTTACTGTCTTCTCTGTGCGAGCGAAAATCTTT
GAGGCGATGTGAAGTGTGGCAATCCCGACTTGCTCTATCTCAAAAAGGAG
GCGGCAGAAAGTACATTTCAATTAATTTGTGAAGCCAGCGGCGTCAAGCT
TAT back to topCoding sequence (CDS) from alignment at scaffold_2:968461..970663- >mRNA_997 ID=mRNA_997|Name=jgi.p|Nanoce1779_2|574952|organism=Nannochloropsis oceanica|type=CDS|length=4185bp|location=Sequence derived from alignment at scaffold_2:968461..970663- (Nannochloropsis oceanica)
GAATGCCTCACCCCCGCCACGACCATCGAGCTACTCGAGGCGTGCAAGAA
GGGGAACCCACCCAAGATGGGTCGCTGGGGCTCGTTGCCGATGAATGGGC
AAGTCTCCTGTGAGGGGCCACATGGCAAGACAAGTCTGAAGGAACCTGCA
CCCACGCCGGGTTTTATGATGCGCACGGACCTGGATGGGAAGGTCGACCC
GGCGACGGTGAAGAAGGAGATGCATTATTAGTGAGAAGGTTGGTAAATGG
TTTATTCAGCTGTGTGGTACCACGCCTTGCATGGTGAATGGAGCCGAGGA
GATCCGCGCGACGATTGAGAAACACCTCGGCATCAAGGAGGGGGAGACGA
GCAAAGATGGCTTGTTCACTTTGAGGGAAGTAGAGTGCCTGGGGTCATGC
GCTAATGCGCCCATGATTCAGTTGAATGATGACTACTATAGAATTACAAG
CGCGTCAACATGATTTTAGCGCGCTACCCGGCCAATTACAAAGCGGCCGG
TATCATCCCCATGCTGGACTTGGCGCAACGGCAAAACGGCGGTTGGCTTC
CGGTGGCGGCCATGGATAAAGTAGCTTCCATTGTCGGCGTGGTGCCGATG
CGTGTATATGAGGTGGCGACATTCTACACCATGTTCAACCGAGCACTCGA
CCAGCTGCAGCCGCCGCCACTGGCTTTCACAGCAGCCCTGCCGTGCTGAC
TAACTACCATCCTACGGCGCAGCACAAGGACGAGGCTGGGAACAGTGTGA
AGGACGCCTGGGATTTTACTGACGATGCTGCCCGCGGTGCTGCGTCGATT
GGGGCGCTCGGCGGCTGCTGGTGGCCTCCTCGAAAAGGAATGCCTCACCC
CCGCCACGACCATCGAGCTACTCGAGGCGTGCAAGAAGGGGAACCCACCC
AAGATGGGTCGCTGGGGCTCGTTGCCGATGAATGGGCAAGTCTCCTGTGA
GGGGCCACATGGCAAGACAAGTCTGAAGGAACCTGCACCCACGCCGGGTT
TTATGATGCGCACGGACCTGGATGGGAAGGTCGACCCGGCGACGGTGAAG
AAGGAGATGCATTATTAGTGAGAAGGTTGGTAAATGGTTTATTCAGCTGT
GTGGTACCACGCCTTGCATGGTGAATGGAGCCGAGGAGATCCGCGCGACG
ATTGAGAAACACCTCGGCATCAAGGAGGGGGAGACGAGCAAAGATGGCTT
GTTCACTTTGAGGGAAGTAGAGTGCCTGGGGTCATGCGCTAATGCGCCCA
TGATTCAGTTGAATGATGACTACTATAGAATTACAAGCGCGTCAACATGA
TTTTAGCGCGCTACCCGGCCAATTACAAAGCGGCCGGTATCATCCCCATG
CTGGACTTGGCGCAACGGCAAAACGGCGGTTGGCTTCCGGTGGCGGCCAT
GGATAAAGTAGCTTCCATTGTCGGCGTGGTGCCGATGCGTGTATATGAGG
TGGCGACATTCTACACCATGTTCAACCGAGCACTCGACCAGCTGCAGCCG
CCGCCACTGGCTTTCACAGCAGCCCTGCCGTGCTGACTAACTACCATCCT
ACGGCGCAGCACAAGGACGAGGCTGGGAACAGTGTGAAGGACGCCTGGGA
TTTTACTGACGATGCTGCCCGCGGTGCTGCGTCGATTGGGGCGCTCGGCG
GCTGCTGGTGGCCTCCTCGAAAAGGAATGCCTCACCCCCGCCACGACCAT
CGAGCTACTCGAGGCGTGCAAGAAGGGGAACCCACCCAAGATGGGTCGCT
GGGGCTCGTTGCCGATGAATGGGCAAGTCTCCTGTGAGGGGCCACATGGC
AAGACAAGTCTGAAGGAACCTGCACCCACGCCGGGTTTTATGATGCGCAC
GGACCTGGATGGGAAGGTCGACCCGGCGACGGTGAAGAAGGAGATGCATT
ATTAGTGAGAAGGTTGGTAAATGGTTTATTCAGCTGTGTGGTACCACGCC
TTGCATGGTGAATGGAGCCGAGGAGATCCGCGCGACGATTGAGAAACACC
TCGGCATCAAGGAGGGGGAGACGAGCAAAGATGGCTTGTTCACTTTGAGG
GAAGTAGAGTGCCTGGGGTCATGCGCTAATGCGCCCATGATTCAGTTGAA
TGATGACTACTATAGAATTACAAGCGCGTCAACATGATTTTAGCGCGCTA
CCCGGCCAATTACAAAGCGGCCGGTATCATCCCCATGCTGGACTTGGCGC
AACGGCAAAACGGCGGTTGGCTTCCGGTGGCGGCCATGGATAAAGTAGCT
TCCATTGTCGGCGTGGTGCCGATGCGTGTATATGAGGTGGCGACATTCTA
CACCATGTTCAACCGAGCACTCGACCAGCTGCAGCCGCCGCCACTGGCTT
TCACAGCAGCCCTGCCGTGCTGACTAACTACCATCCTACGGCGCAGCACA
AGGACGAGGCTGGGAACAGTGTGAAGGACGCCTGGGATTTTACTGACGAT
GCTGCCCGCGGTGCTGCGTCGATTGGGGCGCTCGGCGGCTGCTGGTGGCC
TCCTCGAAAAGGAATGCCTCACCCCCGCCACGACCATCGAGCTACTCGAG
GCGTGCAAGAAGGGGAACCCACCCAAGATGGGTCGCTGGGGCTCGTTGCC
GATGAATGGGCAAGTCTCCTGTGAGGGGCCACATGGCAAGACAAGTCTGA
AGGAACCTGCACCCACGCCGGGTTTTATGATGCGCACGGACCTGGATGGG
AAGGTCGACCCGGCGACGGTGAAGAAGGAGATGCATTATTAGTGAGAAGG
TTGGTAAATGGTTTATTCAGCTGTGTGGTACCACGCCTTGCATGGTGAAT
GGAGCCGAGGAGATCCGCGCGACGATTGAGAAACACCTCGGCATCAAGGA
GGGGGAGACGAGCAAAGATGGCTTGTTCACTTTGAGGGAAGTAGAGTGCC
TGGGGTCATGCGCTAATGCGCCCATGATTCAGTTGAATGATGACTACTAT
AGAATTACAAGCGCGTCAACATGATTTTAGCGCGCTACCCGGCCAATTAC
AAAGCGGCCGGTATCATCCCCATGCTGGACTTGGCGCAACGGCAAAACGG
CGGTTGGCTTCCGGTGGCGGCCATGGATAAAGTAGCTTCCATTGTCGGCG
TGGTGCCGATGCGTGTATATGAGGTGGCGACATTCTACACCATGTTCAAC
CGAGCACTCGACCAGCTGCAGCCGCCGCCACTGGCTTTCACAGCAGCCCT
GCCGTGCTGACTAACTACCATCCTACGGCGCAGCACAAGGACGAGGCTGG
GAACAGTGTGAAGGACGCCTGGGATTTTACTGACGATGCTGCCCGCGGTG
CTGCGTCGATTGGGGCGCTCGGCGGCTGCTGGTGGCCTCCTCGAAAAGGA
ATGCCTCACCCCCGCCACGACCATCGAGCTACTCGAGGCGTGCAAGAAGG
GGAACCCACCCAAGATGGGTCGCTGGGGCTCGTTGCCGATGAATGGGCAA
GTCTCCTGTGAGGGGCCACATGGCAAGACAAGTCTGAAGGAACCTGCACC
CACGCCGGGTTTTATGATGCGCACGGACCTGGATGGGAAGGTCGACCCGG
CGACGGTGAAGAAGGAGATGCATTATTAGTGAGAAGGTTGGTAAATGGTT
TATTCAGCTGTGTGGTACCACGCCTTGCATGGTGAATGGAGCCGAGGAGA
TCCGCGCGACGATTGAGAAACACCTCGGCATCAAGGAGGGGGAGACGAGC
AAAGATGGCTTGTTCACTTTGAGGGAAGTAGAGTGCCTGGGGTCATGCGC
TAATGCGCCCATGATTCAGTTGAATGATGACTACTATAGAATTACAAGCG
CGTCAACATGATTTTAGCGCGCTACCCGGCCAATTACAAAGCGGCCGGTA
TCATCCCCATGCTGGACTTGGCGCAACGGCAAAACGGCGGTTGGCTTCCG
GTGGCGGCCATGGATAAAGTAGCTTCCATTGTCGGCGTGGTGCCGATGCG
TGTATATGAGGTGGCGACATTCTACACCATGTTCAACCGAGCACTCGACC
AGCTGCAGCCGCCGCCACTGGCTTTCACAGCAGCCCTGCCGTGCTGACTA
ACTACCATCCTACGGCGCAGCACAAGGACGAGGCTGGGAACAGTGTGAAG
GACGCCTGGGATTTTACTGACGATGCTGCCCGCGGTGCTGCGTCGATTGG
GGCGCTCGGCGGCTGCTGGTGGCCTCCTCGAAAAG back to top
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