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Properties
| Property Name | Value |
|---|
| TranscriptId | 624741 |
| Track | FilteredModels2 |
| ProteinId | 624655 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:965772..967983 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_996 ID=mRNA_996|Name=jgi.p|Nanoce1779_2|624655|organism=Nannochloropsis oceanica|type=mRNA|length=1778bp
ACAGGGAGGGCGAGGCGGCGACGGGATGGCCTCCTTCTGAATCCCGAACC
GACTTCGCATCAGGCTGCCCCCTTCTCCGCTACACACGTGCACCTCAACG
CAAGACGACAGCGACGCCACTGTCTGCTGACCGCGGGTTGACAAGAAGAG
GGGGATAGGAAGATATAATCGGCGGAAGAGGGACCGCGGACAGAGACGCT
ATCTGTAGAGAACAAGAGGGAGCAAGCATTGGCGCGGAGCGAGGAAAAGA
ACTTGTCAAATTAGTTTGATATCGCACCAGCTACAACGCGCCACAACGCC
CACCGAAAACACACAATAATTAGAACGATGACCACATCTTTGTCCACGCA
GCCACCTTTGCCGGTTGGCTCGCAGGGGCAGGCCATCTCGGTCATCAGCA
ACAAGTACCGCCTCTCGCGACGATTGGGGGGAGGGTCCTTCGGTGACATC
TACCTAGGTGAATATATCCCTACCAGCGAGAAGGTTGCGATTAAGTTCGA
GAAGCATGGTGCACGCTGCCCTCAGTTGAGACACGAATATAAGGTATACA
GGGAGCTGCAACCCTGCCCGGGGTTCGGGAAAGTTCATTACTTCGGACAG
ATTGATTGCTTCAATGTGATGGTCATGGAGTTGCTAGGGTATTCTCTCGA
AGACTTGTTTAACAAATGCGGTCGACGCTTTTCACTGCGCACGGTTTTGC
AGCTGGCGGACCAGGTGCTGGAGCGCGTGGAAGTAATGCATAACAGGCAC
TTGATCCACCGGGATATTAAGCCCGCCAATTTCGTCGTGGGCCATGGCCC
AACTGCAGCCATCGTTCACTGCATCGACTTCGGGCTGAGCAAGCGGTATC
GCCACCCCCGCACCCTACAACATATCGCCTACCGGGACGGGCGTTCCTTA
ACCGGTACCCCGCGTTATGCCTCCATCAACAACCACCTAGGCATCGAGCA
ATCACGAAGGGATGATCTTGAATCAATCGGCTACGTCCTCGTCTACTTCC
TTCGGGGCATCCTTCCCTGGCAAGGCCTCAAGGCCAAAACCGCCAGCAAG
AAATACAAAATGATTATGGAAAAAAAACAGACCGTATCAGTTTCCGAGCT
CTGCCAAGGCTGCCCCGCGGAATTCGCGCACTACCTGACATACTGCCGCT
CCCTCTCCTTCGACGGGAAGCCTGATATGGGATACCTCCGCGGTCTCTTT
CGAGACCTTTATGTTCAACAAGGCTTTGGATCTTATTCAAGCACCCCCTC
CACTGAATCCACCATCCCGTCCCACATGTATACGAGGCATGCAGGCGTTG
TCACCGGGTCCGCGGCGTTGTTGGCAGCATCAGCTGGTCCGATTCAATGG
GATTGGGATCGCTTCGTGAATCCTGCCTACTATGCCGCTACTCCTGCTCC
TGCTACCACAGGGGTGGGGGGGGGCAGAGGAGGGGACAAGGGGCGGGGGG
TGGCAGGTGCCGGGGTGGCGAGTGGAGGGAAGGTTCCGGCGGCAGGAGGA
GGAAGAGGAGGAGGGCGGATAGGGGCAGGAGGGGGGGATGTGATGGATGT
TACGAGTAGCGATGATCACTTGAAGGCGACTGCAGCGGGGGCTGGAGCCG
CAGCAGCAGCAGCGGCAGCAGCAGAACAAACCGAGTCACAAACGACATCT
TTCTCTCTCGCAAGGCGTGGAGGGAGGAGTGGAGGGAGAGGTGGCTGGTA
CTACGAGTGATAAGGGTATTACTTGTATAGATTCGACCGGGGCAGCCTTT
GTGCAAGGTGCGGCAGGAGGAGGTGGGG back to topprotein sequence of jgi.p|Nanoce1779_2|624655 >mRNA_996-protein ID=mRNA_996-protein|Name=jgi.p|Nanoce1779_2|624655|organism=Nannochloropsis oceanica|type=polypeptide|length=461bp
MTTSLSTQPPLPVGSQGQAISVISNKYRLSRRLGGGSFGDIYLGEYIPTS
EKVAIKFEKHGARCPQLRHEYKVYRELQPCPGFGKVHYFGQIDCFNVMVM
ELLGYSLEDLFNKCGRRFSLRTVLQLADQVLERVEVMHNRHLIHRDIKPA
NFVVGHGPTAAIVHCIDFGLSKRYRHPRTLQHIAYRDGRSLTGTPRYASI
NNHLGIEQSRRDDLESIGYVLVYFLRGILPWQGLKAKTASKKYKMIMEKK
QTVSVSELCQGCPAEFAHYLTYCRSLSFDGKPDMGYLRGLFRDLYVQQGF
GSYSSTPSTESTIPSHMYTRHAGVVTGSAALLAASAGPIQWDWDRFVNPA
YYAATPAPATTGVGGGRGGDKGRGVAGAGVASGGKVPAAGGGRGGGRIGA
GGGDVMDVTSSDDHLKATAAGAGAAAAAAAAAEQTESQTTSFSLARRGGR
SGGRGGWYYE* back to topmRNA from alignment at scaffold_2:965772..967983- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_996 ID=mRNA_996|Name=jgi.p|Nanoce1779_2|624655|organism=Nannochloropsis oceanica|type=mRNA|length=2212bp|location=Sequence derived from alignment at scaffold_2:965772..967983- (Nannochloropsis oceanica)
ACAGGGAGGGCGAGGCGGCGACGGGATGGCCTCCTTCTGAATCCCGAACC
GACTTCGCATCAGGCTGCCCCCTTCTCCGCTACACACGTGCACCTCAACG
CAAGACGACAGCGACGCCACTGTCTGCTGACCGCGGGTTGACAAGAAGAG
GGGGATAGGAAGATATAATCGGCGGAAGAGGGACCGCGGACAGAGACGCT
ATCTGTAGAGAACAAGAGGGAGCAAGCATTGGCGCGGAGCGAGGAAAAGA
ACTTGTCAAATTAGTTTGATATCGCACCAGCTACAACGCGCCACAACGCC
CACCGAAAACACACAATAATTAGAACGATGACCACATCTTTGTCCACGCA
GCCACCTTTGCCGGTTGGCTCGCAGGGGCAGGCCATCTCGGTCATCAGCA
ACAAGTACCGCCTCTCGCGACGATTGGGGGGAGGGTCCTTCGGTGACATC
TACCTAGGTGAATATATCCCTACCAGCGAGAAGGTTGCGATTAAGTTCGA
GAAGCATGGTGCACGCTGCCCTCAGTTGAGACACGAATATAAGGTATACA
GGGAGCTGCAACCCTGCCCGGGGTTCGGGAAAGTTCATTACTTCGGACAG
ATTGATTGCTTCAATGTGATGGTCATGGAGTTGCTAGGGTATTCTCTCGA
AGACTTGTTTAACAAATGCGGTCGACGCTTTTCACTGCGCACGGTTTTGC
AGCTGGCGGACCAGGTGCTGGAGCGCGTGGAAGTAATGCATAACAGGCAC
TTGATCCACCGGGATATTAAGGTACGTACGTAGATTTGCATGCGTGTGGA
GGAGCAACTTTAGGGGGCCTGAGAGGGGTGTGTGTATTACGTGTAGGAGG
GCATTGATTGCCGGGGTAGTGTTGTTGTGACTTATATTGTTTGTCATCGG
CTCCTTCCGACTTCTTTCCGCTTTTCCCCTTCCCGCTCTTTCTTCCTCCC
TGACATAACACACTCACCCTCCCTCTCCTCCCTCCCTCCACCCTCTTCGT
CTCAGCCCGCCAATTTCGTCGTGGGCCATGGCCCAACTGCAGCCATCGTT
CACTGCATCGACTTCGGGCTGAGCAAGCGGTATCGCCACCCCCGCACCCT
ACAACATATCGCCTACCGGGACGGGCGTTCCTTAACCGGTACCCCGCGTT
ATGCCTCCATCAACAACCACCTAGGCATCGAGCAATCACGAAGGGATGAT
CTTGAATCAATCGGCTACGTCCTCGTCTACTTCCTTCGGGGCATCCTTCC
CTGGCAAGGCCTCAAGGCCAAAACCGCCAGCAAGAAATACAAAATGATTA
TGGAAAAAAAACAGACCGTATCAGTTTCCGAGCTCTGCCAAGGCTGCCCC
GCGGAATTCGCGCACTACCTGACATACTGCCGCTCCCTCTCCTTCGACGG
GAAGCCTGATATGGGATACCTCCGCGGTCTCTTTCGAGACCTTTATGTTC
AACAAGGCTTTGGATCTTATTCAAGCACCCCCTCCACTGAATCCACCATC
CCGTCCCACATGTATACGAGGCATGCAGGCGTTGTCACCGGGTCCGCGGC
GTTGTTGGCAGCATCAGCTGGTCCGATTCAATGGGATTGGGATCGCTTCG
TGAATCCTGCCTACTATGCCGCTACTCCTGCTCCTGCTACCACAGGGGTG
GGGGGGGGCAGAGGAGGGGACAAGGGGCGGGGGGTGGCAGGTGCCGGGGT
GGCGAGTGGAGGGAAGGTTCCGGCGGCAGGAGGAGGAAGAGGAGGAGGGC
GGATAGGGGCAGGAGGGGGGGATGTGATGGATGTTACGAGTAGCGATGAT
CACTTGAAGGCGACTGCAGCGGGGGCTGGAGCCGGTGGGGGGGAGGGAGG
GAGGGAGGGAGGGGTGGTTATGATGCAGACTTCGGAGATGGAGGCGAGAA
AGGTGATAAAGCTACAGCAGCAACCGCAGCAGCAACAGCAGCAACAGCAG
CAACAGCAGCATTCGCCTCTGAATCAACTGAAGCAGAGCCTGCGAATTTC
GGATGATGGGGACATCAACCACCACCACCACCAGCAGCAGCAGCAGCGGC
AGCAGCAGAACAAACCGAGTCACAAACGACATCTTTCTCTCTCGCAAGGC
GTGGAGGGAGGAGTGGAGGGAGAGGTGGCTGGTACTACGAGTGATAAGGG
TATTACTTGTATAGATTCGACCGGGGCAGCCTTTGTGCAAGGTGCGGCAG
GAGGAGGTGGGG back to topCoding sequence (CDS) from alignment at scaffold_2:965772..967983- >mRNA_996 ID=mRNA_996|Name=jgi.p|Nanoce1779_2|624655|organism=Nannochloropsis oceanica|type=CDS|length=4149bp|location=Sequence derived from alignment at scaffold_2:965772..967983- (Nannochloropsis oceanica)
CAGCAGCAGCAGCGGCAGCAGCAGAACAAACCGAGTCACAAACGACATCT
TTCTCTCTCGCAAGGCGTGGAGGGAGGAGTGGAGGGAGAGGTGGCTGGTA
CTACGAGTGACCCGCCAATTTCGTCGTGGGCCATGGCCCAACTGCAGCCA
TCGTTCACTGCATCGACTTCGGGCTGAGCAAGCGGTATCGCCACCCCCGC
ACCCTACAACATATCGCCTACCGGGACGGGCGTTCCTTAACCGGTACCCC
GCGTTATGCCTCCATCAACAACCACCTAGGCATCGAGCAATCACGAAGGG
ATGATCTTGAATCAATCGGCTACGTCCTCGTCTACTTCCTTCGGGGCATC
CTTCCCTGGCAAGGCCTCAAGGCCAAAACCGCCAGCAAGAAATACAAAAT
GATTATGGAAAAAAAACAGACCGTATCAGTTTCCGAGCTCTGCCAAGGCT
GCCCCGCGGAATTCGCGCACTACCTGACATACTGCCGCTCCCTCTCCTTC
GACGGGAAGCCTGATATGGGATACCTCCGCGGTCTCTTTCGAGACCTTTA
TGTTCAACAAGGCTTTGGATCTTATTCAAGCACCCCCTCCACTGAATCCA
CCATCCCGTCCCACATGTATACGAGGCATGCAGGCGTTGTCACCGGGTCC
GCGGCGTTGTTGGCAGCATCAGCTGGTCCGATTCAATGGGATTGGGATCG
CTTCGTGAATCCTGCCTACTATGCCGCTACTCCTGCTCCTGCTACCACAG
GGGTGGGGGGGGGCAGAGGAGGGGACAAGGGGCGGGGGGTGGCAGGTGCC
GGGGTGGCGAGTGGAGGGAAGGTTCCGGCGGCAGGAGGAGGAAGAGGAGG
AGGGCGGATAGGGGCAGGAGGGGGGGATGTGATGGATGTTACGAGTAGCG
ATGATCACTTGAAGGCGACTGCAGCGGGGGCTGGAGCCGATGACCACATC
TTTGTCCACGCAGCCACCTTTGCCGGTTGGCTCGCAGGGGCAGGCCATCT
CGGTCATCAGCAACAAGTACCGCCTCTCGCGACGATTGGGGGGAGGGTCC
TTCGGTGACATCTACCTAGGTGAATATATCCCTACCAGCGAGAAGGTTGC
GATTAAGTTCGAGAAGCATGGTGCACGCTGCCCTCAGTTGAGACACGAAT
ATAAGGTATACAGGGAGCTGCAACCCTGCCCGGGGTTCGGGAAAGTTCAT
TACTTCGGACAGATTGATTGCTTCAATGTGATGGTCATGGAGTTGCTAGG
GTATTCTCTCGAAGACTTGTTTAACAAATGCGGTCGACGCTTTTCACTGC
GCACGGTTTTGCAGCTGGCGGACCAGGTGCTGGAGCGCGTGGAAGTAATG
CATAACAGGCACTTGATCCACCGGGATATTAAGCAGCAGCAGCAGCGGCA
GCAGCAGAACAAACCGAGTCACAAACGACATCTTTCTCTCTCGCAAGGCG
TGGAGGGAGGAGTGGAGGGAGAGGTGGCTGGTACTACGAGTGACCCGCCA
ATTTCGTCGTGGGCCATGGCCCAACTGCAGCCATCGTTCACTGCATCGAC
TTCGGGCTGAGCAAGCGGTATCGCCACCCCCGCACCCTACAACATATCGC
CTACCGGGACGGGCGTTCCTTAACCGGTACCCCGCGTTATGCCTCCATCA
ACAACCACCTAGGCATCGAGCAATCACGAAGGGATGATCTTGAATCAATC
GGCTACGTCCTCGTCTACTTCCTTCGGGGCATCCTTCCCTGGCAAGGCCT
CAAGGCCAAAACCGCCAGCAAGAAATACAAAATGATTATGGAAAAAAAAC
AGACCGTATCAGTTTCCGAGCTCTGCCAAGGCTGCCCCGCGGAATTCGCG
CACTACCTGACATACTGCCGCTCCCTCTCCTTCGACGGGAAGCCTGATAT
GGGATACCTCCGCGGTCTCTTTCGAGACCTTTATGTTCAACAAGGCTTTG
GATCTTATTCAAGCACCCCCTCCACTGAATCCACCATCCCGTCCCACATG
TATACGAGGCATGCAGGCGTTGTCACCGGGTCCGCGGCGTTGTTGGCAGC
ATCAGCTGGTCCGATTCAATGGGATTGGGATCGCTTCGTGAATCCTGCCT
ACTATGCCGCTACTCCTGCTCCTGCTACCACAGGGGTGGGGGGGGGCAGA
GGAGGGGACAAGGGGCGGGGGGTGGCAGGTGCCGGGGTGGCGAGTGGAGG
GAAGGTTCCGGCGGCAGGAGGAGGAAGAGGAGGAGGGCGGATAGGGGCAG
GAGGGGGGGATGTGATGGATGTTACGAGTAGCGATGATCACTTGAAGGCG
ACTGCAGCGGGGGCTGGAGCCGATGACCACATCTTTGTCCACGCAGCCAC
CTTTGCCGGTTGGCTCGCAGGGGCAGGCCATCTCGGTCATCAGCAACAAG
TACCGCCTCTCGCGACGATTGGGGGGAGGGTCCTTCGGTGACATCTACCT
AGGTGAATATATCCCTACCAGCGAGAAGGTTGCGATTAAGTTCGAGAAGC
ATGGTGCACGCTGCCCTCAGTTGAGACACGAATATAAGGTATACAGGGAG
CTGCAACCCTGCCCGGGGTTCGGGAAAGTTCATTACTTCGGACAGATTGA
TTGCTTCAATGTGATGGTCATGGAGTTGCTAGGGTATTCTCTCGAAGACT
TGTTTAACAAATGCGGTCGACGCTTTTCACTGCGCACGGTTTTGCAGCTG
GCGGACCAGGTGCTGGAGCGCGTGGAAGTAATGCATAACAGGCACTTGAT
CCACCGGGATATTAAGCAGCAGCAGCAGCGGCAGCAGCAGAACAAACCGA
GTCACAAACGACATCTTTCTCTCTCGCAAGGCGTGGAGGGAGGAGTGGAG
GGAGAGGTGGCTGGTACTACGAGTGACCCGCCAATTTCGTCGTGGGCCAT
GGCCCAACTGCAGCCATCGTTCACTGCATCGACTTCGGGCTGAGCAAGCG
GTATCGCCACCCCCGCACCCTACAACATATCGCCTACCGGGACGGGCGTT
CCTTAACCGGTACCCCGCGTTATGCCTCCATCAACAACCACCTAGGCATC
GAGCAATCACGAAGGGATGATCTTGAATCAATCGGCTACGTCCTCGTCTA
CTTCCTTCGGGGCATCCTTCCCTGGCAAGGCCTCAAGGCCAAAACCGCCA
GCAAGAAATACAAAATGATTATGGAAAAAAAACAGACCGTATCAGTTTCC
GAGCTCTGCCAAGGCTGCCCCGCGGAATTCGCGCACTACCTGACATACTG
CCGCTCCCTCTCCTTCGACGGGAAGCCTGATATGGGATACCTCCGCGGTC
TCTTTCGAGACCTTTATGTTCAACAAGGCTTTGGATCTTATTCAAGCACC
CCCTCCACTGAATCCACCATCCCGTCCCACATGTATACGAGGCATGCAGG
CGTTGTCACCGGGTCCGCGGCGTTGTTGGCAGCATCAGCTGGTCCGATTC
AATGGGATTGGGATCGCTTCGTGAATCCTGCCTACTATGCCGCTACTCCT
GCTCCTGCTACCACAGGGGTGGGGGGGGGCAGAGGAGGGGACAAGGGGCG
GGGGGTGGCAGGTGCCGGGGTGGCGAGTGGAGGGAAGGTTCCGGCGGCAG
GAGGAGGAAGAGGAGGAGGGCGGATAGGGGCAGGAGGGGGGGATGTGATG
GATGTTACGAGTAGCGATGATCACTTGAAGGCGACTGCAGCGGGGGCTGG
AGCCGATGACCACATCTTTGTCCACGCAGCCACCTTTGCCGGTTGGCTCG
CAGGGGCAGGCCATCTCGGTCATCAGCAACAAGTACCGCCTCTCGCGACG
ATTGGGGGGAGGGTCCTTCGGTGACATCTACCTAGGTGAATATATCCCTA
CCAGCGAGAAGGTTGCGATTAAGTTCGAGAAGCATGGTGCACGCTGCCCT
CAGTTGAGACACGAATATAAGGTATACAGGGAGCTGCAACCCTGCCCGGG
GTTCGGGAAAGTTCATTACTTCGGACAGATTGATTGCTTCAATGTGATGG
TCATGGAGTTGCTAGGGTATTCTCTCGAAGACTTGTTTAACAAATGCGGT
CGACGCTTTTCACTGCGCACGGTTTTGCAGCTGGCGGACCAGGTGCTGGA
GCGCGTGGAAGTAATGCATAACAGGCACTTGATCCACCGGGATATTAAG back to top
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