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Properties
| Property Name | Value |
|---|
| TranscriptId | 306711 |
| Track | FilteredModels2 |
| ProteinId | 306625 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_41 | supercontig | scaffold_41:162705..164352 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9936 ID=mRNA_9936|Name=jgi.p|Nanoce1779_2|306625|organism=Nannochloropsis oceanica|type=mRNA|length=1021bp
TGTGCTAATCAAATGGAGATCTTCCTACCTCCCGGCCTCCCTCCCTCCCT
CCCTAGGCCCTATCCGCAGCGGGTTGGAGTTCACTGCTGACCGTCTCCTG
CGAGCCTCCTCGTCCATCTCGGACAAGGACCCGCCTGGGAAAAGGGCAGG
ACAGCAGCAGCAGCAGCAGCGGTTCAGTATTTGCCATGGGCGGAGGTGGG
GCCACTGCCACGGTCACGGCCTTGTCGACGGACGTGGGCCTCGGCCTCGG
CCTTTGGGGGGGACGGCAGGACGCTGAGCTCTCCTTTTCCTCGGGCCTGG
CATTCGTCCACGATCCCCGCCTCCCCTCCCCTCCCTCCCTCCACCTCGAC
CACGGTCAGGCCTTCCAAAGGATGCAGGCAGTCACCACCTGGCAGCATCC
GCTCCCCCTCGGCCTCATCCTCGGCTCCCGCAGCCTCGCCTACTGGGCCT
CCCGGGCCATACCCCCCTACCTGGCCTACCGCATGGGGGGGCACCGCTTC
TACGTCCGCGGCTACGACGACAATGACTTCGCGCCATTTTCCTCACTGCA
GGGAACCACCCTGGAAGTGCGCTTGCCCCTAATGCTGACGGCTTCAGGCA
CGCGCATCGGCCTCTCGGCCTCAGCATTCGTCGATTACGCGACCGGAGCC
TCCCTCCCTGCCTCCTCCTCGTCTTCCGCCCCTTCCTCCTCCTCCGCCGT
GCCCTCTCTCTTGTCTCAGTACATGGCCAAGGGGGAGGAGTTCGTCGCGG
GAGGGCTGGGGTTGAAGGCCGGACCCATCAAAATCGATTGGGCCGTGAAC
AAGAGGGGGGAGGGAAAGGTACACGTCTCCCTCGCGGATCCCTCCTTTTA
AAAAGTCTTGCGACTCCCTCCCTTTTTTGGCCTCCTTCTTTCCCTCTCCC
CCTCCCTCCCTCCCTCGTGTGCGGGAAGGTGGAGGCGAAGGAGGAGTGGG
AAGAGAATTTAGGGTGGGATGGAGGGATGAAAAGAGGCAGGGATGGAAGG
AGAGAAAGTCAGGTTGTACAT back to topprotein sequence of jgi.p|Nanoce1779_2|306625 >mRNA_9936-protein ID=mRNA_9936-protein|Name=jgi.p|Nanoce1779_2|306625|organism=Nannochloropsis oceanica|type=polypeptide|length=222bp
MGGGGATATVTALSTDVGLGLGLWGGRQDAELSFSSGLAFVHDPRLPSPP
SLHLDHGQAFQRMQAVTTWQHPLPLGLILGSRSLAYWASRAIPPYLAYRM
GGHRFYVRGYDDNDFAPFSSLQGTTLEVRLPLMLTASGTRIGLSASAFVD
YATGASLPASSSSSAPSSSSAVPSLLSQYMAKGEEFVAGGLGLKAGPIKI
DWAVNKRGEGKVHVSLADPSF* back to topmRNA from alignment at scaffold_41:162705..164352- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9936 ID=mRNA_9936|Name=jgi.p|Nanoce1779_2|306625|organism=Nannochloropsis oceanica|type=mRNA|length=1648bp|location=Sequence derived from alignment at scaffold_41:162705..164352- (Nannochloropsis oceanica)
TGTGCTAATCAAATGGAGATCTTCCTACCTCCCGGCCTCCCTCCCTCCCT
CCCTAGGCCCTATCCGCAGCGGGTTGGAGTTCACTGCTGACCGTCTCCTG
CGAGCCTCCTCGTCCATCTCGGACAAGGACCCGCCTGGGAAAAGGGCAGG
ACAGCAGCAGCAGCAGCAGCGGTTCAGTATTTGCCATGGGCGGAGGTGCG
CTGTGTGCCCTCTCCCTCCCTCCCGCCCTCCCTTTCACCCTCCCTCCATC
CCCTCCCTCCAACCCGCCCTCCATCCCGCCCTCTCTTTCCTCCTCCCTTC
CTTCTGGATCCAGTCCGCCCGAGGACTTGGAGTCATCTGTCTGTACATCT
TACCCTCCTATCCATTCCTCCCTCCCTCCCTCCTTCCAGGTGGGGCCACT
GCCACGGTCACGGCCTTGTCGACGGACGTGGGCCTCGGCCTCGGCCTTTG
GGGGGGACGGCAGGTACGCCCTCCCTCCCTCCCTTTCTCCCTCCCTCCCT
CTCGCCGAGCATGTCTTGACCCATCACCTCCTCCTTCTCCCCCGCTAACT
CCCCCCCCTCCCTCCCAGGACGCTGAGCTCTCCTTTTCCTCGGGCCTGGC
ATTCGTCCACGATCCCCGCCTCCCCTCCCCTCCCTCCCTCCACCTCGACC
ACGGTCAGGCCTTCCAAAGGATGCAGGCAGTCACCACCTGGCAGCATCCG
CTCCCCCTCGGCCTCATCCTCGGCTCCCGCAGCCTCGCCTACTGGGTATG
TGCCCTCCCTCCCTCCCTCCCTCCCTTGCCTCGTCGCCGTGCGTGTCTGC
CTCGTCGAGCCCCTCGAGTCCGAATGACTCCCATCACCCAACAACCACCA
TCCTCCAAAATTCTTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCACCAGGCCTCCCGGGCCATACCCCCC
TACCTGGCCTACCGCATGGGGGGGCACCGCTTCTACGTCCGCGGCTACGA
CGACAATGACTTCGCGCCATTTTCCTCACTGCAGGGAACCACCCTGGAAG
TGCGCTTGCCCCTAATGCTGACGGCTTCAGGTACGTATCCTCGCCTCCCC
TTCCTTCCTTCCTTCCTTTCCCCCCACCTTCCTTCCTTCTTCCCGATGTC
CCTTCTGCTCACCTTTGCCTCCTTCCCTCCCTCCCTCCCTCACTCCTTTC
TCCCTTCCTTCCCTCCTTCTCCAGGCACGCGCATCGGCCTCTCGGCCTCA
GCATTCGTCGATTACGCGACCGGAGCCTCCCTCCCTGCCTCCTCCTCGTC
TTCCGCCCCTTCCTCCTCCTCCGCCGTGCCCTCTCTCTTGTCTCAGTACA
TGGCCAAGGGGGAGGAGTTCGTCGCGGGAGGGCTGGGGTTGAAGGCCGGA
CCCATCAAAATCGATTGGGCCGTGAACAAGAGGGGGGAGGGAAAGGTACA
CGTCTCCCTCGCGGATCCCTCCTTTTAAAAAGTCTTGCGACTCCCTCCCT
TTTTTGGCCTCCTTCTTTCCCTCTCCCCCTCCCTCCCTCCCTCGTGTGCG
GGAAGGTGGAGGCGAAGGAGGAGTGGGAAGAGAATTTAGGGTGGGATGGA
GGGATGAAAAGAGGCAGGGATGGAAGGAGAGAAAGTCAGGTTGTACAT back to topCoding sequence (CDS) from alignment at scaffold_41:162705..164352- >mRNA_9936 ID=mRNA_9936|Name=jgi.p|Nanoce1779_2|306625|organism=Nannochloropsis oceanica|type=CDS|length=3330bp|location=Sequence derived from alignment at scaffold_41:162705..164352- (Nannochloropsis oceanica)
GCACGCGCATCGGCCTCTCGGCCTCAGCATTCGTCGATTACGCGACCGGA
GCCTCCCTCCCTGCCTCCTCCTCGTCTTCCGCCCCTTCCTCCTCCTCCGC
CGTGCCCTCTCTCTTGTCTCAGTACATGGCCAAGGGGGAGGAGTTCGTCG
CGGGAGGGCTGGGGTTGAAGGCCGGACCCATCAAAATCGATTGGGCCGTG
AACAAGAGGGGGGAGGGAAAGGTACACGTCTCCCTCGCGGATCCCTCCTT
TTAAGCCTCCCGGGCCATACCCCCCTACCTGGCCTACCGCATGGGGGGGC
ACCGCTTCTACGTCCGCGGCTACGACGACAATGACTTCGCGCCATTTTCC
TCACTGCAGGGAACCACCCTGGAAGTGCGCTTGCCCCTAATGCTGACGGC
TTCAGGACGCTGAGCTCTCCTTTTCCTCGGGCCTGGCATTCGTCCACGAT
CCCCGCCTCCCCTCCCCTCCCTCCCTCCACCTCGACCACGGTCAGGCCTT
CCAAAGGATGCAGGCAGTCACCACCTGGCAGCATCCGCTCCCCCTCGGCC
TCATCCTCGGCTCCCGCAGCCTCGCCTACTGGGTGGGGCCACTGCCACGG
TCACGGCCTTGTCGACGGACGTGGGCCTCGGCCTCGGCCTTTGGGGGGGA
CGGCAGATGGGCGGAGGCACGCGCATCGGCCTCTCGGCCTCAGCATTCGT
CGATTACGCGACCGGAGCCTCCCTCCCTGCCTCCTCCTCGTCTTCCGCCC
CTTCCTCCTCCTCCGCCGTGCCCTCTCTCTTGTCTCAGTACATGGCCAAG
GGGGAGGAGTTCGTCGCGGGAGGGCTGGGGTTGAAGGCCGGACCCATCAA
AATCGATTGGGCCGTGAACAAGAGGGGGGAGGGAAAGGTACACGTCTCCC
TCGCGGATCCCTCCTTTTAAGCCTCCCGGGCCATACCCCCCTACCTGGCC
TACCGCATGGGGGGGCACCGCTTCTACGTCCGCGGCTACGACGACAATGA
CTTCGCGCCATTTTCCTCACTGCAGGGAACCACCCTGGAAGTGCGCTTGC
CCCTAATGCTGACGGCTTCAGGACGCTGAGCTCTCCTTTTCCTCGGGCCT
GGCATTCGTCCACGATCCCCGCCTCCCCTCCCCTCCCTCCCTCCACCTCG
ACCACGGTCAGGCCTTCCAAAGGATGCAGGCAGTCACCACCTGGCAGCAT
CCGCTCCCCCTCGGCCTCATCCTCGGCTCCCGCAGCCTCGCCTACTGGGT
GGGGCCACTGCCACGGTCACGGCCTTGTCGACGGACGTGGGCCTCGGCCT
CGGCCTTTGGGGGGGACGGCAGATGGGCGGAGGCACGCGCATCGGCCTCT
CGGCCTCAGCATTCGTCGATTACGCGACCGGAGCCTCCCTCCCTGCCTCC
TCCTCGTCTTCCGCCCCTTCCTCCTCCTCCGCCGTGCCCTCTCTCTTGTC
TCAGTACATGGCCAAGGGGGAGGAGTTCGTCGCGGGAGGGCTGGGGTTGA
AGGCCGGACCCATCAAAATCGATTGGGCCGTGAACAAGAGGGGGGAGGGA
AAGGTACACGTCTCCCTCGCGGATCCCTCCTTTTAAGCCTCCCGGGCCAT
ACCCCCCTACCTGGCCTACCGCATGGGGGGGCACCGCTTCTACGTCCGCG
GCTACGACGACAATGACTTCGCGCCATTTTCCTCACTGCAGGGAACCACC
CTGGAAGTGCGCTTGCCCCTAATGCTGACGGCTTCAGGACGCTGAGCTCT
CCTTTTCCTCGGGCCTGGCATTCGTCCACGATCCCCGCCTCCCCTCCCCT
CCCTCCCTCCACCTCGACCACGGTCAGGCCTTCCAAAGGATGCAGGCAGT
CACCACCTGGCAGCATCCGCTCCCCCTCGGCCTCATCCTCGGCTCCCGCA
GCCTCGCCTACTGGGTGGGGCCACTGCCACGGTCACGGCCTTGTCGACGG
ACGTGGGCCTCGGCCTCGGCCTTTGGGGGGGACGGCAGATGGGCGGAGGC
ACGCGCATCGGCCTCTCGGCCTCAGCATTCGTCGATTACGCGACCGGAGC
CTCCCTCCCTGCCTCCTCCTCGTCTTCCGCCCCTTCCTCCTCCTCCGCCG
TGCCCTCTCTCTTGTCTCAGTACATGGCCAAGGGGGAGGAGTTCGTCGCG
GGAGGGCTGGGGTTGAAGGCCGGACCCATCAAAATCGATTGGGCCGTGAA
CAAGAGGGGGGAGGGAAAGGTACACGTCTCCCTCGCGGATCCCTCCTTTT
AAGCCTCCCGGGCCATACCCCCCTACCTGGCCTACCGCATGGGGGGGCAC
CGCTTCTACGTCCGCGGCTACGACGACAATGACTTCGCGCCATTTTCCTC
ACTGCAGGGAACCACCCTGGAAGTGCGCTTGCCCCTAATGCTGACGGCTT
CAGGACGCTGAGCTCTCCTTTTCCTCGGGCCTGGCATTCGTCCACGATCC
CCGCCTCCCCTCCCCTCCCTCCCTCCACCTCGACCACGGTCAGGCCTTCC
AAAGGATGCAGGCAGTCACCACCTGGCAGCATCCGCTCCCCCTCGGCCTC
ATCCTCGGCTCCCGCAGCCTCGCCTACTGGGTGGGGCCACTGCCACGGTC
ACGGCCTTGTCGACGGACGTGGGCCTCGGCCTCGGCCTTTGGGGGGGACG
GCAGATGGGCGGAGGCACGCGCATCGGCCTCTCGGCCTCAGCATTCGTCG
ATTACGCGACCGGAGCCTCCCTCCCTGCCTCCTCCTCGTCTTCCGCCCCT
TCCTCCTCCTCCGCCGTGCCCTCTCTCTTGTCTCAGTACATGGCCAAGGG
GGAGGAGTTCGTCGCGGGAGGGCTGGGGTTGAAGGCCGGACCCATCAAAA
TCGATTGGGCCGTGAACAAGAGGGGGGAGGGAAAGGTACACGTCTCCCTC
GCGGATCCCTCCTTTTAAGCCTCCCGGGCCATACCCCCCTACCTGGCCTA
CCGCATGGGGGGGCACCGCTTCTACGTCCGCGGCTACGACGACAATGACT
TCGCGCCATTTTCCTCACTGCAGGGAACCACCCTGGAAGTGCGCTTGCCC
CTAATGCTGACGGCTTCAGGACGCTGAGCTCTCCTTTTCCTCGGGCCTGG
CATTCGTCCACGATCCCCGCCTCCCCTCCCCTCCCTCCCTCCACCTCGAC
CACGGTCAGGCCTTCCAAAGGATGCAGGCAGTCACCACCTGGCAGCATCC
GCTCCCCCTCGGCCTCATCCTCGGCTCCCGCAGCCTCGCCTACTGGGTGG
GGCCACTGCCACGGTCACGGCCTTGTCGACGGACGTGGGCCTCGGCCTCG
GCCTTTGGGGGGGACGGCAGATGGGCGGAG back to top
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