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Properties
| Property Name | Value |
|---|
| TranscriptId | 306168 |
| Track | FilteredModels2 |
| ProteinId | 306082 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_41 | supercontig | scaffold_41:107475..110421 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9924 ID=mRNA_9924|Name=jgi.p|Nanoce1779_2|306082|organism=Nannochloropsis oceanica|type=mRNA|length=875bp
ACCCCTTCCTCCCTCACACTCCCTCCCTCGACACAGCAATAATTGAGTAC
TTAGGTCACGGTCAAGACCTTGCCACCTTCGCCGCCCTGTCCTGCCCTTC
CCTCTTCCCGCCCCTGCTCATCCCTCCACCTCATCAATCATCGAGGAAAC
GGAAGCATGAAATTTTTGGACTTTGAGCGCCTGGGACTACTCAGTGCCGC
CTTGGCCAACAAGCACGTGGGTGACAAAGTGTTAATGGGAAGGATAGAAG
CTTACTCCTGCAAGCCCCTCTCGGACGACAAGAGGATAAAAAAAGAATTA
GAAAGCGACCTGGGAGGTAGTAACGGTGCTCTGGGTGCCACCGGAGGCGG
CCTCGCTGGCTCCCTCCCTACCACTCACCACCTCCAAAGCAGCAACAGCA
GCAGCTGCAGCAACAGCAACAGCATCAATGCTGGCTTATGTCAATCCTCT
GTCCCTCCTTCCCTCCCTTCCTCCTTCACTTCCTCCATTTCCAGAATACC
CCCATCGGGCTCCGGCTTTCGCGCGGGTTCCATGCCCACCGGTTTTTCGT
CCGCTGCTGGAGGGGCTTCCTCCCTCTTCCTCTCCTCTTCCTCCGCCGGC
ACCTCGGCCTCCTCCCCCCTTGGTGACCTGTCCGATTCCGCGACGCGCAA
GCTCTTGGTCTACCTCATCTCGACCCTCAACGCCGCCTTTCCAGACTACG
ACTTCAGCGGCGTGCGGTCTGAGCAATTCTTGAAGGAGCCAGATCTACGA
CTGGTGGTCCTTCAACTATTTCTTTGTCAATCGACGCATGAAGAGGATCG
TCTTCTTTAGCTGTATTGTCAAGAGCAAATACCAGGCCTCGATGGAGGAG
GGGGGGGACGATACGGACATGGGCG back to topprotein sequence of jgi.p|Nanoce1779_2|306082 >mRNA_9924-protein ID=mRNA_9924-protein|Name=jgi.p|Nanoce1779_2|306082|organism=Nannochloropsis oceanica|type=polypeptide|length=218bp
MKFLDFERLGLLSAALANKHVGDKVLMGRIEAYSCKPLSDDKRIKKELES
DLGGSNGALGATGGGLAGSLPTTHHLQSSNSSSCSNSNSINAGLCQSSVP
PSLPSSFTSSISRIPPSGSGFRAGSMPTGFSSAAGGASSLFLSSSSAGTS
ASSPLGDLSDSATRKLLVYLISTLNAAFPDYDFSGVRSEQFLKEPDLRLV
VLQLFLCQSTHEEDRLL* back to topmRNA from alignment at scaffold_41:107475..110421- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9924 ID=mRNA_9924|Name=jgi.p|Nanoce1779_2|306082|organism=Nannochloropsis oceanica|type=mRNA|length=2947bp|location=Sequence derived from alignment at scaffold_41:107475..110421- (Nannochloropsis oceanica)
ACCCCTTCCTCCCTCACACTCCCTCCCTCGACACAGCAATAATTGAGTAC
TTAGGTCACGGTCAAGACCTTGCCACCTTCGCCGCCCTGTCCTGCCCTTC
CCTCTTCCCGCCCCTGCTCATCCCTCCACCTCATCAATCATCGAGGAAAC
GGAAGCATGAAATTTTTGGACTTTGAGCGCCTGGGACTACTCAGTGCCGC
CTTGGCCAACAAGCACGTGGGTGACAAAGTGTTAATGGGAAGGATAGAAG
CTTACTCCTGTAAGTCCTCCTTCCCCTCCTCCATCCCTTCCTCCCTCCCT
TCCTCCCTCCTTCCCTCCGTTTGAGAAAAGAGCGCCTCTTTTGAAAGCCC
TTTCTCATCTCCCTCCTCCCTTCCTTCCATCCTTCCTCCCTCCCTTCCTT
CCTTCATTCCTCCCTCCTCCTCGCAGGCAAGCCCCTCTCGGACGACAAGA
GGATAAAAAAAGAATTAGAAAGCGACCTGGGAGGTAGGGAGGGAAGGTGG
GAGGGAAAGAGGAAGGCATGGAGGGAGGCGCAAACGTCACGGAGCCTATT
CTCACCTCTGTCTATTCTCCCACCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCCCCCTCCCTCACCACAGGTAGTAACGGTGCTCTGGGTGCCA
CCGGAGGCGGCCTCGCTGGCTCCCTCCCTACCACTCACCACCTCCAAAGC
AGCAACAGCAGCAGCTGCAGCAACAGCAACAGCATCAATGCTGGCTTATG
TCAATCCTCTGTCCCTCCTTCCCTCCCTTCCTCCTTCACTTCCTCCATTT
CCAGAATACCCCCATCGGGCTCCGGCTTTCGGTACGTCCCCCCCTTCCCT
CCCTCCCTCCCTCCCTCCCCCCTTTCCTCCCTCCCTCCTTCCCTCCCTGC
CTTTCCCCACTTTTTTCCGTCCTAGCCATAGCTCACATCCATCCTCCCTC
CCTCCCTCCCTCCCCCCTTCCCTCCCTCCCTCCCTCCCTCCATTCCCAGC
GCGGGTTCCATGCCCACCGGTTTTTCGTCCGCTGCTGGAGGGGCTTCCTC
CCTCTTCCTCTCCTCTTCCTCCGCCGGCACCTCGGCCTCCTCCCCCCTTG
GTGACCTGTCCGATTCCGCGACGCGCAAGGTGGGGAGGGAGGGAGGGAGG
GGGGGAGGGAGGGAGGGAGGGAGGGAAGTAATGGATGCAATTGGAGGTGT
AAGTGAAACGAATCAATCCTAACCCTGTCTCGCATTGCTTCCCTCCCTCC
CTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCCCTCCCTCCCT
CCCTCCCTCCCTCCAGCTCTTGGTCTACCTCATCTCGACCCTCAACGCCG
CCTTTCCAGACTACGACTTCAGGTACCCTCCCTCTCTCCCTCCCTCCCTC
CTTTCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTTCTTTCTTTCTTCCTT
TTCTCCCTCCCATCAATGTTCCCAACACCCTCTTTTGGCCTCATTCCCCC
CCCTCCCTCCGTCACTCACTCCCTCTCTCCCTCCCTACCTCCTTCCCTCC
CTTCCTTCTTCTCTTCCACTCTCTCTTTTCTTTCCCGTATCAATCAACCT
CACCCCCCTTCCTCCCTACCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTC
CTAGCGGCGTGCGGTCTGAGCAATTCTTGAAGGAGCCAGATCTACGACTG
GTGCGTTTCTTGAACGAGGGAGGGAAAGAGGGAGAGAGGGAGGGTAGGAA
GAGGTGTGTGTCGAGAAGGGGGGAGGGAGGGAGGGAGGGAGTGAAGGAGG
ATGGGAAGCAGGAGGTATGTGTCGAGAAGGGAATGGCGTTTGGGATGAAG
CTTCTTCTTTAGCGTGTACTTACCGATCGCCGCCCTTCCTCCCTCCTTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTAGGT
CATGAGCGATGTCAACCGCCACTTGACGGAGCTGGGGGATGCCGTGCCGC
CTACGTTCCTCGAGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGAAAGATGGAACGGCGTTGTGTAAGTTCAGAAGGGTATCTCT
CCTTCCCTCCCTCCCCCCCCCCCCTTCCCTCCCTCCTTCCCTCCCCCGCC
ATCGATGAAGCTCGAAGCAGGACGTTCAAACTCCCCCCTCCCTCCCTCCC
TCCCTCCCTCCTTCCCTCAGGAAATGTGGGCTGCCATCGACGAGGCTCTT
GGCGTGACGCTCAAGGACTGCGAGATCTACTCCTACCTCCCTGATATGGA
GGGCGATCCTTTCTCCTACAACTTGTGTGTACCCTCCCCTCCCTCCAGCC
CTCCCGCCCTCCCTCCCTCTCGCCCTCCCTCCCGCCCTCCCTCCCTCCCT
TCCTCCTTTTCTTGTTTGTTCGATGGGAGAGTCAACGTTTAGCACGGAGA
TTTTCTCTACTGTACACCCGTCATCCCTTCCTCCTTCCCTCCCTTCTTCC
CTTGCTTCCCTCCGACGACTGGATAACTGACACTCCCCTTCCTTCCCTCC
CTCCCTCCCGCCCTTTACCCCTCCCTCACTACCTTCGCAGGTGGTCCTTC
AACTATTTCTTTGTCAATCGACGCATGAAGAGGATCGTCTTCTTTAGCTG
TATTGTCAAGAGGTGCGAAAGAGAGGGAGGGAGGGAAGAAGGGAGGGCAA
GAACTCTCATAGCGAACTTGGATCAAGTGAAACGATAGATCGCGAAGGAG
GAAGGAGGGTCCGACTCTGACAAGGATGAGATCAACTCCCTCCCTCTCTC
ACACTCTCTCCCTCCTTCCCTTCCTCGATCCCTCCCTCCCACTGCAGCAA
ATACCAGGCCTCGATGGAGGAGGGGGGGGACGATACGGACATGGGCG back to topCoding sequence (CDS) from alignment at scaffold_41:107475..110421- >mRNA_9924 ID=mRNA_9924|Name=jgi.p|Nanoce1779_2|306082|organism=Nannochloropsis oceanica|type=CDS|length=4578bp|location=Sequence derived from alignment at scaffold_41:107475..110421- (Nannochloropsis oceanica)
GTGGTCCTTCAACTATTTCTTTGTCAATCGACGCATGAAGAGGATCGTCT
TCTTTAGCGGCGTGCGGTCTGAGCAATTCTTGAAGGAGCCAGATCTACGA
CTGCTCTTGGTCTACCTCATCTCGACCCTCAACGCCGCCTTTCCAGACTA
CGACTTCAGCGCGGGTTCCATGCCCACCGGTTTTTCGTCCGCTGCTGGAG
GGGCTTCCTCCCTCTTCCTCTCCTCTTCCTCCGCCGGCACCTCGGCCTCC
TCCCCCCTTGGTGACCTGTCCGATTCCGCGACGCGCAAGGTAGTAACGGT
GCTCTGGGTGCCACCGGAGGCGGCCTCGCTGGCTCCCTCCCTACCACTCA
CCACCTCCAAAGCAGCAACAGCAGCAGCTGCAGCAACAGCAACAGCATCA
ATGCTGGCTTATGTCAATCCTCTGTCCCTCCTTCCCTCCCTTCCTCCTTC
ACTTCCTCCATTTCCAGAATACCCCCATCGGGCTCCGGCTTTCGGCAAGC
CCCTCTCGGACGACAAGAGGATAAAAAAAGAATTAGAAAGCGACCTGGGA
GATGAAATTTTTGGACTTTGAGCGCCTGGGACTACTCAGTGCCGCCTTGG
CCAACAAGCACGTGGGTGACAAAGTGTTAATGGGAAGGATAGAAGCTTAC
TCCTGTGGTCCTTCAACTATTTCTTTGTCAATCGACGCATGAAGAGGATC
GTCTTCTTTAGCGGCGTGCGGTCTGAGCAATTCTTGAAGGAGCCAGATCT
ACGACTGCTCTTGGTCTACCTCATCTCGACCCTCAACGCCGCCTTTCCAG
ACTACGACTTCAGCGCGGGTTCCATGCCCACCGGTTTTTCGTCCGCTGCT
GGAGGGGCTTCCTCCCTCTTCCTCTCCTCTTCCTCCGCCGGCACCTCGGC
CTCCTCCCCCCTTGGTGACCTGTCCGATTCCGCGACGCGCAAGGTAGTAA
CGGTGCTCTGGGTGCCACCGGAGGCGGCCTCGCTGGCTCCCTCCCTACCA
CTCACCACCTCCAAAGCAGCAACAGCAGCAGCTGCAGCAACAGCAACAGC
ATCAATGCTGGCTTATGTCAATCCTCTGTCCCTCCTTCCCTCCCTTCCTC
CTTCACTTCCTCCATTTCCAGAATACCCCCATCGGGCTCCGGCTTTCGGC
AAGCCCCTCTCGGACGACAAGAGGATAAAAAAAGAATTAGAAAGCGACCT
GGGAGATGAAATTTTTGGACTTTGAGCGCCTGGGACTACTCAGTGCCGCC
TTGGCCAACAAGCACGTGGGTGACAAAGTGTTAATGGGAAGGATAGAAGC
TTACTCCTGTGGTCCTTCAACTATTTCTTTGTCAATCGACGCATGAAGAG
GATCGTCTTCTTTAGCGGCGTGCGGTCTGAGCAATTCTTGAAGGAGCCAG
ATCTACGACTGCTCTTGGTCTACCTCATCTCGACCCTCAACGCCGCCTTT
CCAGACTACGACTTCAGCGCGGGTTCCATGCCCACCGGTTTTTCGTCCGC
TGCTGGAGGGGCTTCCTCCCTCTTCCTCTCCTCTTCCTCCGCCGGCACCT
CGGCCTCCTCCCCCCTTGGTGACCTGTCCGATTCCGCGACGCGCAAGGTA
GTAACGGTGCTCTGGGTGCCACCGGAGGCGGCCTCGCTGGCTCCCTCCCT
ACCACTCACCACCTCCAAAGCAGCAACAGCAGCAGCTGCAGCAACAGCAA
CAGCATCAATGCTGGCTTATGTCAATCCTCTGTCCCTCCTTCCCTCCCTT
CCTCCTTCACTTCCTCCATTTCCAGAATACCCCCATCGGGCTCCGGCTTT
CGGCAAGCCCCTCTCGGACGACAAGAGGATAAAAAAAGAATTAGAAAGCG
ACCTGGGAGATGAAATTTTTGGACTTTGAGCGCCTGGGACTACTCAGTGC
CGCCTTGGCCAACAAGCACGTGGGTGACAAAGTGTTAATGGGAAGGATAG
AAGCTTACTCCTGTGGTCCTTCAACTATTTCTTTGTCAATCGACGCATGA
AGAGGATCGTCTTCTTTAGCGGCGTGCGGTCTGAGCAATTCTTGAAGGAG
CCAGATCTACGACTGCTCTTGGTCTACCTCATCTCGACCCTCAACGCCGC
CTTTCCAGACTACGACTTCAGCGCGGGTTCCATGCCCACCGGTTTTTCGT
CCGCTGCTGGAGGGGCTTCCTCCCTCTTCCTCTCCTCTTCCTCCGCCGGC
ACCTCGGCCTCCTCCCCCCTTGGTGACCTGTCCGATTCCGCGACGCGCAA
GGTAGTAACGGTGCTCTGGGTGCCACCGGAGGCGGCCTCGCTGGCTCCCT
CCCTACCACTCACCACCTCCAAAGCAGCAACAGCAGCAGCTGCAGCAACA
GCAACAGCATCAATGCTGGCTTATGTCAATCCTCTGTCCCTCCTTCCCTC
CCTTCCTCCTTCACTTCCTCCATTTCCAGAATACCCCCATCGGGCTCCGG
CTTTCGGCAAGCCCCTCTCGGACGACAAGAGGATAAAAAAAGAATTAGAA
AGCGACCTGGGAGATGAAATTTTTGGACTTTGAGCGCCTGGGACTACTCA
GTGCCGCCTTGGCCAACAAGCACGTGGGTGACAAAGTGTTAATGGGAAGG
ATAGAAGCTTACTCCTGTGGTCCTTCAACTATTTCTTTGTCAATCGACGC
ATGAAGAGGATCGTCTTCTTTAGCGGCGTGCGGTCTGAGCAATTCTTGAA
GGAGCCAGATCTACGACTGCTCTTGGTCTACCTCATCTCGACCCTCAACG
CCGCCTTTCCAGACTACGACTTCAGCGCGGGTTCCATGCCCACCGGTTTT
TCGTCCGCTGCTGGAGGGGCTTCCTCCCTCTTCCTCTCCTCTTCCTCCGC
CGGCACCTCGGCCTCCTCCCCCCTTGGTGACCTGTCCGATTCCGCGACGC
GCAAGGTAGTAACGGTGCTCTGGGTGCCACCGGAGGCGGCCTCGCTGGCT
CCCTCCCTACCACTCACCACCTCCAAAGCAGCAACAGCAGCAGCTGCAGC
AACAGCAACAGCATCAATGCTGGCTTATGTCAATCCTCTGTCCCTCCTTC
CCTCCCTTCCTCCTTCACTTCCTCCATTTCCAGAATACCCCCATCGGGCT
CCGGCTTTCGGCAAGCCCCTCTCGGACGACAAGAGGATAAAAAAAGAATT
AGAAAGCGACCTGGGAGATGAAATTTTTGGACTTTGAGCGCCTGGGACTA
CTCAGTGCCGCCTTGGCCAACAAGCACGTGGGTGACAAAGTGTTAATGGG
AAGGATAGAAGCTTACTCCTGTGGTCCTTCAACTATTTCTTTGTCAATCG
ACGCATGAAGAGGATCGTCTTCTTTAGCGGCGTGCGGTCTGAGCAATTCT
TGAAGGAGCCAGATCTACGACTGCTCTTGGTCTACCTCATCTCGACCCTC
AACGCCGCCTTTCCAGACTACGACTTCAGCGCGGGTTCCATGCCCACCGG
TTTTTCGTCCGCTGCTGGAGGGGCTTCCTCCCTCTTCCTCTCCTCTTCCT
CCGCCGGCACCTCGGCCTCCTCCCCCCTTGGTGACCTGTCCGATTCCGCG
ACGCGCAAGGTAGTAACGGTGCTCTGGGTGCCACCGGAGGCGGCCTCGCT
GGCTCCCTCCCTACCACTCACCACCTCCAAAGCAGCAACAGCAGCAGCTG
CAGCAACAGCAACAGCATCAATGCTGGCTTATGTCAATCCTCTGTCCCTC
CTTCCCTCCCTTCCTCCTTCACTTCCTCCATTTCCAGAATACCCCCATCG
GGCTCCGGCTTTCGGCAAGCCCCTCTCGGACGACAAGAGGATAAAAAAAG
AATTAGAAAGCGACCTGGGAGATGAAATTTTTGGACTTTGAGCGCCTGGG
ACTACTCAGTGCCGCCTTGGCCAACAAGCACGTGGGTGACAAAGTGTTAA
TGGGAAGGATAGAAGCTTACTCCTGTGGTCCTTCAACTATTTCTTTGTCA
ATCGACGCATGAAGAGGATCGTCTTCTTTAGCGGCGTGCGGTCTGAGCAA
TTCTTGAAGGAGCCAGATCTACGACTGCTCTTGGTCTACCTCATCTCGAC
CCTCAACGCCGCCTTTCCAGACTACGACTTCAGCGCGGGTTCCATGCCCA
CCGGTTTTTCGTCCGCTGCTGGAGGGGCTTCCTCCCTCTTCCTCTCCTCT
TCCTCCGCCGGCACCTCGGCCTCCTCCCCCCTTGGTGACCTGTCCGATTC
CGCGACGCGCAAGGTAGTAACGGTGCTCTGGGTGCCACCGGAGGCGGCCT
CGCTGGCTCCCTCCCTACCACTCACCACCTCCAAAGCAGCAACAGCAGCA
GCTGCAGCAACAGCAACAGCATCAATGCTGGCTTATGTCAATCCTCTGTC
CCTCCTTCCCTCCCTTCCTCCTTCACTTCCTCCATTTCCAGAATACCCCC
ATCGGGCTCCGGCTTTCGGCAAGCCCCTCTCGGACGACAAGAGGATAAAA
AAAGAATTAGAAAGCGACCTGGGAGATGAAATTTTTGGACTTTGAGCGCC
TGGGACTACTCAGTGCCGCCTTGGCCAACAAGCACGTGGGTGACAAAGTG
TTAATGGGAAGGATAGAAGCTTACTCCT back to top
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