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Properties
| Property Name | Value |
|---|
| TranscriptId | 608356 |
| Track | FilteredModels2 |
| ProteinId | 608270 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_41 | supercontig | scaffold_41:37297..39789 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9905 ID=mRNA_9905|Name=jgi.p|Nanoce1779_2|608270|organism=Nannochloropsis oceanica|type=mRNA|length=788bp
GCTTCCTACAGCTGCTACTGCTGCTGCCGCTGGTGGTGGGGGTGTTGGGG
GTGGCACTGCTATTGCTTTAGCTGCGGATGAGGAGGAGGAGGAGGCGGAG
GAGGAGGTTGGATGGGGAGGGAAGTCAAACTCGCATTGTCCGAAATCGCC
GATTTTGATGACGAAGGAGGAGAGGATGCCATTCTTAAACAAGTCCTTGG
GCTCAGGGAGGACTTTGACCATGATGTTGTCGTAGCGGAGATCGAAATGT
TGGAGGCCGGCGGTGCGTCGGAGCTGCTCTACTCCAAAGGCTACCTGATA
GAGAAGGTTGTACAGATTAATGGGCTCATCGAGGTCAATGGCCTCAGCAT
CGGCCTCTATGAACTCCATGACAATGATGAACTGCTTGTTATCCACGCTC
TTGCCAATGTCGAGAGTGCGAACGTAGAAGGGACCACCGCCGCCCTGCCC
CAGGAGGCTCGTCCCTACCACATTTCCGCATATCTCATGGAAGGGGTAGT
CGTCGAAGAATTTAGCCACTACAGCCTCGCCCTCCGTCACCACTTTGTAG
ACCACGCCCTCCTTCAATTCCTCCCATACGGCATCCTTTCCTCGAAGCTT
CCGGTGGAGCTTGCTATTCTCCGCGCGGCTGCTTATGTGCTCCTCCATTG
CAACCCTGTCCCCCCTTCGAAATGCGTGCAAGAGTTTTTGCATTCGGACC
TCATTTCTGAACTTGGACATGCTGCCACTACTGTCGTTGCTCCCCGAGTT
TGAAGGGCCCATTCTGCGACGCTATGGCCCTGTTGCTG back to topprotein sequence of jgi.p|Nanoce1779_2|608270 >mRNA_9905-protein ID=mRNA_9905-protein|Name=jgi.p|Nanoce1779_2|608270|organism=Nannochloropsis oceanica|type=polypeptide|length=214bp
MGREVKLALSEIADFDDEGGEDAILKQVLGLREDFDHDVVVAEIEMLEAG
GASELLYSKGYLIEKVVQINGLIEVNGLSIGLYELHDNDELLVIHALANV
ESANVEGTTAALPQEARPYHISAYLMEGVVVEEFSHYSLALRHHFVDHAL
LQFLPYGILSSKLPVELAILRAAAYVLLHCNPVPPSKCVQEFLHSDLISE
LGHAATTVVAPRV* back to topmRNA from alignment at scaffold_41:37297..39789- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9905 ID=mRNA_9905|Name=jgi.p|Nanoce1779_2|608270|organism=Nannochloropsis oceanica|type=mRNA|length=2493bp|location=Sequence derived from alignment at scaffold_41:37297..39789- (Nannochloropsis oceanica)
GCTTCCTACAGCTGCTACTGCTGCTGCCGCTGGTGGTGGGGGTGTTGGGG
GTGGCACTGCTATTGCTTTAGCTGCGGATGAGGAGGAGGAGGAGGCGGAG
GAGGAGGTTGGATGGGGAGGGAAGTCAAACTCGCACTAGAAAGGAGGAAG
GGAGGGAGGGAGGAGAGGAGGGAGGGATATGTCGGTCGGATGAAATGTGC
CTTTCTCACCGTTGTGTTTCACTCAAGGCTCATTCAAGTGGACCCGTTCG
GGAGGGAGAAAGGAAGAGAGGGAGGGGAAAAGGAAAGAAGGGAGAGAGGG
AGGAAGGGAGGGAAGGAGGAGACATGTACTTGTCCGAAATCGCCGATTTT
GATGACGAAGGAGGAGAGGATGCCATTCTTAAACAAGTCCTTGGGCTCAG
GGAGGACTTTGACCATGATGTTGTCGTAGCTACGGAGGGAGGGAGGGAGG
GAGGGAGGGACGGAGGGAGGTGGAGGTCGTCGGTGAGGGAGGAAGTAGGA
CTCGAGCAGATGGACATGAGGGGGAGGAAGGAGAGAGGGAAGGAGGGATG
GATGGAGGGTTGGACGGAGGGATGGGCGGAGGGGGTAGTGATGGAAGAGG
TACCGGAGATCGAAATGTTGGAGGCCGGCGGTGCGTCGGAGCTGCTCTAC
TCCAAAGGCTACCTGAGGGAGGGAGGGGGGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGTATGAACTCAGTGGGAGGGAGGGAGGAAGGAAAGGAGGTA
GGGCAGAGGGCAGGGAGGGAGGGAGGGAGGGAGGGAAGGAAGGGGGGAAC
TTACCTGATAGAGAAGGTTGTACAGATTAATGGGCTCATCGAGGTCAATG
GCCTGAGGGAGGGAGGGAGGGAGGGAGGGTGTAAATGAAGGGATGAGGAT
AGTTCAGAAACTGTCCGGGAGGGTAAGCGGGAGGGAGGGAGGGAGGGAGG
GAGGGAAGGGGGGAGAGAGGGGCAAAACGGACCTCAGCATCGGCCTCTAT
GAACTCCATGACAATGATGAACTGCTTGTTATCCACGCTCTTGCCAATGT
CGAGAGTGCGAACGTAGAAGGGACCACCGCCGCCCTAAGAAAGAGGGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GTTGAAATGATGACTTGAGAGGGAAGGAGGGAGGGGGAGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAAGGAAGATAAGGCATCAAAAGGAAACAGGGGC
GCTCAGAGGTAGGGCCCCTCCATCCACCCACAGATTTCAGATTTTATTAC
TAGCGAAGGAGGGAGGGAGGGAAGGAAGGAGGGAGGGAGGGAGGGGGGGG
AGGGGGGGGGGGGAGGGAGGGAGGAAGGGAGGGGGGGGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGAGGGAG
GGAAGGAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGA
AGGAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGACGCACCTGC
CCCAGGAGGCTCGTCCCTACCACATTTCCGCATATCTCATGGAAGGGGTA
GTCGTCGAAGAATTTAGCCACTACAGCCTCGCCCTCCGTCACCACCTTGT
GCACGGGGAGGAGGGAGGGGATGGATAGAGGGTTGATTTGCATAGAGGCA
ATTGAATCACGGGATGGGTAGAAAATGCGGGGTCGAGGAGGCATCCACCT
TCATCTCCCACCTTCCCGTCCTCCCTCCCTCCCGCCCTCGGTACTTTGTA
GACCACGCCCTCCTTCAATTCCTCCCATACGGCATCCTTTCCTCGAAGCT
TCCGGTGGAGCTTGCTATTCTCCGCGCGGCTGCTTATGTGCTTTGGTAGT
ACGGAAGGGGGGGACAGGAGGGAGGAACGGAAGGAAGAAGGGAAGGAAGG
AGGGAAGGAAGAATGATGATTGTAATTTCCTGGTGCAGATTCTTGGTACC
CCTATCATTCTTTTTACCTCCTCCATTGCAACCCTGTCCCCCCTTCGAAA
TGCGTGCAAGAGTTTTTGCATTCGGACCTCATTTCTATACAGGGCAAAAT
GCATTTGTGTGGGGAGGGAGACGTGAGTCTTTGGAGCTTTCTTCTTCCCA
GCTCATCACTCCCTTGTTCGCTTTTCTCATGTAATGTCATTCAAAATGAG
AGGGGAAATACACGAGAGCATTCGTCCATGCATTCGAGTGAAAGTAACGA
TGTTGGCTACTCTAGTCCCACCCTTGGGGTGGCACAATGCTACCTCCTCC
CCTCGCTACCCGTCTTTCCCTCCTCCTTCCCATACTCCTCCAGCGTTTCA
CTCCTAGCTACCTGAACTTGGACATGCTGCCACTACTGTCGTTGCTCCCC
GAGTTTGAAGGGCCCATTCTGCGACGCTATGGCCCTGTTGCTG back to topCoding sequence (CDS) from alignment at scaffold_41:37297..39789- >mRNA_9905 ID=mRNA_9905|Name=jgi.p|Nanoce1779_2|608270|organism=Nannochloropsis oceanica|type=CDS|length=5778bp|location=Sequence derived from alignment at scaffold_41:37297..39789- (Nannochloropsis oceanica)
CTGAACTTGGACATGCTGCCACTACTGTCGTTGCTCCCCGAGTTTGACTC
CTCCATTGCAACCCTGTCCCCCCTTCGAAATGCGTGCAAGAGTTTTTGCA
TTCGGACCTCATTTTTTGTAGACCACGCCCTCCTTCAATTCCTCCCATAC
GGCATCCTTTCCTCGAAGCTTCCGGTGGAGCTTGCTATTCTCCGCGCGGC
TGCTTATGTGCTGCCCCAGGAGGCTCGTCCCTACCACATTTCCGCATATC
TCATGGAAGGGGTAGTCGTCGAAGAATTTAGCCACTACAGCCTCGCCCTC
CGTCACCACCTCAGCATCGGCCTCTATGAACTCCATGACAATGATGAACT
GCTTGTTATCCACGCTCTTGCCAATGTCGAGAGTGCGAACGTAGAAGGGA
CCACCGCCGCCCTGATAGAGAAGGTTGTACAGATTAATGGGCTCATCGAG
GTCAATGGCCGGAGATCGAAATGTTGGAGGCCGGCGGTGCGTCGGAGCTG
CTCTACTCCAAAGGCTACTTGTCCGAAATCGCCGATTTTGATGACGAAGG
AGGAGAGGATGCCATTCTTAAACAAGTCCTTGGGCTCAGGGAGGACTTTG
ACCATGATGTTGTCGTAGATGGGGAGGGAAGTCAAACTCGCACTGAACTT
GGACATGCTGCCACTACTGTCGTTGCTCCCCGAGTTTGACTCCTCCATTG
CAACCCTGTCCCCCCTTCGAAATGCGTGCAAGAGTTTTTGCATTCGGACC
TCATTTTTTGTAGACCACGCCCTCCTTCAATTCCTCCCATACGGCATCCT
TTCCTCGAAGCTTCCGGTGGAGCTTGCTATTCTCCGCGCGGCTGCTTATG
TGCTGCCCCAGGAGGCTCGTCCCTACCACATTTCCGCATATCTCATGGAA
GGGGTAGTCGTCGAAGAATTTAGCCACTACAGCCTCGCCCTCCGTCACCA
CCTCAGCATCGGCCTCTATGAACTCCATGACAATGATGAACTGCTTGTTA
TCCACGCTCTTGCCAATGTCGAGAGTGCGAACGTAGAAGGGACCACCGCC
GCCCTGATAGAGAAGGTTGTACAGATTAATGGGCTCATCGAGGTCAATGG
CCGGAGATCGAAATGTTGGAGGCCGGCGGTGCGTCGGAGCTGCTCTACTC
CAAAGGCTACTTGTCCGAAATCGCCGATTTTGATGACGAAGGAGGAGAGG
ATGCCATTCTTAAACAAGTCCTTGGGCTCAGGGAGGACTTTGACCATGAT
GTTGTCGTAGATGGGGAGGGAAGTCAAACTCGCACTGAACTTGGACATGC
TGCCACTACTGTCGTTGCTCCCCGAGTTTGACTCCTCCATTGCAACCCTG
TCCCCCCTTCGAAATGCGTGCAAGAGTTTTTGCATTCGGACCTCATTTTT
TGTAGACCACGCCCTCCTTCAATTCCTCCCATACGGCATCCTTTCCTCGA
AGCTTCCGGTGGAGCTTGCTATTCTCCGCGCGGCTGCTTATGTGCTGCCC
CAGGAGGCTCGTCCCTACCACATTTCCGCATATCTCATGGAAGGGGTAGT
CGTCGAAGAATTTAGCCACTACAGCCTCGCCCTCCGTCACCACCTCAGCA
TCGGCCTCTATGAACTCCATGACAATGATGAACTGCTTGTTATCCACGCT
CTTGCCAATGTCGAGAGTGCGAACGTAGAAGGGACCACCGCCGCCCTGAT
AGAGAAGGTTGTACAGATTAATGGGCTCATCGAGGTCAATGGCCGGAGAT
CGAAATGTTGGAGGCCGGCGGTGCGTCGGAGCTGCTCTACTCCAAAGGCT
ACTTGTCCGAAATCGCCGATTTTGATGACGAAGGAGGAGAGGATGCCATT
CTTAAACAAGTCCTTGGGCTCAGGGAGGACTTTGACCATGATGTTGTCGT
AGATGGGGAGGGAAGTCAAACTCGCACTGAACTTGGACATGCTGCCACTA
CTGTCGTTGCTCCCCGAGTTTGACTCCTCCATTGCAACCCTGTCCCCCCT
TCGAAATGCGTGCAAGAGTTTTTGCATTCGGACCTCATTTTTTGTAGACC
ACGCCCTCCTTCAATTCCTCCCATACGGCATCCTTTCCTCGAAGCTTCCG
GTGGAGCTTGCTATTCTCCGCGCGGCTGCTTATGTGCTGCCCCAGGAGGC
TCGTCCCTACCACATTTCCGCATATCTCATGGAAGGGGTAGTCGTCGAAG
AATTTAGCCACTACAGCCTCGCCCTCCGTCACCACCTCAGCATCGGCCTC
TATGAACTCCATGACAATGATGAACTGCTTGTTATCCACGCTCTTGCCAA
TGTCGAGAGTGCGAACGTAGAAGGGACCACCGCCGCCCTGATAGAGAAGG
TTGTACAGATTAATGGGCTCATCGAGGTCAATGGCCGGAGATCGAAATGT
TGGAGGCCGGCGGTGCGTCGGAGCTGCTCTACTCCAAAGGCTACTTGTCC
GAAATCGCCGATTTTGATGACGAAGGAGGAGAGGATGCCATTCTTAAACA
AGTCCTTGGGCTCAGGGAGGACTTTGACCATGATGTTGTCGTAGATGGGG
AGGGAAGTCAAACTCGCACTGAACTTGGACATGCTGCCACTACTGTCGTT
GCTCCCCGAGTTTGACTCCTCCATTGCAACCCTGTCCCCCCTTCGAAATG
CGTGCAAGAGTTTTTGCATTCGGACCTCATTTTTTGTAGACCACGCCCTC
CTTCAATTCCTCCCATACGGCATCCTTTCCTCGAAGCTTCCGGTGGAGCT
TGCTATTCTCCGCGCGGCTGCTTATGTGCTGCCCCAGGAGGCTCGTCCCT
ACCACATTTCCGCATATCTCATGGAAGGGGTAGTCGTCGAAGAATTTAGC
CACTACAGCCTCGCCCTCCGTCACCACCTCAGCATCGGCCTCTATGAACT
CCATGACAATGATGAACTGCTTGTTATCCACGCTCTTGCCAATGTCGAGA
GTGCGAACGTAGAAGGGACCACCGCCGCCCTGATAGAGAAGGTTGTACAG
ATTAATGGGCTCATCGAGGTCAATGGCCGGAGATCGAAATGTTGGAGGCC
GGCGGTGCGTCGGAGCTGCTCTACTCCAAAGGCTACTTGTCCGAAATCGC
CGATTTTGATGACGAAGGAGGAGAGGATGCCATTCTTAAACAAGTCCTTG
GGCTCAGGGAGGACTTTGACCATGATGTTGTCGTAGATGGGGAGGGAAGT
CAAACTCGCACTGAACTTGGACATGCTGCCACTACTGTCGTTGCTCCCCG
AGTTTGACTCCTCCATTGCAACCCTGTCCCCCCTTCGAAATGCGTGCAAG
AGTTTTTGCATTCGGACCTCATTTTTTGTAGACCACGCCCTCCTTCAATT
CCTCCCATACGGCATCCTTTCCTCGAAGCTTCCGGTGGAGCTTGCTATTC
TCCGCGCGGCTGCTTATGTGCTGCCCCAGGAGGCTCGTCCCTACCACATT
TCCGCATATCTCATGGAAGGGGTAGTCGTCGAAGAATTTAGCCACTACAG
CCTCGCCCTCCGTCACCACCTCAGCATCGGCCTCTATGAACTCCATGACA
ATGATGAACTGCTTGTTATCCACGCTCTTGCCAATGTCGAGAGTGCGAAC
GTAGAAGGGACCACCGCCGCCCTGATAGAGAAGGTTGTACAGATTAATGG
GCTCATCGAGGTCAATGGCCGGAGATCGAAATGTTGGAGGCCGGCGGTGC
GTCGGAGCTGCTCTACTCCAAAGGCTACTTGTCCGAAATCGCCGATTTTG
ATGACGAAGGAGGAGAGGATGCCATTCTTAAACAAGTCCTTGGGCTCAGG
GAGGACTTTGACCATGATGTTGTCGTAGATGGGGAGGGAAGTCAAACTCG
CACTGAACTTGGACATGCTGCCACTACTGTCGTTGCTCCCCGAGTTTGAC
TCCTCCATTGCAACCCTGTCCCCCCTTCGAAATGCGTGCAAGAGTTTTTG
CATTCGGACCTCATTTTTTGTAGACCACGCCCTCCTTCAATTCCTCCCAT
ACGGCATCCTTTCCTCGAAGCTTCCGGTGGAGCTTGCTATTCTCCGCGCG
GCTGCTTATGTGCTGCCCCAGGAGGCTCGTCCCTACCACATTTCCGCATA
TCTCATGGAAGGGGTAGTCGTCGAAGAATTTAGCCACTACAGCCTCGCCC
TCCGTCACCACCTCAGCATCGGCCTCTATGAACTCCATGACAATGATGAA
CTGCTTGTTATCCACGCTCTTGCCAATGTCGAGAGTGCGAACGTAGAAGG
GACCACCGCCGCCCTGATAGAGAAGGTTGTACAGATTAATGGGCTCATCG
AGGTCAATGGCCGGAGATCGAAATGTTGGAGGCCGGCGGTGCGTCGGAGC
TGCTCTACTCCAAAGGCTACTTGTCCGAAATCGCCGATTTTGATGACGAA
GGAGGAGAGGATGCCATTCTTAAACAAGTCCTTGGGCTCAGGGAGGACTT
TGACCATGATGTTGTCGTAGATGGGGAGGGAAGTCAAACTCGCACTGAAC
TTGGACATGCTGCCACTACTGTCGTTGCTCCCCGAGTTTGACTCCTCCAT
TGCAACCCTGTCCCCCCTTCGAAATGCGTGCAAGAGTTTTTGCATTCGGA
CCTCATTTTTTGTAGACCACGCCCTCCTTCAATTCCTCCCATACGGCATC
CTTTCCTCGAAGCTTCCGGTGGAGCTTGCTATTCTCCGCGCGGCTGCTTA
TGTGCTGCCCCAGGAGGCTCGTCCCTACCACATTTCCGCATATCTCATGG
AAGGGGTAGTCGTCGAAGAATTTAGCCACTACAGCCTCGCCCTCCGTCAC
CACCTCAGCATCGGCCTCTATGAACTCCATGACAATGATGAACTGCTTGT
TATCCACGCTCTTGCCAATGTCGAGAGTGCGAACGTAGAAGGGACCACCG
CCGCCCTGATAGAGAAGGTTGTACAGATTAATGGGCTCATCGAGGTCAAT
GGCCGGAGATCGAAATGTTGGAGGCCGGCGGTGCGTCGGAGCTGCTCTAC
TCCAAAGGCTACTTGTCCGAAATCGCCGATTTTGATGACGAAGGAGGAGA
GGATGCCATTCTTAAACAAGTCCTTGGGCTCAGGGAGGACTTTGACCATG
ATGTTGTCGTAGATGGGGAGGGAAGTCAAACTCGCACTGAACTTGGACAT
GCTGCCACTACTGTCGTTGCTCCCCGAGTTTGACTCCTCCATTGCAACCC
TGTCCCCCCTTCGAAATGCGTGCAAGAGTTTTTGCATTCGGACCTCATTT
TTTGTAGACCACGCCCTCCTTCAATTCCTCCCATACGGCATCCTTTCCTC
GAAGCTTCCGGTGGAGCTTGCTATTCTCCGCGCGGCTGCTTATGTGCTGC
CCCAGGAGGCTCGTCCCTACCACATTTCCGCATATCTCATGGAAGGGGTA
GTCGTCGAAGAATTTAGCCACTACAGCCTCGCCCTCCGTCACCACCTCAG
CATCGGCCTCTATGAACTCCATGACAATGATGAACTGCTTGTTATCCACG
CTCTTGCCAATGTCGAGAGTGCGAACGTAGAAGGGACCACCGCCGCCCTG
ATAGAGAAGGTTGTACAGATTAATGGGCTCATCGAGGTCAATGGCCGGAG
ATCGAAATGTTGGAGGCCGGCGGTGCGTCGGAGCTGCTCTACTCCAAAGG
CTACTTGTCCGAAATCGCCGATTTTGATGACGAAGGAGGAGAGGATGCCA
TTCTTAAACAAGTCCTTGGGCTCAGGGAGGACTTTGACCATGATGTTGTC
GTAGATGGGGAGGGAAGTCAAACTCGCA back to top
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