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Properties
| Property Name | Value |
|---|
| TranscriptId | 303913 |
| Track | FilteredModels2 |
| ProteinId | 303827 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_41 | supercontig | scaffold_41:3255..5065 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9894 ID=mRNA_9894|Name=jgi.p|Nanoce1779_2|303827|organism=Nannochloropsis oceanica|type=mRNA|length=1298bp
AAAATAGGGTGTGACTGTGTACATTCGACTCTCCCAAAAAAAACTTAAAG
TTCTTTTATAGTTTTTAATGGGGTTTAAGCCCTTATTCGCCACAAATCGG
GGGTTTAGATCGTAGTGTATCTAGTGTTTCGTGGAGAACAACGTTGGACG
GAGACAGCTGACGGACAGGTCGGTTAACTGATCTCACACGCTTAGTGCGA
CCAACAGAGCGTTGTCATATGCAACCATGGCCATGACGCACCCCTTCAAT
ATTTTGATTAACCATACCGACTTGATTACAACTCAGCAGAGGTCTTTTGT
ATGTCCGCTGGACTTCTTCTTCCCCCACAATACAGCCAGACGATCATCAC
AGCCTGCCTGCATGGCATCAGGACCACCACCACTGCCCGCTGCCCCCTCC
CTCGACGCTCTCTCCCTTCACGACAGCAACGACAGCACCCCACGAGACCG
TTCATCTCTTACTCCGACCCATTTTGCGGACGCTTGGGACGTTTGCCTGG
AAGCGCACCTCCTCTCCTCCCTCCTCCTTCCCTCAGACCTGGCTGCCCTC
GCCGCCACCAACAAAGCGTTCGAGTCGTTTCGCTTCCAGCACTGGCAGAC
ACAAGACAAGACGATAGCGGAAGGAGAGTGGCGCGCGTGGTGGGTGTGTC
TGGCGAGTCAGCGTTTGAGTCCGTATTTGACGACGAAGGAGTTGTGTTTG
TCCTTGGCGGTGACCGCCAAGCCCTTTCGACCCTTTGGACGTCAACCTTG
GCGCCTCCGTCCTCGCAGCTGGTCCCCACTATTGCTACAGCGCATGGCCA
AGGGAAAGCTGCAAGAAGTCACATGGTTTGAGCTACCAGGCACTTTCCAA
GGGCATACCGATTCGCGCAAGCACATCGCCTTCCTCCACTCCCTCGTTCC
GGCCTTCACCCGCCTCCCCCTCCTGACCCACCTCCACGTCTGTGGCCTTC
GTGTCTCCCTCCTCGCCAAAATTCTGGACGAGGCCCTCCCCCTCGCCCTC
CTTCCTTCCTTCCCTCCCTCTTCCTCTCAAAAACTCAAGAAAGCAAAAGG
AGGAGGAGGAAAGGCTCGTCTGCTCGTGTTGGACGCCGGCACACACGCCT
CGCGGCAGGCGACTGTCTACCCTACCACTTTGTTCCACAACTTGACTTCC
TTGCACACGCTGCGGCTGTCGGGTCGCTATCAAGTCCTTCCTTGCCTTGC
GCAAGCAATCAAAGGCAGGCATCTGCCGCGGTAGGGATGAGTGTATAGCG
GAAGGGAGGGAGGAAGGGGGGGGTCGGAGGGGGGAGGGTGTTGCGAGC back to topprotein sequence of jgi.p|Nanoce1779_2|303827 >mRNA_9894-protein ID=mRNA_9894-protein|Name=jgi.p|Nanoce1779_2|303827|organism=Nannochloropsis oceanica|type=polypeptide|length=336bp
MAMTHPFNILINHTDLITTQQRSFVCPLDFFFPHNTARRSSQPACMASGP
PPLPAAPSLDALSLHDSNDSTPRDRSSLTPTHFADAWDVCLEAHLLSSLL
LPSDLAALAATNKAFESFRFQHWQTQDKTIAEGEWRAWWVCLASQRLSPY
LTTKELCLSLAVTAKPFRPFGRQPWRLRPRSWSPLLLQRMAKGKLQEVTW
FELPGTFQGHTDSRKHIAFLHSLVPAFTRLPLLTHLHVCGLRVSLLAKIL
DEALPLALLPSFPPSSSQKLKKAKGGGGKARLLVLDAGTHASRQATVYPT
TLFHNLTSLHTLRLSGRYQVLPCLAQAIKGRHLPR* back to topmRNA from alignment at scaffold_41:3255..5065- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9894 ID=mRNA_9894|Name=jgi.p|Nanoce1779_2|303827|organism=Nannochloropsis oceanica|type=mRNA|length=1811bp|location=Sequence derived from alignment at scaffold_41:3255..5065- (Nannochloropsis oceanica)
AAAATAGGGTGTGACTGTGTACATTCGACTCTCCCAAAAAAAACTTAAAG
TTCTTTTATAGTTTTTAATGGGGTTTAAGCCCTTATTCGCCACAAATCGG
GGGTTTAGATCGTAGTGTATCTAGTGTTTCGTGGAGAACAACGTTGGACG
GAGACAGCTGACGGACAGGTCGGTTAACTGATCTCACACGCTTAGTGCGA
CCAACAGAGCGTTGTCATATGCAACCATGGCCATGACGCACCCCTTCAAT
ATTTTGATTAACCATACCGACTTGATTACAACTCAGCAGAGGTCTTTTGT
ATGTCCGCTGGACTTCTTCTTCCCCCACAATACAGCCAGACGATCATCAC
AGCCTGCCTGCATGGCATCAGGACCACCACCACTGCCCGCTGCCCCCTCC
CTCGACGCTCTCTCCCTTCACGACAGCAACGACAGCACCCCACGAGACCG
TTCATCTCTTACTCCGACCCATTTTGCGGACGCTTGGGACGTTTGCCTGG
AAGCGCACCTCCTCTCCTCCCTCCTCCTTCCCTCAGACCTGGCTGCCCTC
GCCGCCACCAACAAAGCGTTCGAGTCGTTTCGCTTCCAGCACTGGCAGAC
ACAAGACAAGACGATAGCGGAAGGAGAGTGGCGCGCGTGGTGGGTGTGTC
TGGCGAGTCAGCGTTTGAGTCCGTATTTGACGACGAAGGAGTTGTGTTTG
TCCTTGGCGGTGACCGCCAAGCCCTTTCGACCCTTTGGACGTCAACCTGT
AAGAAGGCGGAGGGACGGAGGAAGGGAAGGAAAAGGAGGGGAGGGAGGGA
GGATGGATGGCCCAGGGAGGAGAGGTGTCAAGAAGACAGAGGAGGTCTGT
GCGCGTGAACTGGAACTCAGGGCTCCTTGCTGATTGTCCTCCCTCTTTCC
CCTCGTCATACGAACACACCCAACAGTGGCGCCTCCGTCCTCGCAGCTGG
TCCCCACTATTGCTACAGGCACGTTTCTCTTGGAACTTGTATCCTTGTGG
CACACTCTCTCCTCTTTTCGTCCCTCCGTCCGTCCGTCCGTTCCTAGCTT
ATGTCCACAGCCCAATCCACTCGCCCCTGACTCCATCGTCTCCCCCTCCC
TCCCTCCCTCCCTCCCTCTCTTTTTCCCTCACAGCGCATGGCCAAGGGAA
AGCTGCAAGAAGTCACATGGTTTGAGCTACCAGGCACTTTCCAAGGTAGG
GATGGGCGAAGGAGGGAGGAATGGAGGGAGGAAGAAGGGAGGGAGGGAAG
AAGTGGGAGCGACGGACGGGATCATAACGGACGAGGAGTTGAAAAGGACA
CGCGTCTTACAGTGATCCCCCCTCCCTCCCTCCCTGCTTTCCTTCCTCCC
ACCCTCATTTTCAGGGCATACCGATTCGCGCAAGCACATCGCCTTCCTCC
ACTCCCTCGTTCCGGCCTTCACCCGCCTCCCCCTCCTGACCCACCTCCAC
GTCTGTGGCCTTCGTGTCTCCCTCCTCGCCAAAATTCTGGACGAGGCCCT
CCCCCTCGCCCTCCTTCCTTCCTTCCCTCCCTCTTCCTCTCAAAAACTCA
AGAAAGCAAAAGGAGGAGGAGGAAAGGCTCGTCTGCTCGTGTTGGACGCC
GGCACACACGCCTCGCGGCAGGCGACTGTCTACCCTACCACTTTGTTCCA
CAACTTGACTTCCTTGCACACGCTGCGGCTGTCGGGTCGCTATCAAGTCC
TTCCTTGCCTTGCGCAAGCAATCAAAGGCAGGCATCTGCCGCGGTAGGGA
TGAGTGTATAGCGGAAGGGAGGGAGGAAGGGGGGGGTCGGAGGGGGGAGG
GTGTTGCGAGC back to topCoding sequence (CDS) from alignment at scaffold_41:3255..5065- >mRNA_9894 ID=mRNA_9894|Name=jgi.p|Nanoce1779_2|303827|organism=Nannochloropsis oceanica|type=CDS|length=4032bp|location=Sequence derived from alignment at scaffold_41:3255..5065- (Nannochloropsis oceanica)
GGCATACCGATTCGCGCAAGCACATCGCCTTCCTCCACTCCCTCGTTCCG
GCCTTCACCCGCCTCCCCCTCCTGACCCACCTCCACGTCTGTGGCCTTCG
TGTCTCCCTCCTCGCCAAAATTCTGGACGAGGCCCTCCCCCTCGCCCTCC
TTCCTTCCTTCCCTCCCTCTTCCTCTCAAAAACTCAAGAAAGCAAAAGGA
GGAGGAGGAAAGGCTCGTCTGCTCGTGTTGGACGCCGGCACACACGCCTC
GCGGCAGGCGACTGTCTACCCTACCACTTTGTTCCACAACTTGACTTCCT
TGCACACGCTGCGGCTGTCGGGTCGCTATCAAGTCCTTCCTTGCCTTGCG
CAAGCAATCAAAGGCAGGCATCTGCCGCGGTAGCGCATGGCCAAGGGAAA
GCTGCAAGAAGTCACATGGTTTGAGCTACCAGGCACTTTCCAAGTGGCGC
CTCCGTCCTCGCAGCTGGTCCCCACTATTGCTACAGATGGCCATGACGCA
CCCCTTCAATATTTTGATTAACCATACCGACTTGATTACAACTCAGCAGA
GGTCTTTTGTATGTCCGCTGGACTTCTTCTTCCCCCACAATACAGCCAGA
CGATCATCACAGCCTGCCTGCATGGCATCAGGACCACCACCACTGCCCGC
TGCCCCCTCCCTCGACGCTCTCTCCCTTCACGACAGCAACGACAGCACCC
CACGAGACCGTTCATCTCTTACTCCGACCCATTTTGCGGACGCTTGGGAC
GTTTGCCTGGAAGCGCACCTCCTCTCCTCCCTCCTCCTTCCCTCAGACCT
GGCTGCCCTCGCCGCCACCAACAAAGCGTTCGAGTCGTTTCGCTTCCAGC
ACTGGCAGACACAAGACAAGACGATAGCGGAAGGAGAGTGGCGCGCGTGG
TGGGTGTGTCTGGCGAGTCAGCGTTTGAGTCCGTATTTGACGACGAAGGA
GTTGTGTTTGTCCTTGGCGGTGACCGCCAAGCCCTTTCGACCCTTTGGAC
GTCAACCTGGCATACCGATTCGCGCAAGCACATCGCCTTCCTCCACTCCC
TCGTTCCGGCCTTCACCCGCCTCCCCCTCCTGACCCACCTCCACGTCTGT
GGCCTTCGTGTCTCCCTCCTCGCCAAAATTCTGGACGAGGCCCTCCCCCT
CGCCCTCCTTCCTTCCTTCCCTCCCTCTTCCTCTCAAAAACTCAAGAAAG
CAAAAGGAGGAGGAGGAAAGGCTCGTCTGCTCGTGTTGGACGCCGGCACA
CACGCCTCGCGGCAGGCGACTGTCTACCCTACCACTTTGTTCCACAACTT
GACTTCCTTGCACACGCTGCGGCTGTCGGGTCGCTATCAAGTCCTTCCTT
GCCTTGCGCAAGCAATCAAAGGCAGGCATCTGCCGCGGTAGCGCATGGCC
AAGGGAAAGCTGCAAGAAGTCACATGGTTTGAGCTACCAGGCACTTTCCA
AGTGGCGCCTCCGTCCTCGCAGCTGGTCCCCACTATTGCTACAGATGGCC
ATGACGCACCCCTTCAATATTTTGATTAACCATACCGACTTGATTACAAC
TCAGCAGAGGTCTTTTGTATGTCCGCTGGACTTCTTCTTCCCCCACAATA
CAGCCAGACGATCATCACAGCCTGCCTGCATGGCATCAGGACCACCACCA
CTGCCCGCTGCCCCCTCCCTCGACGCTCTCTCCCTTCACGACAGCAACGA
CAGCACCCCACGAGACCGTTCATCTCTTACTCCGACCCATTTTGCGGACG
CTTGGGACGTTTGCCTGGAAGCGCACCTCCTCTCCTCCCTCCTCCTTCCC
TCAGACCTGGCTGCCCTCGCCGCCACCAACAAAGCGTTCGAGTCGTTTCG
CTTCCAGCACTGGCAGACACAAGACAAGACGATAGCGGAAGGAGAGTGGC
GCGCGTGGTGGGTGTGTCTGGCGAGTCAGCGTTTGAGTCCGTATTTGACG
ACGAAGGAGTTGTGTTTGTCCTTGGCGGTGACCGCCAAGCCCTTTCGACC
CTTTGGACGTCAACCTGGCATACCGATTCGCGCAAGCACATCGCCTTCCT
CCACTCCCTCGTTCCGGCCTTCACCCGCCTCCCCCTCCTGACCCACCTCC
ACGTCTGTGGCCTTCGTGTCTCCCTCCTCGCCAAAATTCTGGACGAGGCC
CTCCCCCTCGCCCTCCTTCCTTCCTTCCCTCCCTCTTCCTCTCAAAAACT
CAAGAAAGCAAAAGGAGGAGGAGGAAAGGCTCGTCTGCTCGTGTTGGACG
CCGGCACACACGCCTCGCGGCAGGCGACTGTCTACCCTACCACTTTGTTC
CACAACTTGACTTCCTTGCACACGCTGCGGCTGTCGGGTCGCTATCAAGT
CCTTCCTTGCCTTGCGCAAGCAATCAAAGGCAGGCATCTGCCGCGGTAGC
GCATGGCCAAGGGAAAGCTGCAAGAAGTCACATGGTTTGAGCTACCAGGC
ACTTTCCAAGTGGCGCCTCCGTCCTCGCAGCTGGTCCCCACTATTGCTAC
AGATGGCCATGACGCACCCCTTCAATATTTTGATTAACCATACCGACTTG
ATTACAACTCAGCAGAGGTCTTTTGTATGTCCGCTGGACTTCTTCTTCCC
CCACAATACAGCCAGACGATCATCACAGCCTGCCTGCATGGCATCAGGAC
CACCACCACTGCCCGCTGCCCCCTCCCTCGACGCTCTCTCCCTTCACGAC
AGCAACGACAGCACCCCACGAGACCGTTCATCTCTTACTCCGACCCATTT
TGCGGACGCTTGGGACGTTTGCCTGGAAGCGCACCTCCTCTCCTCCCTCC
TCCTTCCCTCAGACCTGGCTGCCCTCGCCGCCACCAACAAAGCGTTCGAG
TCGTTTCGCTTCCAGCACTGGCAGACACAAGACAAGACGATAGCGGAAGG
AGAGTGGCGCGCGTGGTGGGTGTGTCTGGCGAGTCAGCGTTTGAGTCCGT
ATTTGACGACGAAGGAGTTGTGTTTGTCCTTGGCGGTGACCGCCAAGCCC
TTTCGACCCTTTGGACGTCAACCTGGCATACCGATTCGCGCAAGCACATC
GCCTTCCTCCACTCCCTCGTTCCGGCCTTCACCCGCCTCCCCCTCCTGAC
CCACCTCCACGTCTGTGGCCTTCGTGTCTCCCTCCTCGCCAAAATTCTGG
ACGAGGCCCTCCCCCTCGCCCTCCTTCCTTCCTTCCCTCCCTCTTCCTCT
CAAAAACTCAAGAAAGCAAAAGGAGGAGGAGGAAAGGCTCGTCTGCTCGT
GTTGGACGCCGGCACACACGCCTCGCGGCAGGCGACTGTCTACCCTACCA
CTTTGTTCCACAACTTGACTTCCTTGCACACGCTGCGGCTGTCGGGTCGC
TATCAAGTCCTTCCTTGCCTTGCGCAAGCAATCAAAGGCAGGCATCTGCC
GCGGTAGCGCATGGCCAAGGGAAAGCTGCAAGAAGTCACATGGTTTGAGC
TACCAGGCACTTTCCAAGTGGCGCCTCCGTCCTCGCAGCTGGTCCCCACT
ATTGCTACAGATGGCCATGACGCACCCCTTCAATATTTTGATTAACCATA
CCGACTTGATTACAACTCAGCAGAGGTCTTTTGTATGTCCGCTGGACTTC
TTCTTCCCCCACAATACAGCCAGACGATCATCACAGCCTGCCTGCATGGC
ATCAGGACCACCACCACTGCCCGCTGCCCCCTCCCTCGACGCTCTCTCCC
TTCACGACAGCAACGACAGCACCCCACGAGACCGTTCATCTCTTACTCCG
ACCCATTTTGCGGACGCTTGGGACGTTTGCCTGGAAGCGCACCTCCTCTC
CTCCCTCCTCCTTCCCTCAGACCTGGCTGCCCTCGCCGCCACCAACAAAG
CGTTCGAGTCGTTTCGCTTCCAGCACTGGCAGACACAAGACAAGACGATA
GCGGAAGGAGAGTGGCGCGCGTGGTGGGTGTGTCTGGCGAGTCAGCGTTT
GAGTCCGTATTTGACGACGAAGGAGTTGTGTTTGTCCTTGGCGGTGACCG
CCAAGCCCTTTCGACCCTTTGGACGTCAACCT back to top
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