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Properties
Property Name | Value |
TranscriptId | 633941 |
Track | FilteredModels2 |
ProteinId | 633855 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_45 | supercontig | scaffold_45:144505..146798 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9884 ID=mRNA_9884|Name=jgi.p|Nanoce1779_2|633855|organism=Nannochloropsis oceanica|type=mRNA|length=815bp ATGCTGACGGAGGCGCAGCATTGCGTTGGTCGTCAGACTCCGGCCTCTGT CCTCGGCCCGGGTAAGGCGGTCGTGTCCTTTGACACCTACAAGGTCGCCG AGTCTCTGCAAGAAGCCGGTTTTAGCAAAGGCCAAGCTGAAGCGATCCTA CGGGTAGTCGTCGCGGGAATGGAGGAGTCCACGCTGAAAAGCACAGCAAT GATTGCCACTCGCCGGGACCTGCTCGACCTCAAGACCGAGTTGAGCGAGA AACTATTCAGCAGCACCATGCGTTTTGACGTTGCTCAACGGCACAGCAAG GAAGTGATCGAAAAAGATCTTATGTCCGTGCGGTCCGAATTTAAGGCATC CATCCATGCCGAGTATCAGAAGCTTGAGAAAGAAATGTCAAATGTGGAAA AGGTCCTGACCGACCGGCATTTGACGCGGAGGGAACTCATGGAACAGCGA GTATCCGTGCTGCAGAACGAGATTGCCCAGGTGGAGAAGCGAGTCGTCCA ATATGGTGCGGGGACGCTTCTGTCCCTCTTGACGGTAGGCTTGGGGTTTG CCCGCTTGATGATGTGAGGAGGGAGGGAGGGAAGAGGCGAGGAGAAGTGT AAATGAAATAAGGGTAAGATATTTGCGGGGCTGAGTGCTTCTTATTACCA GCGTGTTGCGAGCTGCATGCTCCAGCATAGGGAAAGAGGGCAAAGACAGA TGCAAAAGGCGAAACGTGTAAAGAGATGAGGTTGTCGAATGAAGGTGTCC ATCGATGGTATTGTAATGGTCATTGTCAAACCTGAAAGATTTAAATAATA ACCCAGTAAATTATG back to topprotein sequence of jgi.p|Nanoce1779_2|633855 >mRNA_9884-protein ID=mRNA_9884-protein|Name=jgi.p|Nanoce1779_2|633855|organism=Nannochloropsis oceanica|type=polypeptide|length=189bp MLTEAQHCVGRQTPASVLGPGKAVVSFDTYKVAESLQEAGFSKGQAEAIL RVVVAGMEESTLKSTAMIATRRDLLDLKTELSEKLFSSTMRFDVAQRHSK EVIEKDLMSVRSEFKASIHAEYQKLEKEMSNVEKVLTDRHLTRRELMEQR VSVLQNEIAQVEKRVVQYGAGTLLSLLTVGLGFARLMM* back to topmRNA from alignment at scaffold_45:144505..146798- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9884 ID=mRNA_9884|Name=jgi.p|Nanoce1779_2|633855|organism=Nannochloropsis oceanica|type=mRNA|length=2294bp|location=Sequence derived from alignment at scaffold_45:144505..146798- (Nannochloropsis oceanica) ATGCTGACGGAGGCGCAGCATTGCGTTGGTCGTCAGGTGTGTCTGTGATT
CGCTAATATAACGGTAGAAAACAGGGAGGTGGCTGAAGAGGATGAGGACG
AGGGAGGGAGGTCAGGGAGGTCGAAGAGGCAAAAGTGTGTTTGGCTGGCT
TGTTGAGGGCGGAGTAGCACTTTTCTTGCATGCACACATCCCCTTCAGAT
GTGAACGCTTGTCTCTCCCCTGGGGTTGTGTCGTCTGTGGAGACTGTCTG
TGTGTACTCAGAAGGGGTCAGGGTGCTTACTCTCGCCCAACTTCCTTGAA
CGCCGCAACGGACCAACAAGCCCATGTGTCCCATCCAGCCTACAAGGACC
TCAGACACAGCTGTTGAGGCGAATATTCGATAATCGACTGCAGCAGGATG
CACAACATGCACAGGAGTAGCCGCCTCAGGAGCTGCAGGCCTTGCAGTTG
TAGCTGAGACCAATCCGACTCATGCCCTCCCTCACCCCATCTCACACCCC
AGTGTTGTACAACTCCTACCTCCCTCTCGGAGACGTCCCACCACCCTTCG
TATACCCTGATTCCACCTGGATACACGGCCCGATTCAGGCAAAATGCTTA
TCTCCGGCCGCCGGTTGCTTCAGTCGACTGCTTGCCGTCAATGCCGCCTC
GTTTCCTCCTCCTCCCCCACGCCTACCTCTACACCTCCTTCCTCTACGCC
CTCCTCGTCTGGCGTTGCCCCCCCGCTCTTCTCCACCCCCTTCGCCTCTT
CTTCCTCATCGAGCCCCTCCTTATCAACTGTGCAGACTCCGGCCTCTGTC
CTCGGCCCGGGTAAGGCGGTCGTGTCCTTTGACACCTACAAGGTGAGGAA
GAGACGATACATGCCTTTATCATCTTCATACCTTCCCCTTCCCTACCTTT
CCACCTTACTTCCTACATTCTGCCTTGACAGTCTTGAGCGATACGAATGC
TTGCTTCTTTAATGCCTTATCCTCCCTAATTGTATTCGATCTTGTCTCCT
GTCCTCCCTCCTCTCATGCGCCGCCCTAGGTCGCCGAGTCTCTGCAAGAA
GCCGGTTTTAGCAAAGGCCAAGCTGAAGCGATCCTACGGGTAGTCGTCGC
GGGAATGGAGGAGTCCACGCTGAAAAGCACAGCAATGGTACGTAGGGGTG
AACGAGGAAAGGATTTACAGGGCAGGAGCGAGGGAGAGGAAACGGTCTCA
AGTCGGCTTTAAATGAAGAGCCACAACCTCCATGGCACTGTGCACAGCCG
ACCCTAAGTCGACCAGGCGATTGTGACACTCAAAACCTTGACATCTAAAT
CCATCACACATGATTTTGAATGCGTAGATTGCCACTCGCCGGGACCTGCT
CGACCTCAAGACCGAGTTGAGCGAGAAACTATTCAGCAGCACCATGCGTT
TTGACGTTGCTCAACGGCACAGCAAGGAAGTGATCGAAAAAGATCTTATG
TCCGTGCGGTACGAAGAGCAGCAAGAGCAAGGGAGAGAGAGGAGGAAAAT
GGCATTGAGAAGAAGGGTCGCCTGCGTGCATTTACACGGACTTTGTTGGT
TGAAAGAGAATAAGGACTCGGATATACATATCGTAACTTGTTCAAGAGGA
CTCCACCAATGACGTGCCTCCCTCCTTTTTTCCCACTCTCCCTCCACACC
TCCCTGCTCAGGTCCGAATTTAAGGCATCCATCCATGCCGAGTATCAGAA
GCTTGAGAAAGAAATGTCAAATGTGGAAAAGGTCCTGACCGACCGGCATT
TGACGCGGAGGGAACTCATGGAACAGCGAGTATCCGTGCTGCAGGTCCGG
AGGAAGGCGGGGAAAAGGGATGGAGGAAAGGGAGGCCTTCAATTCTACAC
CATTGATCTATGGCTCATGTTTGCATGATATTATGCGTCACTCAAATGCT
CTTCATCCCTCTTTCCATCCCTTCCTACTCCCCCTCTCGCACAGAACGAG
ATTGCCCAGGTGGAGAAGCGAGTCGTCCAATATGGTGCGGGGACGCTTCT
GTCCCTCTTGACGGTAGGCTTGGGGTTTGCCCGCTTGATGATGTGAGGAG
GGAGGGAGGGAAGAGGCGAGGAGAAGTGTAAATGAAATAAGGGTAAGATA
TTTGCGGGGCTGAGTGCTTCTTATTACCAGCGTGTTGCGAGCTGCATGCT
CCAGCATAGGGAAAGAGGGCAAAGACAGATGCAAAAGGCGAAACGTGTAA
AGAGATGAGGTTGTCGAATGAAGGTGTCCATCGATGGTATTGTAATGGTC
ATTGTCAAACCTGAAAGATTTAAATAATAACCCAGTAAATTATG back to topCoding sequence (CDS) from alignment at scaffold_45:144505..146798- >mRNA_9884 ID=mRNA_9884|Name=jgi.p|Nanoce1779_2|633855|organism=Nannochloropsis oceanica|type=CDS|length=3402bp|location=Sequence derived from alignment at scaffold_45:144505..146798- (Nannochloropsis oceanica) AACGAGATTGCCCAGGTGGAGAAGCGAGTCGTCCAATATGGTGCGGGGAC GCTTCTGTCCCTCTTGACGGTAGGCTTGGGGTTTGCCCGCTTGATGATGT GAGTCCGAATTTAAGGCATCCATCCATGCCGAGTATCAGAAGCTTGAGAA AGAAATGTCAAATGTGGAAAAGGTCCTGACCGACCGGCATTTGACGCGGA GGGAACTCATGGAACAGCGAGTATCCGTGCTGCAGATTGCCACTCGCCGG GACCTGCTCGACCTCAAGACCGAGTTGAGCGAGAAACTATTCAGCAGCAC CATGCGTTTTGACGTTGCTCAACGGCACAGCAAGGAAGTGATCGAAAAAG ATCTTATGTCCGTGCGGTCGCCGAGTCTCTGCAAGAAGCCGGTTTTAGCA AAGGCCAAGCTGAAGCGATCCTACGGGTAGTCGTCGCGGGAATGGAGGAG TCCACGCTGAAAAGCACAGCAATGACTCCGGCCTCTGTCCTCGGCCCGGG TAAGGCGGTCGTGTCCTTTGACACCTACAAGATGCTGACGGAGGCGCAGC ATTGCGTTGGTCGTCAGAACGAGATTGCCCAGGTGGAGAAGCGAGTCGTC CAATATGGTGCGGGGACGCTTCTGTCCCTCTTGACGGTAGGCTTGGGGTT TGCCCGCTTGATGATGTGAGTCCGAATTTAAGGCATCCATCCATGCCGAG TATCAGAAGCTTGAGAAAGAAATGTCAAATGTGGAAAAGGTCCTGACCGA CCGGCATTTGACGCGGAGGGAACTCATGGAACAGCGAGTATCCGTGCTGC AGATTGCCACTCGCCGGGACCTGCTCGACCTCAAGACCGAGTTGAGCGAG AAACTATTCAGCAGCACCATGCGTTTTGACGTTGCTCAACGGCACAGCAA GGAAGTGATCGAAAAAGATCTTATGTCCGTGCGGTCGCCGAGTCTCTGCA AGAAGCCGGTTTTAGCAAAGGCCAAGCTGAAGCGATCCTACGGGTAGTCG TCGCGGGAATGGAGGAGTCCACGCTGAAAAGCACAGCAATGACTCCGGCC TCTGTCCTCGGCCCGGGTAAGGCGGTCGTGTCCTTTGACACCTACAAGAT GCTGACGGAGGCGCAGCATTGCGTTGGTCGTCAGAACGAGATTGCCCAGG TGGAGAAGCGAGTCGTCCAATATGGTGCGGGGACGCTTCTGTCCCTCTTG ACGGTAGGCTTGGGGTTTGCCCGCTTGATGATGTGAGTCCGAATTTAAGG CATCCATCCATGCCGAGTATCAGAAGCTTGAGAAAGAAATGTCAAATGTG GAAAAGGTCCTGACCGACCGGCATTTGACGCGGAGGGAACTCATGGAACA GCGAGTATCCGTGCTGCAGATTGCCACTCGCCGGGACCTGCTCGACCTCA AGACCGAGTTGAGCGAGAAACTATTCAGCAGCACCATGCGTTTTGACGTT GCTCAACGGCACAGCAAGGAAGTGATCGAAAAAGATCTTATGTCCGTGCG GTCGCCGAGTCTCTGCAAGAAGCCGGTTTTAGCAAAGGCCAAGCTGAAGC GATCCTACGGGTAGTCGTCGCGGGAATGGAGGAGTCCACGCTGAAAAGCA CAGCAATGACTCCGGCCTCTGTCCTCGGCCCGGGTAAGGCGGTCGTGTCC TTTGACACCTACAAGATGCTGACGGAGGCGCAGCATTGCGTTGGTCGTCA GAACGAGATTGCCCAGGTGGAGAAGCGAGTCGTCCAATATGGTGCGGGGA CGCTTCTGTCCCTCTTGACGGTAGGCTTGGGGTTTGCCCGCTTGATGATG TGAGTCCGAATTTAAGGCATCCATCCATGCCGAGTATCAGAAGCTTGAGA AAGAAATGTCAAATGTGGAAAAGGTCCTGACCGACCGGCATTTGACGCGG AGGGAACTCATGGAACAGCGAGTATCCGTGCTGCAGATTGCCACTCGCCG GGACCTGCTCGACCTCAAGACCGAGTTGAGCGAGAAACTATTCAGCAGCA CCATGCGTTTTGACGTTGCTCAACGGCACAGCAAGGAAGTGATCGAAAAA GATCTTATGTCCGTGCGGTCGCCGAGTCTCTGCAAGAAGCCGGTTTTAGC AAAGGCCAAGCTGAAGCGATCCTACGGGTAGTCGTCGCGGGAATGGAGGA GTCCACGCTGAAAAGCACAGCAATGACTCCGGCCTCTGTCCTCGGCCCGG GTAAGGCGGTCGTGTCCTTTGACACCTACAAGATGCTGACGGAGGCGCAG CATTGCGTTGGTCGTCAGAACGAGATTGCCCAGGTGGAGAAGCGAGTCGT CCAATATGGTGCGGGGACGCTTCTGTCCCTCTTGACGGTAGGCTTGGGGT TTGCCCGCTTGATGATGTGAGTCCGAATTTAAGGCATCCATCCATGCCGA GTATCAGAAGCTTGAGAAAGAAATGTCAAATGTGGAAAAGGTCCTGACCG ACCGGCATTTGACGCGGAGGGAACTCATGGAACAGCGAGTATCCGTGCTG CAGATTGCCACTCGCCGGGACCTGCTCGACCTCAAGACCGAGTTGAGCGA GAAACTATTCAGCAGCACCATGCGTTTTGACGTTGCTCAACGGCACAGCA AGGAAGTGATCGAAAAAGATCTTATGTCCGTGCGGTCGCCGAGTCTCTGC AAGAAGCCGGTTTTAGCAAAGGCCAAGCTGAAGCGATCCTACGGGTAGTC GTCGCGGGAATGGAGGAGTCCACGCTGAAAAGCACAGCAATGACTCCGGC CTCTGTCCTCGGCCCGGGTAAGGCGGTCGTGTCCTTTGACACCTACAAGA TGCTGACGGAGGCGCAGCATTGCGTTGGTCGTCAGAACGAGATTGCCCAG GTGGAGAAGCGAGTCGTCCAATATGGTGCGGGGACGCTTCTGTCCCTCTT GACGGTAGGCTTGGGGTTTGCCCGCTTGATGATGTGAGTCCGAATTTAAG GCATCCATCCATGCCGAGTATCAGAAGCTTGAGAAAGAAATGTCAAATGT GGAAAAGGTCCTGACCGACCGGCATTTGACGCGGAGGGAACTCATGGAAC AGCGAGTATCCGTGCTGCAGATTGCCACTCGCCGGGACCTGCTCGACCTC AAGACCGAGTTGAGCGAGAAACTATTCAGCAGCACCATGCGTTTTGACGT TGCTCAACGGCACAGCAAGGAAGTGATCGAAAAAGATCTTATGTCCGTGC GGTCGCCGAGTCTCTGCAAGAAGCCGGTTTTAGCAAAGGCCAAGCTGAAG CGATCCTACGGGTAGTCGTCGCGGGAATGGAGGAGTCCACGCTGAAAAGC ACAGCAATGACTCCGGCCTCTGTCCTCGGCCCGGGTAAGGCGGTCGTGTC CTTTGACACCTACAAGATGCTGACGGAGGCGCAGCATTGCGTTGGTCGTC AG back to top
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