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Properties
| Property Name | Value |
|---|
| TranscriptId | 148291 |
| Track | FilteredModels2 |
| ProteinId | 148205 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:945155..946680 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_988 ID=mRNA_988|Name=jgi.p|Nanoce1779_2|148205|organism=Nannochloropsis oceanica|type=mRNA|length=1526bp
ACGACCTGCACCGTACAAATTACGAACGGCGAGGGGTCGTTGTGGGACGT
ACCCCTCTTCAATCACATTTTCCTGCCCTACCACAGGCCCAGTGCAGGCC
CGTATACCCTGTCAGTATCATAATCTCTACTTTCTCATTGGGTGCTCATG
TTTCTTTATAGCTTTTATCCCTAAAGACATTCAATTTTTGCTGCTGACCC
TTTCGAATCGAACATAACAGAGGTGAACCCTGCGTCCGTCTGTGCCCCTT
CCCTTTGGTCCTCTCTAGGGCCAGCTTTCCTCCCATTTCCTCCCCACTTC
TTTCTCCCCTCCATTTGCAAATGAATTTTAATGTCATACATACTTACAAA
ATCACGATTTACTTTTCCCATCTGAAAAAGAGTCAATCCGCCGTATCCCT
CACATACCGCGGCCTTTCCTTCCACCTGTTCCCTAGGCATTTTTTAGACC
TCCCTCTTTCCTCCCCCTCTCCGTCCCTTTCTCTTCCCCTTCTCCAGGCC
CTCATTCTTACTCGGACATGGTATCTAAGTAGCGCATCACCTCCCAAAAT
TGACCGTCATCCGTTCCATCCACCAACATCTGAACCACCCCCTTCTCCCT
CCCTCCCTCCATCCCTTTCCCCTTCCCTTCCTCCTCCTCCTCGGCCACCA
CGCTCATCATCCTCCCTCCTTCCCTTCGCCGACGCAAGCGAAGGACCATC
GCCCGCTGCATTGACCACTCTAACAACACCATTGCCGCCATTTTACTCAG
AGCTTGGTTCTTATTGCTCAGCGCAGAATCGGCCGTTCCTCCTCCTCCTC
CTCCTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTGCTTCT
GCTCCTGCTTCTGCTGCTGCTGCTGCTACTGCGAAGACGAGCGCGTGACC
ATCCCCACCCTTCTCGCGTGACCATCCCCACCCTTCTCGCATGCTTGTGC
ATGTGTGCTGAAAGAGCAAGCACTCTATCAATTCTCGTTTGCCTTGGTTG
TGGTCCGCCCCTGCGCGCAAGAGTAAGCGCACAACCACGGGTCACTGTCC
CTCCATCATCGCCACCAGCGACAGCGTGCTCCCGTCGCGCGCCGTGGAAT
CAATCTCCAAGAAATGAGGGGCTTGGGGGAGGAGGGGTGTGGTGAGAAGG
AAGAGGAGGCACGCTTCATGCCCTCCAGCGGCGGCGTGATGAAGCAAGGA
CCAGTGTCCGCGATCGCGACCACAGGGTTGAGCACCTTGAGAGAAGAAAT
AACTGGTGGGATTGAGGTAGATGGAAGATATCAGAGAGTGTCCAAATCAC
TGCACATATTTAAAATTATCGGTCTGATATCGCAGTAGACACAAATTTTG
ACCTCATCTCGCTCCCCTTAAGCCCACCACATGTACCGAAGCAGGTTGTA
AAGCCCCCGCCGCGCCGCGCATTGGACAGGCAAAATACCATTAAGCCGGG
AGTTACCAAGAGGGCGGGATTAAGTGTCCCAGGCTTTTGACCGCTCCCAA
ATTATTTTGGAGGGCGGCTTAGAGAA back to topprotein sequence of jgi.p|Nanoce1779_2|148205 >mRNA_988-protein ID=mRNA_988-protein|Name=jgi.p|Nanoce1779_2|148205|organism=Nannochloropsis oceanica|type=polypeptide|length=275bp
MNFNVIHTYKITIYFSHLKKSQSAVSLTYRGLSFHLFPRHFLDLPLSSPS
PSLSLPLLQALILTRTWYLSSASPPKIDRHPFHPPTSEPPPSPSLPPSLS
PSLPPPPRPPRSSSSLLPFADASEGPSPAALTTLTTPLPPFYSELGSYCS
AQNRPFLLLLLLLFLLLLLLLLFLLLLLLLLLLLLLLRRRARDHPHPSRV
TIPTLLACLCMCAERASTLSILVCLGCGPPLRARVSAQPRVTVPPSSPPA
TACSRRAPWNQSPRNEGLGGGGVW* back to topmRNA from alignment at scaffold_2:945155..946680+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_988 ID=mRNA_988|Name=jgi.p|Nanoce1779_2|148205|organism=Nannochloropsis oceanica|type=mRNA|length=1526bp|location=Sequence derived from alignment at scaffold_2:945155..946680+ (Nannochloropsis oceanica)
ACGACCTGCACCGTACAAATTACGAACGGCGAGGGGTCGTTGTGGGACGT
ACCCCTCTTCAATCACATTTTCCTGCCCTACCACAGGCCCAGTGCAGGCC
CGTATACCCTGTCAGTATCATAATCTCTACTTTCTCATTGGGTGCTCATG
TTTCTTTATAGCTTTTATCCCTAAAGACATTCAATTTTTGCTGCTGACCC
TTTCGAATCGAACATAACAGAGGTGAACCCTGCGTCCGTCTGTGCCCCTT
CCCTTTGGTCCTCTCTAGGGCCAGCTTTCCTCCCATTTCCTCCCCACTTC
TTTCTCCCCTCCATTTGCAAATGAATTTTAATGTCATACATACTTACAAA
ATCACGATTTACTTTTCCCATCTGAAAAAGAGTCAATCCGCCGTATCCCT
CACATACCGCGGCCTTTCCTTCCACCTGTTCCCTAGGCATTTTTTAGACC
TCCCTCTTTCCTCCCCCTCTCCGTCCCTTTCTCTTCCCCTTCTCCAGGCC
CTCATTCTTACTCGGACATGGTATCTAAGTAGCGCATCACCTCCCAAAAT
TGACCGTCATCCGTTCCATCCACCAACATCTGAACCACCCCCTTCTCCCT
CCCTCCCTCCATCCCTTTCCCCTTCCCTTCCTCCTCCTCCTCGGCCACCA
CGCTCATCATCCTCCCTCCTTCCCTTCGCCGACGCAAGCGAAGGACCATC
GCCCGCTGCATTGACCACTCTAACAACACCATTGCCGCCATTTTACTCAG
AGCTTGGTTCTTATTGCTCAGCGCAGAATCGGCCGTTCCTCCTCCTCCTC
CTCCTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTGCTTCT
GCTCCTGCTTCTGCTGCTGCTGCTGCTACTGCGAAGACGAGCGCGTGACC
ATCCCCACCCTTCTCGCGTGACCATCCCCACCCTTCTCGCATGCTTGTGC
ATGTGTGCTGAAAGAGCAAGCACTCTATCAATTCTCGTTTGCCTTGGTTG
TGGTCCGCCCCTGCGCGCAAGAGTAAGCGCACAACCACGGGTCACTGTCC
CTCCATCATCGCCACCAGCGACAGCGTGCTCCCGTCGCGCGCCGTGGAAT
CAATCTCCAAGAAATGAGGGGCTTGGGGGAGGAGGGGTGTGGTGAGAAGG
AAGAGGAGGCACGCTTCATGCCCTCCAGCGGCGGCGTGATGAAGCAAGGA
CCAGTGTCCGCGATCGCGACCACAGGGTTGAGCACCTTGAGAGAAGAAAT
AACTGGTGGGATTGAGGTAGATGGAAGATATCAGAGAGTGTCCAAATCAC
TGCACATATTTAAAATTATCGGTCTGATATCGCAGTAGACACAAATTTTG
ACCTCATCTCGCTCCCCTTAAGCCCACCACATGTACCGAAGCAGGTTGTA
AAGCCCCCGCCGCGCCGCGCATTGGACAGGCAAAATACCATTAAGCCGGG
AGTTACCAAGAGGGCGGGATTAAGTGTCCCAGGCTTTTGACCGCTCCCAA
ATTATTTTGGAGGGCGGCTTAGAGAA back to topCoding sequence (CDS) from alignment at scaffold_2:945155..946680+ >mRNA_988 ID=mRNA_988|Name=jgi.p|Nanoce1779_2|148205|organism=Nannochloropsis oceanica|type=CDS|length=825bp|location=Sequence derived from alignment at scaffold_2:945155..946680+ (Nannochloropsis oceanica)
ATGAATTTTAATGTCATACATACTTACAAAATCACGATTTACTTTTCCCA
TCTGAAAAAGAGTCAATCCGCCGTATCCCTCACATACCGCGGCCTTTCCT
TCCACCTGTTCCCTAGGCATTTTTTAGACCTCCCTCTTTCCTCCCCCTCT
CCGTCCCTTTCTCTTCCCCTTCTCCAGGCCCTCATTCTTACTCGGACATG
GTATCTAAGTAGCGCATCACCTCCCAAAATTGACCGTCATCCGTTCCATC
CACCAACATCTGAACCACCCCCTTCTCCCTCCCTCCCTCCATCCCTTTCC
CCTTCCCTTCCTCCTCCTCCTCGGCCACCACGCTCATCATCCTCCCTCCT
TCCCTTCGCCGACGCAAGCGAAGGACCATCGCCCGCTGCATTGACCACTC
TAACAACACCATTGCCGCCATTTTACTCAGAGCTTGGTTCTTATTGCTCA
GCGCAGAATCGGCCGTTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCT
CCTCCTCCTCCTCCTCTTCCTCCTGCTTCTGCTCCTGCTTCTGCTGCTGC
TGCTGCTACTGCGAAGACGAGCGCGTGACCATCCCCACCCTTCTCGCGTG
ACCATCCCCACCCTTCTCGCATGCTTGTGCATGTGTGCTGAAAGAGCAAG
CACTCTATCAATTCTCGTTTGCCTTGGTTGTGGTCCGCCCCTGCGCGCAA
GAGTAAGCGCACAACCACGGGTCACTGTCCCTCCATCATCGCCACCAGCG
ACAGCGTGCTCCCGTCGCGCGCCGTGGAATCAATCTCCAAGAAATGAGGG
GCTTGGGGGAGGAGGGGTGTGGTGA back to top
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