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Properties
| Property Name | Value |
|---|
| TranscriptId | 609517 |
| Track | FilteredModels2 |
| ProteinId | 609431 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_45 | supercontig | scaffold_45:100113..101423 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9870 ID=mRNA_9870|Name=jgi.p|Nanoce1779_2|609431|organism=Nannochloropsis oceanica|type=mRNA|length=1063bp
CAGCAGCAGCAGCAGCAGCAGCAGGAGAATAAGACCGGTAGACGAAAAAG
TCTTGGAGGGATGGGAGTGGCACCTGCGGCTGCTGACGGAGGAGGGACGG
AGGAGGGAGGGGGAGAACGGGGAGGAATTCCGGCGGATGCTAACGGCCAT
GTCCGTTTCTGGGCCCTTTTCCGTTACCATAGCAGCAGCACTTTCGAATG
GGAAGATGGTAGGGAGATAGAAGAGCAGGAGGACGAGGAGAAGGGGGAAG
ACCTCCCTTCCTCCACCGCGCCTGCTTCTTATCCCACTCGCCGATTCCCC
TATTATTTCCTCTTTCTCGAGACGTCCCTCCTCTTCTACTGTCTATATCT
CCTTCTCAAAGGAGGGAACAGCGACCTAACCTGCTACATCATCCCCGGCA
CCGACTCTCCCTTCTCTCCCTCTCTCGCTTTGTGGGCCCAAGCCACCTAC
GACCGACTCCTTCAAACTTCCTCCTCCTCTCGTCGCTCCGCCACGCAAAT
GTGCTTCGCCTACTGGCCCTGTCCCTTACCAACCACCAGTCACTCCAACC
CTCCCTTCCATGCGCCTTTCCTCCTTCGATACCGACAAGCAAAGGCGAGG
ACCCTCCTGGACGTTATCATGGAAACGGGCATCTTCGCCTCTACGGCTTA
TGCACTCACGCGGCTGTTGCAGAAAAGCTATTTTTTCATCGACATTGAGA
GGTATATGGATCCGGCGTTCGAGCCTCCATATAAAAATATCCATGAGCAC
AGGTGCCGTGTCATGACCAGGGGGATGGTGGAAGACTACATCTACCTGCG
ACGAGAGATGTTCATCGACGCGTGCGTCCAACGAGGAGTGGAGGGAAGAG
AGAGCGAGATGGGAGGGAGAGGAGGAAGGAGATAAAACCCCCGCGGCGTT
ATGAGAAAACAACGACGTAGATCGGTCAGGCCACGTGTCCGGCAAAGACC
GAGAGCCCGGAGAAGGGAAAGAAGGCAGAAGGGTGGAAACACGAGTGGGT
AACTATTGGGAAATAGGAAAGAGGGGAGGAGCGTAAAGACAACAGCGAAA
CCATAAGTCATGA back to topprotein sequence of jgi.p|Nanoce1779_2|609431 >mRNA_9870-protein ID=mRNA_9870-protein|Name=jgi.p|Nanoce1779_2|609431|organism=Nannochloropsis oceanica|type=polypeptide|length=275bp
MGVAPAAADGGGTEEGGGERGGIPADANGHVRFWALFRYHSSSTFEWEDG
REIEEQEDEEKGEDLPSSTAPASYPTRRFPYYFLFLETSLLFYCLYLLLK
GGNSDLTCYIIPGTDSPFSPSLALWAQATYDRLLQTSSSSRRSATQMCFA
YWPCPLPTTSHSNPPFHAPFLLRYRQAKARTLLDVIMETGIFASTAYALT
RLLQKSYFFIDIERYMDPAFEPPYKNIHEHRCRVMTRGMVEDYIYLRREM
FIDACVQRGVEGRESEMGGRGGRR* back to topmRNA from alignment at scaffold_45:100113..101423+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9870 ID=mRNA_9870|Name=jgi.p|Nanoce1779_2|609431|organism=Nannochloropsis oceanica|type=mRNA|length=1311bp|location=Sequence derived from alignment at scaffold_45:100113..101423+ (Nannochloropsis oceanica)
CAGCAGCAGCAGCAGCAGCAGCAGGAGAATAAGACCGGTAGACGAAAAAG
TCTTGGAGGGATGGGAGTGGCACCTGCGGCTGCTGACGGAGGAGGGACGG
AGGAGGGAGGGGGAGAACGGGGAGGAATTCCGGCGGATGCTAACGGCCAT
GTCCGTTTCTGGGCCCTTTTCCGTTACCATAGCAGCAGCACTTTCGAATG
GGAAGATGGTAGGGAGATAGAAGAGCAGGAGGACGAGGAGAAGGGGGAAG
ACCTCCCTTCCTCCACCGCGCCTGCTTCTTATCCCACTCGCCGATTCCCC
TATTATTTCCTCTTTCTCGAGACGTCCCTCCTCTTCTACTGTCTATATCT
CCTTCTCAAAGGAGGGAACAGCGACCTAACCTGCTACATCATCCCCGGCA
CCGACTCTCCCTTCTCTCCCTCTCTCGCTTTGTGGGCCCAAGCCACCTAC
GACCGACTCCTTCAAACTTCCTCCTCCTCTCGTCGCTCCGCCACGCAAAT
GTGCTTCGCCTACTGGCCCTGTCCCTTACCAACCACCAGTCACTCCAACC
CTCCCTTCCATGCGCCTTTCCTCCTTCGATACCGACAAGCAAAGGCGAGG
ACCCTCCTGGACGTTATCATGGAAACGGGCATCTTCGCCTCTACGGCTTA
TGCACTCACGCGGCTGTTGCAGAAAAGCTATTTTTTCATCGACATTGAGA
GGTATATGGATCCGGCGTTCGAGCCTCCATATAAAAATATCCATGAGCAC
AGGTACTTTCTATACTTCAGTGATCATTTGAGTGTTTATTTTCCGGCAAC
CATTTTTCTTTTATAGTTGGTGTTATGCCGCGTTGGCTTAGTGGGCGGAA
GGAGGAAATTATTATCGTATCAGTTTTGACGTATGTGATGAAAAAGGACT
GTATGATCAATCCAACAACCAGTCGTCGTCGACTTCCTTTCCCTCCCCTT
CTTCCCTTATCGTCCCCTCTTTCCCTTTGTCTTTTCCTCCTTCCCGACAG
GTGCCGTGTCATGACCAGGGGGATGGTGGAAGACTACATCTACCTGCGAC
GAGAGATGTTCATCGACGCGTGCGTCCAACGAGGAGTGGAGGGAAGAGAG
AGCGAGATGGGAGGGAGAGGAGGAAGGAGATAAAACCCCCGCGGCGTTAT
GAGAAAACAACGACGTAGATCGGTCAGGCCACGTGTCCGGCAAAGACCGA
GAGCCCGGAGAAGGGAAAGAAGGCAGAAGGGTGGAAACACGAGTGGGTAA
CTATTGGGAAATAGGAAAGAGGGGAGGAGCGTAAAGACAACAGCGAAACC
ATAAGTCATGA back to topCoding sequence (CDS) from alignment at scaffold_45:100113..101423+ >mRNA_9870 ID=mRNA_9870|Name=jgi.p|Nanoce1779_2|609431|organism=Nannochloropsis oceanica|type=CDS|length=1650bp|location=Sequence derived from alignment at scaffold_45:100113..101423+ (Nannochloropsis oceanica)
ATGGGAGTGGCACCTGCGGCTGCTGACGGAGGAGGGACGGAGGAGGGAGG
GGGAGAACGGGGAGGAATTCCGGCGGATGCTAACGGCCATGTCCGTTTCT
GGGCCCTTTTCCGTTACCATAGCAGCAGCACTTTCGAATGGGAAGATGGT
AGGGAGATAGAAGAGCAGGAGGACGAGGAGAAGGGGGAAGACCTCCCTTC
CTCCACCGCGCCTGCTTCTTATCCCACTCGCCGATTCCCCTATTATTTCC
TCTTTCTCGAGACGTCCCTCCTCTTCTACTGTCTATATCTCCTTCTCAAA
GGAGGGAACAGCGACCTAACCTGCTACATCATCCCCGGCACCGACTCTCC
CTTCTCTCCCTCTCTCGCTTTGTGGGCCCAAGCCACCTACGACCGACTCC
TTCAAACTTCCTCCTCCTCTCGTCGCTCCGCCACGCAAATGTGCTTCGCC
TACTGGCCCTGTCCCTTACCAACCACCAGTCACTCCAACCCTCCCTTCCA
TGCGCCTTTCCTCCTTCGATACCGACAAGCAAAGGCGAGGACCCTCCTGG
ACGTTATCATGGAAACGGGCATCTTCGCCTCTACGGCTTATGCACTCACG
CGGCTGTTGCAGAAAAGCTATTTTTTCATCGACATTGAGAGGTATATGGA
TCCGGCGTTCGAGCCTCCATATAAAAATATCCATGAGCACAGGTGCCGTG
TCATGACCAGGGGGATGGTGGAAGACTACATCTACCTGCGACGAGAGATG
TTCATCGACGCGTGCGTCCAACGAGGAGTGGAGGGAAGAGAGAGCGAGAT
GGGAGGGAGAGGAGGAAGGAGATAAATGGGAGTGGCACCTGCGGCTGCTG
ACGGAGGAGGGACGGAGGAGGGAGGGGGAGAACGGGGAGGAATTCCGGCG
GATGCTAACGGCCATGTCCGTTTCTGGGCCCTTTTCCGTTACCATAGCAG
CAGCACTTTCGAATGGGAAGATGGTAGGGAGATAGAAGAGCAGGAGGACG
AGGAGAAGGGGGAAGACCTCCCTTCCTCCACCGCGCCTGCTTCTTATCCC
ACTCGCCGATTCCCCTATTATTTCCTCTTTCTCGAGACGTCCCTCCTCTT
CTACTGTCTATATCTCCTTCTCAAAGGAGGGAACAGCGACCTAACCTGCT
ACATCATCCCCGGCACCGACTCTCCCTTCTCTCCCTCTCTCGCTTTGTGG
GCCCAAGCCACCTACGACCGACTCCTTCAAACTTCCTCCTCCTCTCGTCG
CTCCGCCACGCAAATGTGCTTCGCCTACTGGCCCTGTCCCTTACCAACCA
CCAGTCACTCCAACCCTCCCTTCCATGCGCCTTTCCTCCTTCGATACCGA
CAAGCAAAGGCGAGGACCCTCCTGGACGTTATCATGGAAACGGGCATCTT
CGCCTCTACGGCTTATGCACTCACGCGGCTGTTGCAGAAAAGCTATTTTT
TCATCGACATTGAGAGGTATATGGATCCGGCGTTCGAGCCTCCATATAAA
AATATCCATGAGCACAGGTGCCGTGTCATGACCAGGGGGATGGTGGAAGA
CTACATCTACCTGCGACGAGAGATGTTCATCGACGCGTGCGTCCAACGAG
GAGTGGAGGGAAGAGAGAGCGAGATGGGAGGGAGAGGAGGAAGGAGATAA back to top
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