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Properties
| Property Name | Value |
|---|
| TranscriptId | 609516 |
| Track | FilteredModels2 |
| ProteinId | 609430 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_45 | supercontig | scaffold_45:97853..99498 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9869 ID=mRNA_9869|Name=jgi.p|Nanoce1779_2|609430|organism=Nannochloropsis oceanica|type=mRNA|length=1646bp
CGTCCTCATCCGCCACCATCGACACCACCACCACCACCTCATTACATCAA
CAGCCTCCATCCTCCTCCTCCTCCTCTTCCTCTTCCTTTTCCTCATCCTC
CTCCTCCTTCCGCTTCTTTTTTGCCACCATTAACACCACCATTACCATCC
AGAGCCATCAACCAGCACCAAAAGCAAAAGCCACTTCATCCTCCCACACC
ACAAAACATTGTCGCAGCTGCAGCGGTAGGGAGCCTGAATCCTTTCGATG
AGGAAGAAGGTAGAGGGAAAGACTTTGTCCATGCCCCGCAAATTAAAATC
AGTCAGGCGCTTCTCCGCAAGCAGGAATCGTGCGCACCCGTGGTCTTGAT
CGAGGTAGGAGGTGGAGGGGGAGGAGTCAGGCACGTAGCCACTTCTCCAA
GCAAGCGTTACCAGCACTATTTACAGCAGCAGCGGCAGAACGACTTTGCT
TCCACTACATCGCCCCGTCCTTGTCACGATGAACACCTTCCAATAACTCA
GATGCCGGAGCGAGGGCGGCCCACCATCAACGGCAACAATGCGAACAACA
GCACCCGCACCAGCAGCATCTCTCCCTTGCCTCTTCGCCGTCAATCGTAT
CTTGCGCTTTCTCCTCCGTCATCTTCACCCGTTGCTGGTCGGTCTCCTTC
CACACCAAATGGAGAGTATCGAGAAGACGAGGAGGGTGCGAGGGGGGTAG
GGAGGGGAAATAGCCCGTCTTCCACTTCTGGCATACGCGGTAGCCGTCGA
ATCTCCTTCCGCTTTCAGACAGCCTCCCCCTCTCCTGGCCCTTCTTCCTC
CCCCCCCTCCCCTTTGTTAGCAGAACCAGAAAAAAGAAGAGGCGGCGCAG
AAGCGGCACCAGCAACAGCAGTACCAGCAGCGGTAGAGCTTCAGCCTGAC
TTTCTCAAATCTTACGATGCGAGGAAAATAGGGTTTCAGATAGCAAAGAA
TTACGTGCGTTTATACACTCCCCAAGAAAGAGAGCGCCTGGACGAGGCCT
ACGAAGGTCTGTTGAAGAAACACGGACGCGACCCAGTGGTCCAGTGGTTG
CATCAAGAGGTAAGCAGGCAACCCCTCATTCCCTTCCTCCCTCCCTCCCT
CTCTCCCTCTTTCTTCCCTCGCCTTTTTTTCTATCGTAACAGCTACCTGG
CACCTTCTCTCCCTCCCTTTCTCCCCCCCTCCAGATTGTCCTAGATGTGC
TTGAGTCCTCTTCCACTCCCTACCTGACTATCCTCCTGAACGGCTTCTGC
CCCCCGATCCTCCGTCGCTTCCTCCTTTACCTTCTCTTCCCCTTTGGCTA
CCTCTTCTCCCTCTGCTGCTGCCTCCCCCGCTCCCTCCGTCCCTCTCTCT
CCTCACTCCGTCGGAACCTGACTCCTTCGTATTGGCAAGCCAACCTGGAC
GACGAGATTACGTTCTACACCTTTCAGTTCATTGCACTTTCCTTCTTCCC
CCTCCTTCCTTCCCTCCTCTCCGCTTCCCTGGCCATCCTGTCTTCCCGCT
CCTGGACCCTGGTGCCCCAAGCCTGCTCGTCCTCCCTCCCTTCCTCCTTC
TCCAACTTCAACTCTGCCTGTCCGTTGGATTTTTATGCCGACATGGGAGG
GAGGGAGGAAGGAAGGGAGGACGGGCTGGTGAGTCATGTCTTCATG back to topprotein sequence of jgi.p|Nanoce1779_2|609430 >mRNA_9869-protein ID=mRNA_9869-protein|Name=jgi.p|Nanoce1779_2|609430|organism=Nannochloropsis oceanica|type=polypeptide|length=231bp
MPERGRPTINGNNANNSTRTSSISPLPLRRQSYLALSPPSSSPVAGRSPS
TPNGEYREDEEGARGVGRGNSPSSTSGIRGSRRISFRFQTASPSPGPSSS
PPSPLLAEPEKRRGGAEAAPATAVPAAVELQPDFLKSYDARKIGFQIAKN
YVRLYTPQERERLDEAYEGLLKKHGRDPVVQWLHQEVSRQPLIPFLPPSL
SPSFFPRLFFYRNSYLAPSLPPFLPPSRLS* back to topmRNA from alignment at scaffold_45:97853..99498+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9869 ID=mRNA_9869|Name=jgi.p|Nanoce1779_2|609430|organism=Nannochloropsis oceanica|type=mRNA|length=1646bp|location=Sequence derived from alignment at scaffold_45:97853..99498+ (Nannochloropsis oceanica)
CGTCCTCATCCGCCACCATCGACACCACCACCACCACCTCATTACATCAA
CAGCCTCCATCCTCCTCCTCCTCCTCTTCCTCTTCCTTTTCCTCATCCTC
CTCCTCCTTCCGCTTCTTTTTTGCCACCATTAACACCACCATTACCATCC
AGAGCCATCAACCAGCACCAAAAGCAAAAGCCACTTCATCCTCCCACACC
ACAAAACATTGTCGCAGCTGCAGCGGTAGGGAGCCTGAATCCTTTCGATG
AGGAAGAAGGTAGAGGGAAAGACTTTGTCCATGCCCCGCAAATTAAAATC
AGTCAGGCGCTTCTCCGCAAGCAGGAATCGTGCGCACCCGTGGTCTTGAT
CGAGGTAGGAGGTGGAGGGGGAGGAGTCAGGCACGTAGCCACTTCTCCAA
GCAAGCGTTACCAGCACTATTTACAGCAGCAGCGGCAGAACGACTTTGCT
TCCACTACATCGCCCCGTCCTTGTCACGATGAACACCTTCCAATAACTCA
GATGCCGGAGCGAGGGCGGCCCACCATCAACGGCAACAATGCGAACAACA
GCACCCGCACCAGCAGCATCTCTCCCTTGCCTCTTCGCCGTCAATCGTAT
CTTGCGCTTTCTCCTCCGTCATCTTCACCCGTTGCTGGTCGGTCTCCTTC
CACACCAAATGGAGAGTATCGAGAAGACGAGGAGGGTGCGAGGGGGGTAG
GGAGGGGAAATAGCCCGTCTTCCACTTCTGGCATACGCGGTAGCCGTCGA
ATCTCCTTCCGCTTTCAGACAGCCTCCCCCTCTCCTGGCCCTTCTTCCTC
CCCCCCCTCCCCTTTGTTAGCAGAACCAGAAAAAAGAAGAGGCGGCGCAG
AAGCGGCACCAGCAACAGCAGTACCAGCAGCGGTAGAGCTTCAGCCTGAC
TTTCTCAAATCTTACGATGCGAGGAAAATAGGGTTTCAGATAGCAAAGAA
TTACGTGCGTTTATACACTCCCCAAGAAAGAGAGCGCCTGGACGAGGCCT
ACGAAGGTCTGTTGAAGAAACACGGACGCGACCCAGTGGTCCAGTGGTTG
CATCAAGAGGTAAGCAGGCAACCCCTCATTCCCTTCCTCCCTCCCTCCCT
CTCTCCCTCTTTCTTCCCTCGCCTTTTTTTCTATCGTAACAGCTACCTGG
CACCTTCTCTCCCTCCCTTTCTCCCCCCCTCCAGATTGTCCTAGATGTGC
TTGAGTCCTCTTCCACTCCCTACCTGACTATCCTCCTGAACGGCTTCTGC
CCCCCGATCCTCCGTCGCTTCCTCCTTTACCTTCTCTTCCCCTTTGGCTA
CCTCTTCTCCCTCTGCTGCTGCCTCCCCCGCTCCCTCCGTCCCTCTCTCT
CCTCACTCCGTCGGAACCTGACTCCTTCGTATTGGCAAGCCAACCTGGAC
GACGAGATTACGTTCTACACCTTTCAGTTCATTGCACTTTCCTTCTTCCC
CCTCCTTCCTTCCCTCCTCTCCGCTTCCCTGGCCATCCTGTCTTCCCGCT
CCTGGACCCTGGTGCCCCAAGCCTGCTCGTCCTCCCTCCCTTCCTCCTTC
TCCAACTTCAACTCTGCCTGTCCGTTGGATTTTTATGCCGACATGGGAGG
GAGGGAGGAAGGAAGGGAGGACGGGCTGGTGAGTCATGTCTTCATG back to topCoding sequence (CDS) from alignment at scaffold_45:97853..99498+ >mRNA_9869 ID=mRNA_9869|Name=jgi.p|Nanoce1779_2|609430|organism=Nannochloropsis oceanica|type=CDS|length=693bp|location=Sequence derived from alignment at scaffold_45:97853..99498+ (Nannochloropsis oceanica)
ATGCCGGAGCGAGGGCGGCCCACCATCAACGGCAACAATGCGAACAACAG
CACCCGCACCAGCAGCATCTCTCCCTTGCCTCTTCGCCGTCAATCGTATC
TTGCGCTTTCTCCTCCGTCATCTTCACCCGTTGCTGGTCGGTCTCCTTCC
ACACCAAATGGAGAGTATCGAGAAGACGAGGAGGGTGCGAGGGGGGTAGG
GAGGGGAAATAGCCCGTCTTCCACTTCTGGCATACGCGGTAGCCGTCGAA
TCTCCTTCCGCTTTCAGACAGCCTCCCCCTCTCCTGGCCCTTCTTCCTCC
CCCCCCTCCCCTTTGTTAGCAGAACCAGAAAAAAGAAGAGGCGGCGCAGA
AGCGGCACCAGCAACAGCAGTACCAGCAGCGGTAGAGCTTCAGCCTGACT
TTCTCAAATCTTACGATGCGAGGAAAATAGGGTTTCAGATAGCAAAGAAT
TACGTGCGTTTATACACTCCCCAAGAAAGAGAGCGCCTGGACGAGGCCTA
CGAAGGTCTGTTGAAGAAACACGGACGCGACCCAGTGGTCCAGTGGTTGC
ATCAAGAGGTAAGCAGGCAACCCCTCATTCCCTTCCTCCCTCCCTCCCTC
TCTCCCTCTTTCTTCCCTCGCCTTTTTTTCTATCGTAACAGCTACCTGGC
ACCTTCTCTCCCTCCCTTTCTCCCCCCCTCCAGATTGTCCTAG back to top
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