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Properties
| Property Name | Value |
|---|
| TranscriptId | 609469 |
| Track | FilteredModels2 |
| ProteinId | 609383 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_45 | supercontig | scaffold_45:70833..71710 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9860 ID=mRNA_9860|Name=jgi.p|Nanoce1779_2|609383|organism=Nannochloropsis oceanica|type=mRNA|length=878bp
GCTTCTCATAAATTGTCTCTTACTTTATCCAGGAATGGCCACCTCCTTTC
CCTCAGCATTTTACTTGGCCAGGTAAGGAAAAAATTGACATGGGCCCACT
TCCACAACCTCTGGCTTATCCTCACAACGCACAGTGATCCGAGCAACACC
ACATGGCAGGGTCAGCAAATGCTGGTAAGACATTTGGCAGCTCTGACCAT
TCAATCTGTGGTGCGTGGCGGGCTGGTGCGCAGGAGGTCTGCGGCAGCGG
CGGAGGCGGCACGACGCCAGCAGGCGAAGGAAAAGGTTGCTTCTTCATCC
AAAGCCAATAACAAGAAGGAAATTGGCAACAGACTGTGCAATGTTCCGAT
CAGAACAGCCTGCTACTCTACAAATAGAAGCAGCAGTAGTAGCGGCAGCG
TTAGCACTTGCAATACTAATAGCAGCACCTGCAATGGAGAAGAGCACGAC
ACAGGGCACGTTTCAGCCACACGCACGTCTCCGTCCCTTCATGCACCATC
CACCAAGCCTGCCAGCCCCATCATCATCACTTTTCCTGATTCTTTCCCTC
CTCCTGTACGTAGCTCCATTCCTAATTTTTCACAATTGGTGCAAGATCTG
CCTGCGTCGTCACCGTGCTTTTCGTCCTTCCCTCCCCTCTCTCCCCTTCC
TCGCCGACGCCCCTTGTCCGCCTGTGCGTGCATTTGGGCGGCAGCAGGAG
CAGACAAGGCGAAAGGAAAAAGAAATGAACAAGATGGTCAGAAATCTGGA
AGAATAAGCGAAGCAGTGGGGGAAGGAAAGAAAAAAGGGGAGGAGGAACG
CGATTGGAAAAAGGGAGGAAGAGGAGGGGGAGGAGAGGATGAGGATCAAG
TAGAAGGACGAAAGAGGGCAGCACCGGC back to topprotein sequence of jgi.p|Nanoce1779_2|609383 >mRNA_9860-protein ID=mRNA_9860-protein|Name=jgi.p|Nanoce1779_2|609383|organism=Nannochloropsis oceanica|type=polypeptide|length=139bp
MFRSEQPATLQIEAAVVAAALALAILIAAPAMEKSTTQGTFQPHARLRPF
MHHPPSLPAPSSSLFLILSLLLYVAPFLIFHNWCKICLRRHRAFRPSLPS
LPFLADAPCPPVRAFGRQQEQTRRKEKEMNKMVRNLEE* back to topmRNA from alignment at scaffold_45:70833..71710- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9860 ID=mRNA_9860|Name=jgi.p|Nanoce1779_2|609383|organism=Nannochloropsis oceanica|type=mRNA|length=878bp|location=Sequence derived from alignment at scaffold_45:70833..71710- (Nannochloropsis oceanica)
GCTTCTCATAAATTGTCTCTTACTTTATCCAGGAATGGCCACCTCCTTTC
CCTCAGCATTTTACTTGGCCAGGTAAGGAAAAAATTGACATGGGCCCACT
TCCACAACCTCTGGCTTATCCTCACAACGCACAGTGATCCGAGCAACACC
ACATGGCAGGGTCAGCAAATGCTGGTAAGACATTTGGCAGCTCTGACCAT
TCAATCTGTGGTGCGTGGCGGGCTGGTGCGCAGGAGGTCTGCGGCAGCGG
CGGAGGCGGCACGACGCCAGCAGGCGAAGGAAAAGGTTGCTTCTTCATCC
AAAGCCAATAACAAGAAGGAAATTGGCAACAGACTGTGCAATGTTCCGAT
CAGAACAGCCTGCTACTCTACAAATAGAAGCAGCAGTAGTAGCGGCAGCG
TTAGCACTTGCAATACTAATAGCAGCACCTGCAATGGAGAAGAGCACGAC
ACAGGGCACGTTTCAGCCACACGCACGTCTCCGTCCCTTCATGCACCATC
CACCAAGCCTGCCAGCCCCATCATCATCACTTTTCCTGATTCTTTCCCTC
CTCCTGTACGTAGCTCCATTCCTAATTTTTCACAATTGGTGCAAGATCTG
CCTGCGTCGTCACCGTGCTTTTCGTCCTTCCCTCCCCTCTCTCCCCTTCC
TCGCCGACGCCCCTTGTCCGCCTGTGCGTGCATTTGGGCGGCAGCAGGAG
CAGACAAGGCGAAAGGAAAAAGAAATGAACAAGATGGTCAGAAATCTGGA
AGAATAAGCGAAGCAGTGGGGGAAGGAAAGAAAAAAGGGGAGGAGGAACG
CGATTGGAAAAAGGGAGGAAGAGGAGGGGGAGGAGAGGATGAGGATCAAG
TAGAAGGACGAAAGAGGGCAGCACCGGC back to topCoding sequence (CDS) from alignment at scaffold_45:70833..71710- >mRNA_9860 ID=mRNA_9860|Name=jgi.p|Nanoce1779_2|609383|organism=Nannochloropsis oceanica|type=CDS|length=417bp|location=Sequence derived from alignment at scaffold_45:70833..71710- (Nannochloropsis oceanica)
ATGTTCCGATCAGAACAGCCTGCTACTCTACAAATAGAAGCAGCAGTAGT
AGCGGCAGCGTTAGCACTTGCAATACTAATAGCAGCACCTGCAATGGAGA
AGAGCACGACACAGGGCACGTTTCAGCCACACGCACGTCTCCGTCCCTTC
ATGCACCATCCACCAAGCCTGCCAGCCCCATCATCATCACTTTTCCTGAT
TCTTTCCCTCCTCCTGTACGTAGCTCCATTCCTAATTTTTCACAATTGGT
GCAAGATCTGCCTGCGTCGTCACCGTGCTTTTCGTCCTTCCCTCCCCTCT
CTCCCCTTCCTCGCCGACGCCCCTTGTCCGCCTGTGCGTGCATTTGGGCG
GCAGCAGGAGCAGACAAGGCGAAAGGAAAAAGAAATGAACAAGATGGTCA
GAAATCTGGAAGAATAA back to top
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