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Properties
| Property Name | Value |
|---|
| TranscriptId | 314270 |
| Track | FilteredModels2 |
| ProteinId | 314184 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_45 | supercontig | scaffold_45:40109..41891 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9850 ID=mRNA_9850|Name=jgi.p|Nanoce1779_2|314184|organism=Nannochloropsis oceanica|type=mRNA|length=1197bp
TAACCCTACGTCTCTGCACACACATCAACACAGCGCAAGCCAACAAAGGG
CCTGACGCCGGTTACCACGTGTCGGCGGCTGCTTGTGTTCCGGAGACACT
ACCGACGCCCACCACCACCACCACCACCACTAGAATCAGCATCAGCATCA
CCGTCGTCGTCATCCCCAGCGACCCCTACTTCTCCTCCTCCTGAATATAT
AAATACAAACCATGGAAGCCACTGCCACCATCTCCCTTCTTTTGGCGCAC
CAATCCGGCCTTCTCAACACTGCCGTCGATGCCATCGTCCCAGTGTATAC
TCTCGCCGTCCTCTGCATCCTCGTAACCGTTCACCGACAACGCCAGGACT
ACGGTAACTCATCCTCCCTCCCATCATCGTCCTCAGACGAAGCCTATCTC
GTAGCATTCGAAAAAGACCTATTACGTGCTGCCAAGGCCAAGGAAGTGCA
ACATAAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGAGAAC
AGGAAAAACAGAATCGAAGAGCAGAGGCCAAGAAGGGGGAGGAAGGCGGG
ACGGAGGAAACGAAGGAGGAAAGAGGGAAGATCGAAGGACCTAACTTCAG
TGGGGTATGGAAATCGATTCCAGGCAAGAATTCCAATTACGACGAGTTTC
TGACAGTCCAAGGGGTGCCTTATCTCAAGCGGAAGATTGCAAACAGCACA
GTGGTCACCCACACGATTCAACAGGATGGGGATATATTGAAATTGGAGGT
GCAACCACTGGACATGAAGACCACGTTCCACATCGGTGGCCCCCCTAGCA
CCTCCTACATCGGCAAGACTCTTTTCGAAGACACCATGACCTACAACGAT
GAAGGGGCTTTGGTTTTAGTTAAAAAAAACGAGAAAGATGGGATGGAAAT
AACTGCTATCCGTTCCCTCGAAGAAGGAGGGAAGGTGCTGGTGATGAAAC
AGTGCGTCAAGAATCTAAAGGACGGGAAGGAGACACATGCGGAACAGACC
TTCGAGAAGGCCGAATAAGAGAGGGACATCGCACAGGTAGAAGCTGAAAG
CAAGCGTCATTCAATATTGCTACTCCTTTGCATTGTCCCTTGATGGAAGG
AGGGGGAGGGATGGAAGAAGGAGGAATGGGGGGGGTTGTGCAGCAGGTCA
AAGGGAATATAATGAAAAGAAATCTGAACAAACTTTATGCATGCGGT back to topprotein sequence of jgi.p|Nanoce1779_2|314184 >mRNA_9850-protein ID=mRNA_9850-protein|Name=jgi.p|Nanoce1779_2|314184|organism=Nannochloropsis oceanica|type=polypeptide|length=269bp
MEATATISLLLAHQSGLLNTAVDAIVPVYTLAVLCILVTVHRQRQDYGNS
SSLPSSSSDEAYLVAFEKDLLRAAKAKEVQHKQQQQQQQQQQQQREQEKQ
NRRAEAKKGEEGGTEETKEERGKIEGPNFSGVWKSIPGKNSNYDEFLTVQ
GVPYLKRKIANSTVVTHTIQQDGDILKLEVQPLDMKTTFHIGGPPSTSYI
GKTLFEDTMTYNDEGALVLVKKNEKDGMEITAIRSLEEGGKVLVMKQCVK
NLKDGKETHAEQTFEKAE* back to topmRNA from alignment at scaffold_45:40109..41891- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9850 ID=mRNA_9850|Name=jgi.p|Nanoce1779_2|314184|organism=Nannochloropsis oceanica|type=mRNA|length=1783bp|location=Sequence derived from alignment at scaffold_45:40109..41891- (Nannochloropsis oceanica)
TAACCCTACGTCTCTGCACACACATCAACACAGCGCAAGCCAACAAAGGG
CCTGACGCCGGTTACCACGTGTCGGCGGCTGCTTGTGTTCCGGAGACACT
ACCGACGCCCACCACCACCACCACCACCACTAGAATCAGCATCAGCATCA
CCGTCGTCGTCATCCCCAGCGACCCCTACTTCTCCTCCTCCTGAATATAT
AAATACAAACCATGGAAGCCACTGCCACCATCTCCCTTCTTTTGGCGCAC
CAATCCGGCCTTCTCAACACTGCCGTCGATGCCATCGTCCCAGTAAGCCT
CTCCCTCTCCCCCTCCCTTCCCTCCCTACCTCCCTTCTCTCACCGCTCCC
TTTCCTCGTTCCTAACTCCATCCTTCCACAGGTGTATACTCTCGCCGTCC
TCTGCATCCTCGTAACCGTTCACCGACAACGCCAGGACTACGGTAACTCA
TCCTCCCTCCCATCATCGTCCTCAGACGAAGCCTATCTCGTAGCATTCGA
AAAAGACCTATTACGTGCTGCCAAGGCCAAGGAAGTGCAACATAAACAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGAGAACAGGAAAAACAG
AATCGAAGAGCAGAGGCCAAGAAGGGGGAGGAAGGCGGGACGGAGGAAAC
GAAGGAGGAAAGAGGGAAGATCGAAGGACCTAACTTCAGTGGGGTATGGA
AATCGATTCCAGGCAAGAATTCCAATTACGACGAGTTTCTGACAGTCCAA
GGGGTGCCTTATCTCAAGCGGAAGATTGCAAACAGCACAGTGGTCACCCA
CACGATTCAACAGGATGGGGATATATTGAAATTGGAGGTATGTATGCAGA
CTCCTTCCTTCCCTTCCTCCCTCCTTCCCTCCTTTCCTGCTTCCCTCCTT
TCTGCCTCCTCTCTTTTCAAGCGGAAGAGAGCATGAATAAGTATGATGAC
AATGATGATGACTATGATTATGAGTTTCTGACGGCGTAAGGGGCACCTCC
CATCCCTCCCTCCCTCCCTCCCTCCCTTCCAAGGTGCAACCACTGGACAT
GAAGACCACGTTCCACATCGGTGGCCCCCCTAGGTATGTATAAAGATCCC
TCCCTTCCTCCCTCACCTCCCTCCCTCTCTATTTCCCTCGCTTCATCGTT
CATATTCCTTGTTTTTTCTCTATATGTCTCCTTCCTCCATGCTCCTAATC
TCTCTCTCTCTCCTTTCCTCCCTTCCTCAGCACCTCCTACATCGGCAAGA
CTCTTTTCGAAGACACCATGACCTACAACGATGAAGGGGCTTTGGTTTTA
GTTAAAAAAAACGAGAAAGATGGGATGGAAATAACTGCTATCCGTTCCCT
CGAAGAAGGAGGGAAGGTGCTGGTGATGGTAAGTGGGAGGGGAGGAGGAA
GAGAGGGAGGGAGGCAAGGATATCGACAAGGACATCGACAAGATTGAGAT
ACCCAGATTAATGCTCATACAATCATAAACGCACAATTCTTACATTATTA
CAATTATTGCTGTTATAAAACCATTTAAATAGAAACAGTGCGTCAAGAAT
CTAAAGGACGGGAAGGAGACACATGCGGAACAGACCTTCGAGAAGGCCGA
ATAAGAGAGGGACATCGCACAGGTAGAAGCTGAAAGCAAGCGTCATTCAA
TATTGCTACTCCTTTGCATTGTCCCTTGATGGAAGGAGGGGGAGGGATGG
AAGAAGGAGGAATGGGGGGGGTTGTGCAGCAGGTCAAAGGGAATATAATG
AAAAGAAATCTGAACAAACTTTATGCATGCGGT back to topCoding sequence (CDS) from alignment at scaffold_45:40109..41891- >mRNA_9850 ID=mRNA_9850|Name=jgi.p|Nanoce1779_2|314184|organism=Nannochloropsis oceanica|type=CDS|length=4035bp|location=Sequence derived from alignment at scaffold_45:40109..41891- (Nannochloropsis oceanica)
AAACAGTGCGTCAAGAATCTAAAGGACGGGAAGGAGACACATGCGGAACA
GACCTTCGAGAAGGCCGAATAACACCTCCTACATCGGCAAGACTCTTTTC
GAAGACACCATGACCTACAACGATGAAGGGGCTTTGGTTTTAGTTAAAAA
AAACGAGAAAGATGGGATGGAAATAACTGCTATCCGTTCCCTCGAAGAAG
GAGGGAAGGTGCTGGTGATGGTGCAACCACTGGACATGAAGACCACGTTC
CACATCGGTGGCCCCCCTAGGTGTATACTCTCGCCGTCCTCTGCATCCTC
GTAACCGTTCACCGACAACGCCAGGACTACGGTAACTCATCCTCCCTCCC
ATCATCGTCCTCAGACGAAGCCTATCTCGTAGCATTCGAAAAAGACCTAT
TACGTGCTGCCAAGGCCAAGGAAGTGCAACATAAACAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCGAGAACAGGAAAAACAGAATCGAAGAGC
AGAGGCCAAGAAGGGGGAGGAAGGCGGGACGGAGGAAACGAAGGAGGAAA
GAGGGAAGATCGAAGGACCTAACTTCAGTGGGGTATGGAAATCGATTCCA
GGCAAGAATTCCAATTACGACGAGTTTCTGACAGTCCAAGGGGTGCCTTA
TCTCAAGCGGAAGATTGCAAACAGCACAGTGGTCACCCACACGATTCAAC
AGGATGGGGATATATTGAAATTGGAGATGGAAGCCACTGCCACCATCTCC
CTTCTTTTGGCGCACCAATCCGGCCTTCTCAACACTGCCGTCGATGCCAT
CGTCCCAAAACAGTGCGTCAAGAATCTAAAGGACGGGAAGGAGACACATG
CGGAACAGACCTTCGAGAAGGCCGAATAACACCTCCTACATCGGCAAGAC
TCTTTTCGAAGACACCATGACCTACAACGATGAAGGGGCTTTGGTTTTAG
TTAAAAAAAACGAGAAAGATGGGATGGAAATAACTGCTATCCGTTCCCTC
GAAGAAGGAGGGAAGGTGCTGGTGATGGTGCAACCACTGGACATGAAGAC
CACGTTCCACATCGGTGGCCCCCCTAGGTGTATACTCTCGCCGTCCTCTG
CATCCTCGTAACCGTTCACCGACAACGCCAGGACTACGGTAACTCATCCT
CCCTCCCATCATCGTCCTCAGACGAAGCCTATCTCGTAGCATTCGAAAAA
GACCTATTACGTGCTGCCAAGGCCAAGGAAGTGCAACATAAACAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCGAGAACAGGAAAAACAGAATC
GAAGAGCAGAGGCCAAGAAGGGGGAGGAAGGCGGGACGGAGGAAACGAAG
GAGGAAAGAGGGAAGATCGAAGGACCTAACTTCAGTGGGGTATGGAAATC
GATTCCAGGCAAGAATTCCAATTACGACGAGTTTCTGACAGTCCAAGGGG
TGCCTTATCTCAAGCGGAAGATTGCAAACAGCACAGTGGTCACCCACACG
ATTCAACAGGATGGGGATATATTGAAATTGGAGATGGAAGCCACTGCCAC
CATCTCCCTTCTTTTGGCGCACCAATCCGGCCTTCTCAACACTGCCGTCG
ATGCCATCGTCCCAAAACAGTGCGTCAAGAATCTAAAGGACGGGAAGGAG
ACACATGCGGAACAGACCTTCGAGAAGGCCGAATAACACCTCCTACATCG
GCAAGACTCTTTTCGAAGACACCATGACCTACAACGATGAAGGGGCTTTG
GTTTTAGTTAAAAAAAACGAGAAAGATGGGATGGAAATAACTGCTATCCG
TTCCCTCGAAGAAGGAGGGAAGGTGCTGGTGATGGTGCAACCACTGGACA
TGAAGACCACGTTCCACATCGGTGGCCCCCCTAGGTGTATACTCTCGCCG
TCCTCTGCATCCTCGTAACCGTTCACCGACAACGCCAGGACTACGGTAAC
TCATCCTCCCTCCCATCATCGTCCTCAGACGAAGCCTATCTCGTAGCATT
CGAAAAAGACCTATTACGTGCTGCCAAGGCCAAGGAAGTGCAACATAAAC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGAGAACAGGAAAAA
CAGAATCGAAGAGCAGAGGCCAAGAAGGGGGAGGAAGGCGGGACGGAGGA
AACGAAGGAGGAAAGAGGGAAGATCGAAGGACCTAACTTCAGTGGGGTAT
GGAAATCGATTCCAGGCAAGAATTCCAATTACGACGAGTTTCTGACAGTC
CAAGGGGTGCCTTATCTCAAGCGGAAGATTGCAAACAGCACAGTGGTCAC
CCACACGATTCAACAGGATGGGGATATATTGAAATTGGAGATGGAAGCCA
CTGCCACCATCTCCCTTCTTTTGGCGCACCAATCCGGCCTTCTCAACACT
GCCGTCGATGCCATCGTCCCAAAACAGTGCGTCAAGAATCTAAAGGACGG
GAAGGAGACACATGCGGAACAGACCTTCGAGAAGGCCGAATAACACCTCC
TACATCGGCAAGACTCTTTTCGAAGACACCATGACCTACAACGATGAAGG
GGCTTTGGTTTTAGTTAAAAAAAACGAGAAAGATGGGATGGAAATAACTG
CTATCCGTTCCCTCGAAGAAGGAGGGAAGGTGCTGGTGATGGTGCAACCA
CTGGACATGAAGACCACGTTCCACATCGGTGGCCCCCCTAGGTGTATACT
CTCGCCGTCCTCTGCATCCTCGTAACCGTTCACCGACAACGCCAGGACTA
CGGTAACTCATCCTCCCTCCCATCATCGTCCTCAGACGAAGCCTATCTCG
TAGCATTCGAAAAAGACCTATTACGTGCTGCCAAGGCCAAGGAAGTGCAA
CATAAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGAGAACA
GGAAAAACAGAATCGAAGAGCAGAGGCCAAGAAGGGGGAGGAAGGCGGGA
CGGAGGAAACGAAGGAGGAAAGAGGGAAGATCGAAGGACCTAACTTCAGT
GGGGTATGGAAATCGATTCCAGGCAAGAATTCCAATTACGACGAGTTTCT
GACAGTCCAAGGGGTGCCTTATCTCAAGCGGAAGATTGCAAACAGCACAG
TGGTCACCCACACGATTCAACAGGATGGGGATATATTGAAATTGGAGATG
GAAGCCACTGCCACCATCTCCCTTCTTTTGGCGCACCAATCCGGCCTTCT
CAACACTGCCGTCGATGCCATCGTCCCAAAACAGTGCGTCAAGAATCTAA
AGGACGGGAAGGAGACACATGCGGAACAGACCTTCGAGAAGGCCGAATAA
CACCTCCTACATCGGCAAGACTCTTTTCGAAGACACCATGACCTACAACG
ATGAAGGGGCTTTGGTTTTAGTTAAAAAAAACGAGAAAGATGGGATGGAA
ATAACTGCTATCCGTTCCCTCGAAGAAGGAGGGAAGGTGCTGGTGATGGT
GCAACCACTGGACATGAAGACCACGTTCCACATCGGTGGCCCCCCTAGGT
GTATACTCTCGCCGTCCTCTGCATCCTCGTAACCGTTCACCGACAACGCC
AGGACTACGGTAACTCATCCTCCCTCCCATCATCGTCCTCAGACGAAGCC
TATCTCGTAGCATTCGAAAAAGACCTATTACGTGCTGCCAAGGCCAAGGA
AGTGCAACATAAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
GAGAACAGGAAAAACAGAATCGAAGAGCAGAGGCCAAGAAGGGGGAGGAA
GGCGGGACGGAGGAAACGAAGGAGGAAAGAGGGAAGATCGAAGGACCTAA
CTTCAGTGGGGTATGGAAATCGATTCCAGGCAAGAATTCCAATTACGACG
AGTTTCTGACAGTCCAAGGGGTGCCTTATCTCAAGCGGAAGATTGCAAAC
AGCACAGTGGTCACCCACACGATTCAACAGGATGGGGATATATTGAAATT
GGAGATGGAAGCCACTGCCACCATCTCCCTTCTTTTGGCGCACCAATCCG
GCCTTCTCAACACTGCCGTCGATGCCATCGTCCCA back to top
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