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Properties
| Property Name | Value |
|---|
| TranscriptId | 314067 |
| Track | FilteredModels2 |
| ProteinId | 313981 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_45 | supercontig | scaffold_45:15401..17777 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9843 ID=mRNA_9843|Name=jgi.p|Nanoce1779_2|313981|organism=Nannochloropsis oceanica|type=mRNA|length=1830bp
CAGGAGGGACAAGCAGGCAGCACTGGCGACCAAAAATAAGAGGAGACACA
AATGGAAAGAGTGGTGAGCATTGCCAGGTAGCACATCAGCCGGAGGAAGG
TTTCATATCAAGGGGAGAAAAAAAAACACATACTACATCCCGTCGGAGGA
TGATGGGGAATATTTTGGAGCAACGACACGTACCCTGCCCGATCAACATA
TAATAGTTTCCCCGGAGGCTTCGGTTGTGTGGCCCTGCGTCCCGCCTCCT
CATACATACAACATATAATAGTTTCCCCGGAGGCTTCGGTTGTGTGGCCC
TGCGTCCCGCCTCCTTATACATACGACAGACCATCTATAAAAGGCATTGG
GACTGTCCTAGATGACCAGCGAGGGCTTTTCTAGGGCCATCCTACTGTCC
TACTTTACCGTGACATCCATCACACCACAAGCACACAGCGCCTTAATCAT
GCCTAGGCGTCCACGGCCGTTGCCCTCCCTTCTTCTCCTCCTCATCCTCC
TCTTCCTCCTCCCCCACTCCACGCTCCCTTCCTCCCAACCTCTTCCCCTA
TCTGCCGCCTCCTCCTCTTCGAGCCCTCCTCCTCCTCCACCATCACCATC
TGCTTACGTGGATTTGCTGCACGACCCATGTTTTGTCACGAGCAACGACA
TTCGAGATTTCAACATGTATGGTTTCAAACGCTGGCATAACGGAAGCACT
TTGGGAGCCTGGACAGTCACCTCTGGTGCCGTGGATCAATACCTTGCCCC
CGCTGTTGCCCAGAGCGCCGCCGCCAACCCCAGAGGGTACCCCCCCCTCT
GGCCCCTTCCTTCCCCCCTCCCTCCCTCCTGCACCTCACTCTTGGACATC
AACAGTGATGACGCCGCCAGTATTTCACAAGCGGTGAGAGTGCGGGAGGG
AAGGAGGTACCGGCTGAGTTTTTTGTTTGCCGGGGATGCCCTGTCTTTGC
ATTTGCCCTCTTCAGGAGTAGGAGGAGGAGGAGGAGGAGGAGGGGATATA
AGGAGTGGTGGCGCAACTGCAGGAACACCATCAGGAGAAGGAGCAAAAGC
AGGAGTGACACCAGGCCCTCCACCTTCCCACCAAGGATTGCCGCCGTTCA
AATCGTTTTCGGTGTCGTGGCAAGGGACGGAGGTCGGGCAGGTCTTCATT
AATACGCTGGACCCCAGCACGGCGGGCAACGGTTGGGATTCTGCGAGCTA
CGACGTGACTGCTCTTTCGGAGGAAGAACGACTCAGTCTCGAGGCCATAG
AAAGGAAGAAATTTGGCAATAAGGGAGGTAAGAAGCACGAGAAGAAGAAG
GAGAAGAAGAAGGAGAAGAAGGAGGAGGAGAAGGAAATTGAGAAGGCGGC
AAAGGAGCGTGAGAACCTGATAATGCAGGCACGAGAGGAGGGTGAGAAGG
AGAAATGGCTCACAGCCATCATCAACATCACCTCCACCACTAAGGGAAAA
AGCAGCACCAAAGGGAGGAGGGGTACGGAAGCACGGGCTCTCGAAGAGAT
GGTGGCGGAGGAAGAGGAAAAGGAGACGGTGGAGAAAGAGAGATTGATGT
ATAGGAAGGGAGGGAGGCATTGAGTGATATAAGACGGGTAATCGGGGAAT
TTTGATGAGCCGGGAGAAATAACAAGGAGAAGTCGCCAAAACCAAATGGC
AGATGCGATAGATGAGTGACAGAATGATCAGAAGCTCAAATTAAACGGAA
AACAAAATAAATGTGGTGTTGACCCACGAATGTCAAAATACAAACATAGA
AGAAGAGGAATTACGAAAATGAAAAAATAAGAAGAATCTGAAAATAAAAT
AAGAGTGAAGGCTAAGCTTGCCAAATTATT back to topprotein sequence of jgi.p|Nanoce1779_2|313981 >mRNA_9843-protein ID=mRNA_9843-protein|Name=jgi.p|Nanoce1779_2|313981|organism=Nannochloropsis oceanica|type=polypeptide|length=404bp
MTSEGFSRAILLSYFTVTSITPQAHSALIMPRRPRPLPSLLLLLILLFLL
PHSTLPSSQPLPLSAASSSSSPPPPPPSPSAYVDLLHDPCFVTSNDIRDF
NMYGFKRWHNGSTLGAWTVTSGAVDQYLAPAVAQSAAANPRGYPPLWPLP
SPLPPSCTSLLDINSDDAASISQAVRVREGRRYRLSFLFAGDALSLHLPS
SGVGGGGGGGGDIRSGGATAGTPSGEGAKAGVTPGPPPSHQGLPPFKSFS
VSWQGTEVGQVFINTLDPSTAGNGWDSASYDVTALSEEERLSLEAIERKK
FGNKGGKKHEKKKEKKKEKKEEEKEIEKAAKERENLIMQAREEGEKEKWL
TAIINITSTTKGKSSTKGRRGTEARALEEMVAEEEEKETVEKERLMYRKG
GRH* back to topmRNA from alignment at scaffold_45:15401..17777- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9843 ID=mRNA_9843|Name=jgi.p|Nanoce1779_2|313981|organism=Nannochloropsis oceanica|type=mRNA|length=2377bp|location=Sequence derived from alignment at scaffold_45:15401..17777- (Nannochloropsis oceanica)
CAGGAGGGACAAGCAGGCAGCACTGGCGACCAAAAATAAGAGGAGACACA
AATGGAAAGAGTGGTGAGCATTGCCAGGTAGCACATCAGCCGGAGGAAGG
TTTCATATCAAGGGGAGAAAAAAAAACACATACTACATCCCGTCGGAGGA
TGATGGGGAATATTTTGGAGCAACGACACGTACCCTGCCCGATCAACATA
TAATAGTTTCCCCGGAGGCTTCGGTTGTGTGGCCCTGCGTCCCGCCTCCT
CATACATACAACATATAATAGTTTCCCCGGAGGCTTCGGTTGTGTGGCCC
TGCGTCCCGCCTCCTTATACATACGACAGACCATCTATAAAAGGCATTGG
GACTGTCCTAGATGACCAGCGAGGGCTTTTCTAGGGCCATCCTACTGTCC
TACTTTACCGTGACATCCATCACACCACAAGCACACAGCGCCTTAATCAT
GCCTAGGCGTCCACGGCCGTTGCCCTCCCTTCTTCTCCTCCTCATCCTCC
TCTTCCTCCTCCCCCACTCCACGCTCCCTTCCTCCCAACCTCTTCCCCTA
TCTGCCGCCTCCTCCTCTTCGAGCCCTCCTCCTCCTCCACCATCACCATC
TGCTTACGTGGATTTGCTGCACGACCCATGTTTTGTCACGAGCAACGACA
TTCGAGATTTCAACATGTATGGTTTCAAACGCTGGCATAACGGAAGCACT
TTGGGAGCCTGGACAGGTAGTTCCTCCCTCCCTCTTTCCCTCCCACCCTC
TCTCTCTCCTCCTTTCTTCCCAAATCAGGTCCTCACCATTATTCTTACCA
CCGCACACCTACCAGTCACCTCTGGTGCCGTGGATCAATACCTTGCCCCC
GCTGTTGCCCAGAGCGCCGCCGCCAACCCCAGAGGGTACCCCCCCCTCTG
GCCCCTTCCTTCCCCCCTCCCTCCCTCCTGCACCTCACTCTTGGACATCA
ACAGTGATGACGCCGCCAGTATTTCACAAGCGGTGAGAGTGCGGGAGGGA
AGGAGGTACCGGCTGAGTTTTTTGTTTGCCGGGGATGCCCTGTCTTTGCA
TTTGCCCTCTTCAGGAGTAGGAGGAGGAGGAGGAGGAGGAGGGGATATAA
GGAGTGGTGGCGCAACTGCAGGAACACCATCAGGAGAAGGAGCAAAAGCA
GGAGTGACACCAGGCCCTCCACCTTCCCACCAAGGATTGCCGCCGTTCAA
ATCGTTTTCGGTGTCGTGGCAAGGGACGGAGGTCGGGCAGGTCTTCATTA
ATACGCTGGACCCCAGCACGGCGGGCAACGGTTGGGATTCTGCGAGCTAC
GACGTGACTGCTCTTTCGGAGGAAGAACGACTCAGTCTCGAGGCCATAGA
AAGGAAGAAATTTGGCAATAAGGGAGGTAAGAAGCACGAGAAGAAGAAGG
AGAAGAAGAAGGAGAAGAAGGAGGAGGAGAAGGAAATTGAGAAGGCGGCA
AAGGAGCGTGAGAACCTGATAATGCAGGCACGAGAGGAGGGTGAGAAGGA
GAAATGGCTCACAGCCATCATCAACATCACCTCCACCACTAAGGGAAAAA
GCAGTTTGTTCCTCACCGACGTCCATCTGTACGACCTCTCCACCCCCCTC
CCTACTTCCCTCCCTTCCTCCTCCCCTTCCTTTTCCACCTCTCGTATAAT
ATTTCTGGTGGTCGCGCTCGGCATGGGGTTGACTCTTTTTTGTTTGTTAG
TGAATGTGTTGGCGTCGGCCAAGGGGGGCTGGCGCTGGGACAAGCTCTCG
CAGTGGCACAGAATGGAGGAGGAGGAGGAGGAGGAGGAGATAGAGGAGGA
TGGGGGGGAAGGACTGAGAGGCTTGTATTATTATCCATCGTTGGAAATGC
CGAGGAGGACGATGGAGGAAGGGGAGGAGGTAAAGGGAAAAGGAGGGTGG
GAGGACAGGAGGGACGATGAGGAGGAGGTACTTTTTCAGAGGGAGCGGGG
ACGAGGAAGGAGGGAGGGACGGAGAGAGGGGAATGGGCTGCCGTCGGTGA
GGCACCAAAGGGAGGAGGGGTACGGAAGCACGGGCTCTCGAAGAGATGGT
GGCGGAGGAAGAGGAAAAGGAGACGGTGGAGAAAGAGAGATTGATGTATA
GGAAGGGAGGGAGGCATTGAGTGATATAAGACGGGTAATCGGGGAATTTT
GATGAGCCGGGAGAAATAACAAGGAGAAGTCGCCAAAACCAAATGGCAGA
TGCGATAGATGAGTGACAGAATGATCAGAAGCTCAAATTAAACGGAAAAC
AAAATAAATGTGGTGTTGACCCACGAATGTCAAAATACAAACATAGAAGA
AGAGGAATTACGAAAATGAAAAAATAAGAAGAATCTGAAAATAAAATAAG
AGTGAAGGCTAAGCTTGCCAAATTATT back to topCoding sequence (CDS) from alignment at scaffold_45:15401..17777- >mRNA_9843 ID=mRNA_9843|Name=jgi.p|Nanoce1779_2|313981|organism=Nannochloropsis oceanica|type=CDS|length=3636bp|location=Sequence derived from alignment at scaffold_45:15401..17777- (Nannochloropsis oceanica)
GCACCAAAGGGAGGAGGGGTACGGAAGCACGGGCTCTCGAAGAGATGGTG
GCGGAGGAAGAGGAAAAGGAGACGGTGGAGAAAGAGAGATTGATGTATAG
GAAGGGAGGGAGGCATTGATCACCTCTGGTGCCGTGGATCAATACCTTGC
CCCCGCTGTTGCCCAGAGCGCCGCCGCCAACCCCAGAGGGTACCCCCCCC
TCTGGCCCCTTCCTTCCCCCCTCCCTCCCTCCTGCACCTCACTCTTGGAC
ATCAACAGTGATGACGCCGCCAGTATTTCACAAGCGGTGAGAGTGCGGGA
GGGAAGGAGGTACCGGCTGAGTTTTTTGTTTGCCGGGGATGCCCTGTCTT
TGCATTTGCCCTCTTCAGGAGTAGGAGGAGGAGGAGGAGGAGGAGGGGAT
ATAAGGAGTGGTGGCGCAACTGCAGGAACACCATCAGGAGAAGGAGCAAA
AGCAGGAGTGACACCAGGCCCTCCACCTTCCCACCAAGGATTGCCGCCGT
TCAAATCGTTTTCGGTGTCGTGGCAAGGGACGGAGGTCGGGCAGGTCTTC
ATTAATACGCTGGACCCCAGCACGGCGGGCAACGGTTGGGATTCTGCGAG
CTACGACGTGACTGCTCTTTCGGAGGAAGAACGACTCAGTCTCGAGGCCA
TAGAAAGGAAGAAATTTGGCAATAAGGGAGGTAAGAAGCACGAGAAGAAG
AAGGAGAAGAAGAAGGAGAAGAAGGAGGAGGAGAAGGAAATTGAGAAGGC
GGCAAAGGAGCGTGAGAACCTGATAATGCAGGCACGAGAGGAGGGTGAGA
AGGAGAAATGGCTCACAGCCATCATCAACATCACCTCCACCACTAAGGGA
AAAAGCAATGACCAGCGAGGGCTTTTCTAGGGCCATCCTACTGTCCTACT
TTACCGTGACATCCATCACACCACAAGCACACAGCGCCTTAATCATGCCT
AGGCGTCCACGGCCGTTGCCCTCCCTTCTTCTCCTCCTCATCCTCCTCTT
CCTCCTCCCCCACTCCACGCTCCCTTCCTCCCAACCTCTTCCCCTATCTG
CCGCCTCCTCCTCTTCGAGCCCTCCTCCTCCTCCACCATCACCATCTGCT
TACGTGGATTTGCTGCACGACCCATGTTTTGTCACGAGCAACGACATTCG
AGATTTCAACATGTATGGTTTCAAACGCTGGCATAACGGAAGCACTTTGG
GAGCCTGGACAGGCACCAAAGGGAGGAGGGGTACGGAAGCACGGGCTCTC
GAAGAGATGGTGGCGGAGGAAGAGGAAAAGGAGACGGTGGAGAAAGAGAG
ATTGATGTATAGGAAGGGAGGGAGGCATTGATCACCTCTGGTGCCGTGGA
TCAATACCTTGCCCCCGCTGTTGCCCAGAGCGCCGCCGCCAACCCCAGAG
GGTACCCCCCCCTCTGGCCCCTTCCTTCCCCCCTCCCTCCCTCCTGCACC
TCACTCTTGGACATCAACAGTGATGACGCCGCCAGTATTTCACAAGCGGT
GAGAGTGCGGGAGGGAAGGAGGTACCGGCTGAGTTTTTTGTTTGCCGGGG
ATGCCCTGTCTTTGCATTTGCCCTCTTCAGGAGTAGGAGGAGGAGGAGGA
GGAGGAGGGGATATAAGGAGTGGTGGCGCAACTGCAGGAACACCATCAGG
AGAAGGAGCAAAAGCAGGAGTGACACCAGGCCCTCCACCTTCCCACCAAG
GATTGCCGCCGTTCAAATCGTTTTCGGTGTCGTGGCAAGGGACGGAGGTC
GGGCAGGTCTTCATTAATACGCTGGACCCCAGCACGGCGGGCAACGGTTG
GGATTCTGCGAGCTACGACGTGACTGCTCTTTCGGAGGAAGAACGACTCA
GTCTCGAGGCCATAGAAAGGAAGAAATTTGGCAATAAGGGAGGTAAGAAG
CACGAGAAGAAGAAGGAGAAGAAGAAGGAGAAGAAGGAGGAGGAGAAGGA
AATTGAGAAGGCGGCAAAGGAGCGTGAGAACCTGATAATGCAGGCACGAG
AGGAGGGTGAGAAGGAGAAATGGCTCACAGCCATCATCAACATCACCTCC
ACCACTAAGGGAAAAAGCAATGACCAGCGAGGGCTTTTCTAGGGCCATCC
TACTGTCCTACTTTACCGTGACATCCATCACACCACAAGCACACAGCGCC
TTAATCATGCCTAGGCGTCCACGGCCGTTGCCCTCCCTTCTTCTCCTCCT
CATCCTCCTCTTCCTCCTCCCCCACTCCACGCTCCCTTCCTCCCAACCTC
TTCCCCTATCTGCCGCCTCCTCCTCTTCGAGCCCTCCTCCTCCTCCACCA
TCACCATCTGCTTACGTGGATTTGCTGCACGACCCATGTTTTGTCACGAG
CAACGACATTCGAGATTTCAACATGTATGGTTTCAAACGCTGGCATAACG
GAAGCACTTTGGGAGCCTGGACAGGCACCAAAGGGAGGAGGGGTACGGAA
GCACGGGCTCTCGAAGAGATGGTGGCGGAGGAAGAGGAAAAGGAGACGGT
GGAGAAAGAGAGATTGATGTATAGGAAGGGAGGGAGGCATTGATCACCTC
TGGTGCCGTGGATCAATACCTTGCCCCCGCTGTTGCCCAGAGCGCCGCCG
CCAACCCCAGAGGGTACCCCCCCCTCTGGCCCCTTCCTTCCCCCCTCCCT
CCCTCCTGCACCTCACTCTTGGACATCAACAGTGATGACGCCGCCAGTAT
TTCACAAGCGGTGAGAGTGCGGGAGGGAAGGAGGTACCGGCTGAGTTTTT
TGTTTGCCGGGGATGCCCTGTCTTTGCATTTGCCCTCTTCAGGAGTAGGA
GGAGGAGGAGGAGGAGGAGGGGATATAAGGAGTGGTGGCGCAACTGCAGG
AACACCATCAGGAGAAGGAGCAAAAGCAGGAGTGACACCAGGCCCTCCAC
CTTCCCACCAAGGATTGCCGCCGTTCAAATCGTTTTCGGTGTCGTGGCAA
GGGACGGAGGTCGGGCAGGTCTTCATTAATACGCTGGACCCCAGCACGGC
GGGCAACGGTTGGGATTCTGCGAGCTACGACGTGACTGCTCTTTCGGAGG
AAGAACGACTCAGTCTCGAGGCCATAGAAAGGAAGAAATTTGGCAATAAG
GGAGGTAAGAAGCACGAGAAGAAGAAGGAGAAGAAGAAGGAGAAGAAGGA
GGAGGAGAAGGAAATTGAGAAGGCGGCAAAGGAGCGTGAGAACCTGATAA
TGCAGGCACGAGAGGAGGGTGAGAAGGAGAAATGGCTCACAGCCATCATC
AACATCACCTCCACCACTAAGGGAAAAAGCAATGACCAGCGAGGGCTTTT
CTAGGGCCATCCTACTGTCCTACTTTACCGTGACATCCATCACACCACAA
GCACACAGCGCCTTAATCATGCCTAGGCGTCCACGGCCGTTGCCCTCCCT
TCTTCTCCTCCTCATCCTCCTCTTCCTCCTCCCCCACTCCACGCTCCCTT
CCTCCCAACCTCTTCCCCTATCTGCCGCCTCCTCCTCTTCGAGCCCTCCT
CCTCCTCCACCATCACCATCTGCTTACGTGGATTTGCTGCACGACCCATG
TTTTGTCACGAGCAACGACATTCGAGATTTCAACATGTATGGTTTCAAAC
GCTGGCATAACGGAAGCACTTTGGGAGCCTGGACAG back to top
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