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Properties
| Property Name | Value |
|---|
| TranscriptId | 574985 |
| Track | FilteredModels2 |
| ProteinId | 574899 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:929265..932275 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_984 ID=mRNA_984|Name=jgi.p|Nanoce1779_2|574899|organism=Nannochloropsis oceanica|type=mRNA|length=2709bp
CAGGCTATGGAGAGCTTCGAGGAGGCCCTGGTCGGCTGGCGGGGCCTTCT
GCCGGGCGAGACGACTTTGCTTACGGACGAAGATCCTCTGGCGGACGGGC
ATGCCTTGCTCTTGCACTTGCTGGCCCAGGCATTGAGACATGGCACGCGC
GTGTATTGCTTTGCGGCGGCGGCGCCTCAGTCGCATTACACGGCGGTCCT
TAGGAAGCTAGGCGTGGACAAGGCCAAGCTGGATGAGGAAGGTGACATGT
TTGTCTACGTCCCTTTGCTCCCAGCACGACTACCACCATCAGACGGCGCT
GGGCAGCCTGCTTTAGCAATGGCGCCTTTGCTGAGAAATTTGGCGGAATA
CTTACGGCAACAACAACAAATACAGCAGCATGTCGTGGTGGTTATTGACG
ACCTGAGCTTGGTGGCGGGCGTGTATGGGGCGCGGGTGGCGGTGGAGCTT
GTACAGGTCTTCCGCGGTGCAATCATGCAATGCCAGCCATCCATCGCCGC
TCCTATTAGACCATCATTGCTAGTGCGTGTGCTTGAGGGGGAAGGTGATG
ACGACGACGAGTCTGACATTGAGGACGAATATGGTGACGCACATTCTATA
AGCTTAATTGATTTGCTGTTGCGGACGGCGGACGCCTTAGTGGAAGTCCG
CCCGTTGACCTCAGGATACAGTCGAGACGTACATGGTCTCATTACAGTGC
GGCCGTGGCCAGGGGCGCGACCGGAGCTGATCAATTTCAAATTGGGGGAG
GGCGGTCTTAAGTGTGGACGGTTGACGGCGTCGTCCGCCGTAGTTGGAAT
GGGGAGAGCTTCTCCCTAATCGTCAGAATGTGAAGGCACCACACGACTTG
CTCTGCTTTTGTGGAAGACATACCTGAACATGGGAATTGTCCCTGCCATG
CTATTTCAACTTAAGTGGAAAAGGTGGTGATGTCTCGTGATAGCGGGAGG
AAGCTCCAGTTATGTGTCAGAGTTTACAAAGAGAAATGTGAACCCTCCCC
AAGAATATATCGAACGGGAGGAAACAAAAAATAAAGCATATCATTGTACT
GGCGCTTGCATTAATCATTGATTCTTCCACAATTGTTCAGCACTCACGCT
TGCCGCTGCTGCTGGATGACAATGAGAAACGACAGCGCAGAAATGAGCGG
ACTTGCGGTGCATCCCCCCCTTGAGCTTTCTGTAGCATGCCCTTTATGTT
CTATGCACATTTTCTTTGGACCTTGGACCTTCCCATATGAAAAAATGAGG
TGAAAAGCGCTTGCAGCAAAGAGGCTTGGACGGGGATAAGCCCCTGTGAA
TGATAGTAATGAAGTATTTTCGTCTCGTTTTATGGGTTCTCCTTGACTGA
CGGTCGCAAGCGCGCATTTGGTTCACTGGCCTTCCGCTATCGTCTCGCTG
TCTTTTCCATTTATGACTAGGACTTGTGAATTCTCTTTCAATATTTTATC
CGTGGAAGCACACGATCATGCTACCGGACAGGATTCGTTCATACAAACAC
ATGCTGGCGACCCTTCACACACGGAGGGTGATATTTCTTTGGGGCTTCCA
AACTGGTATTTATTTTCCTTCTCTATCTATAACGTTCGAAGGTCTCACAG
ACAGAAGATGACGAACAGAAGGGCAATTGTAATTTATTTGATCTTGACAT
TTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGT
CTGTCTTTTGTCTCTCCTCCTTCCTTTAGCTTCTCTCTCGTCTCCCACGT
ACTACAATCTCTTCCCCCTACCATGTGTACTCTCTTCTCCTAATTTCAGA
CAAGTATCACAGTTGTTGCGCACAAAGAAGGCAGATACAATGCATACTTC
AGGAGGAGCAGCTCCACCATCTCTCTCATTCATAGTATCTCGTTCTGCCT
GCTGCTGGTGCTGTTACTGATTGTGGCTAATCGATTGATCGACTGACACA
CTTGGTCCTTTGAGTCTGGTAAAAGAGAATAAAATGCTTCATCTACTCTG
TTACGGTCAGGGGAATGGGAGAAAGGTAGGGGCGAGGGAGAGTGGGCAAT
GCATAGGAGACGTCATGGTGCTGGACACACACGTATTGACATAAAACACA
ATCGGACGCGCCCTGAACATGATAATACAAATCACTCGTCATGTCCTGCT
GGTCATGTGCGGGCGCCATCAGCTGATTGATAGCTCCATCATGCTGTTGT
TGGAGAGAAAGAGCTCTCAACTGCCGCTACTACCGGCTTACTCATCACCT
CACTGCATAAACCTCCGTCCCATCCCCCATGCCCTGGACCCCATTGCATG
AGGATATCGTCCCCTTCGCTCGCGCACTCGCAGAAGGATCCACAATCGCC
CCACGAGCCACAGCTAAGGAGGACGCAGTGGGCGGCCATTCAGTCATGAG
TGGTAGGTAGGTCGTCTGACTCACTCCTTCTCCAGGTGCCACCGTCGTAA
CTACGTTAGAAGGTGGGTGTTGTGGGTTATGCGGCGGGCAGCTACTGCTT
CTGCTGCACAAGTCGTAGTTGTTTTTGCCGTCGGCAGGAAGAGAGGCAGT
TTGGCGGGACATGGATACGATATCCAACGGGGCAGGGAGGAAAGAAGAGG
GGAGGTATGGAGGGGAGGAGGGAGTGGAGGGAGGAAGGCCGAGCAGATTT
TGTTCCTCACGGGAGAATGTTTTTCGTTGGTGTGGTTGCTGCTGCTGCTG
CTGCTGCTG back to topprotein sequence of jgi.p|Nanoce1779_2|574899 >mRNA_984-protein ID=mRNA_984-protein|Name=jgi.p|Nanoce1779_2|574899|organism=Nannochloropsis oceanica|type=polypeptide|length=271bp
MESFEEALVGWRGLLPGETTLLTDEDPLADGHALLLHLLAQALRHGTRVY
CFAAAAPQSHYTAVLRKLGVDKAKLDEEGDMFVYVPLLPARLPPSDGAGQ
PALAMAPLLRNLAEYLRQQQQIQQHVVVVIDDLSLVAGVYGARVAVELVQ
VFRGAIMQCQPSIAAPIRPSLLVRVLEGEGDDDDESDIEDEYGDAHSISL
IDLLLRTADALVEVRPLTSGYSRDVHGLITVRPWPGARPELINFKLGEGG
LKCGRLTASSAVVGMGRASP* back to topmRNA from alignment at scaffold_2:929265..932275- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_984 ID=mRNA_984|Name=jgi.p|Nanoce1779_2|574899|organism=Nannochloropsis oceanica|type=mRNA|length=3011bp|location=Sequence derived from alignment at scaffold_2:929265..932275- (Nannochloropsis oceanica)
CAGGCTATGGAGAGCTTCGAGGAGGCCCTGGTCGGCTGGCGGGGCCTTCT
GCCGGGCGAGACGACTTTGCTTACGGACGAAGATCCTCTGGCGGACGGGC
ATGCCTTGCTCTTGCACTTGCTGGCCCAGGCATTGAGACATGGCACGCGC
GTGTATTGCTTTGCGGCGGCGGCGCCTCAGTCGCATTACACGGCGGTCCT
TAGGAAGCTAGGCGTGGACAAGGCCAAGCTGGATGAGGAAGGTGACATGT
TTGTCTACGTCCCTTTGCTCCCAGCACGACTACCACCATCAGACGGCGCT
GGGCAGCCTGCTTTAGCAATGGCGCCTTTGCTGAGAAATTTGGCGGAATA
CTTACGGCAACAACAACAAATACAGCAGCATGTCGTGGTGGTTATTGACG
ACCTGAGCTTGGTGGCGGGCGTGTATGGGGCGCGGGTGGCGGTGGAGCTT
GTACAGGTCTTCCGCGGTGCAATCATGCAATGCCAGCCATCCATCGCCGC
TCCTATTAGACCATCATTGCTAGTGCGTGTGCTTGAGGGGGAAGGTGATG
ACGACGACGAGTCTGACATTGAGGACGAATATGGTGACGCACATTCTATA
AGCTTAATTGATTTGCTGTTGCGGACGGCGGACGCCTTAGTGGAAGTCCG
CCCGTTGACCTCAGGATACAGTCGAGACGTACATGGTCTCATTACAGTGC
GGCCGTGGCCAGGGGCGCGACCGGAGCTGATCAATTTCAAATTGGGGGAG
GGCGGTCTTAAGTGTGGACGGTTGACGGCGTCGTCCGCCGTAGTTGGAAT
GGGGAGAGCTTCTCCCTAATCGTCAGAATGTGAAGGGTAAGTCCCAGTGG
AGATGGGATAGATCATGACGTGTTTGGGGGCTGTAGTGATGTTCTCAAAA
ATGGTAATTTACGAGGTAGTCAATTCCTTGGATGTGAATTGCATGACCAC
AACTTTTTGCTGAACAGCTCCAAAACAAAAAATCAATCATTATTTGGGTC
TTATCTGTCTTAATGTGAACTGAGGCCTCCTTAATTGCGCATTCCACTCA
TATCTCGTTTTATACATCTTAAACTTCTTAACTTACTAATTCAGTGCTGC
AAAAATTCCGGTTTATAATTTCTCTGCCCACAACACAGCACCACACGACT
TGCTCTGCTTTTGTGGAAGACATACCTGAACATGGGAATTGTCCCTGCCA
TGCTATTTCAACTTAAGTGGAAAAGGTGGTGATGTCTCGTGATAGCGGGA
GGAAGCTCCAGTTATGTGTCAGAGTTTACAAAGAGAAATGTGAACCCTCC
CCAAGAATATATCGAACGGGAGGAAACAAAAAATAAAGCATATCATTGTA
CTGGCGCTTGCATTAATCATTGATTCTTCCACAATTGTTCAGCACTCACG
CTTGCCGCTGCTGCTGGATGACAATGAGAAACGACAGCGCAGAAATGAGC
GGACTTGCGGTGCATCCCCCCCTTGAGCTTTCTGTAGCATGCCCTTTATG
TTCTATGCACATTTTCTTTGGACCTTGGACCTTCCCATATGAAAAAATGA
GGTGAAAAGCGCTTGCAGCAAAGAGGCTTGGACGGGGATAAGCCCCTGTG
AATGATAGTAATGAAGTATTTTCGTCTCGTTTTATGGGTTCTCCTTGACT
GACGGTCGCAAGCGCGCATTTGGTTCACTGGCCTTCCGCTATCGTCTCGC
TGTCTTTTCCATTTATGACTAGGACTTGTGAATTCTCTTTCAATATTTTA
TCCGTGGAAGCACACGATCATGCTACCGGACAGGATTCGTTCATACAAAC
ACATGCTGGCGACCCTTCACACACGGAGGGTGATATTTCTTTGGGGCTTC
CAAACTGGTATTTATTTTCCTTCTCTATCTATAACGTTCGAAGGTCTCAC
AGACAGAAGATGACGAACAGAAGGGCAATTGTAATTTATTTGATCTTGAC
ATTTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
GTCTGTCTTTTGTCTCTCCTCCTTCCTTTAGCTTCTCTCTCGTCTCCCAC
GTACTACAATCTCTTCCCCCTACCATGTGTACTCTCTTCTCCTAATTTCA
GACAAGTATCACAGTTGTTGCGCACAAAGAAGGCAGATACAATGCATACT
TCAGGAGGAGCAGCTCCACCATCTCTCTCATTCATAGTATCTCGTTCTGC
CTGCTGCTGGTGCTGTTACTGATTGTGGCTAATCGATTGATCGACTGACA
CACTTGGTCCTTTGAGTCTGGTAAAAGAGAATAAAATGCTTCATCTACTC
TGTTACGGTCAGGGGAATGGGAGAAAGGTAGGGGCGAGGGAGAGTGGGCA
ATGCATAGGAGACGTCATGGTGCTGGACACACACGTATTGACATAAAACA
CAATCGGACGCGCCCTGAACATGATAATACAAATCACTCGTCATGTCCTG
CTGGTCATGTGCGGGCGCCATCAGCTGATTGATAGCTCCATCATGCTGTT
GTTGGAGAGAAAGAGCTCTCAACTGCCGCTACTACCGGCTTACTCATCAC
CTCACTGCATAAACCTCCGTCCCATCCCCCATGCCCTGGACCCCATTGCA
TGAGGATATCGTCCCCTTCGCTCGCGCACTCGCAGAAGGATCCACAATCG
CCCCACGAGCCACAGCTAAGGAGGACGCAGTGGGCGGCCATTCAGTCATG
AGTGGTAGGTAGGTCGTCTGACTCACTCCTTCTCCAGGTGCCACCGTCGT
AACTACGTTAGAAGGTGGGTGTTGTGGGTTATGCGGCGGGCAGCTACTGC
TTCTGCTGCACAAGTCGTAGTTGTTTTTGCCGTCGGCAGGAAGAGAGGCA
GTTTGGCGGGACATGGATACGATATCCAACGGGGCAGGGAGGAAAGAAGA
GGGGAGGTATGGAGGGGAGGAGGGAGTGGAGGGAGGAAGGCCGAGCAGAT
TTTGTTCCTCACGGGAGAATGTTTTTCGTTGGTGTGGTTGCTGCTGCTGC
TGCTGCTGCTG back to topCoding sequence (CDS) from alignment at scaffold_2:929265..932275- >mRNA_984 ID=mRNA_984|Name=jgi.p|Nanoce1779_2|574899|organism=Nannochloropsis oceanica|type=CDS|length=813bp|location=Sequence derived from alignment at scaffold_2:929265..932275- (Nannochloropsis oceanica)
ATGGAGAGCTTCGAGGAGGCCCTGGTCGGCTGGCGGGGCCTTCTGCCGGG
CGAGACGACTTTGCTTACGGACGAAGATCCTCTGGCGGACGGGCATGCCT
TGCTCTTGCACTTGCTGGCCCAGGCATTGAGACATGGCACGCGCGTGTAT
TGCTTTGCGGCGGCGGCGCCTCAGTCGCATTACACGGCGGTCCTTAGGAA
GCTAGGCGTGGACAAGGCCAAGCTGGATGAGGAAGGTGACATGTTTGTCT
ACGTCCCTTTGCTCCCAGCACGACTACCACCATCAGACGGCGCTGGGCAG
CCTGCTTTAGCAATGGCGCCTTTGCTGAGAAATTTGGCGGAATACTTACG
GCAACAACAACAAATACAGCAGCATGTCGTGGTGGTTATTGACGACCTGA
GCTTGGTGGCGGGCGTGTATGGGGCGCGGGTGGCGGTGGAGCTTGTACAG
GTCTTCCGCGGTGCAATCATGCAATGCCAGCCATCCATCGCCGCTCCTAT
TAGACCATCATTGCTAGTGCGTGTGCTTGAGGGGGAAGGTGATGACGACG
ACGAGTCTGACATTGAGGACGAATATGGTGACGCACATTCTATAAGCTTA
ATTGATTTGCTGTTGCGGACGGCGGACGCCTTAGTGGAAGTCCGCCCGTT
GACCTCAGGATACAGTCGAGACGTACATGGTCTCATTACAGTGCGGCCGT
GGCCAGGGGCGCGACCGGAGCTGATCAATTTCAAATTGGGGGAGGGCGGT
CTTAAGTGTGGACGGTTGACGGCGTCGTCCGCCGTAGTTGGAATGGGGAG
AGCTTCTCCCTAA back to top
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