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Properties
| Property Name | Value |
|---|
| TranscriptId | 605741 |
| Track | FilteredModels2 |
| ProteinId | 605655 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_32 | supercontig | scaffold_32:232890..235072 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9833 ID=mRNA_9833|Name=jgi.p|Nanoce1779_2|605655|organism=Nannochloropsis oceanica|type=mRNA|length=756bp
CTTCTCCCTTGATCCCTATGAGCTCGCCGACCCCGTGGACTTATTGGCCA
AGCTCTCGGCCTCGGATTTTTATGCCAAAATCGAGGAAGTCAAGTGGTCT
GAGAAGGCCGAAGCCCTGCAGGCCGCCGCCCGCATCATCGGTGATGTGCC
CAAGCTCGTGCCTGTTGGAGACTACGGTGACTTCCTTCGCTCCCTCAAGC
CGCTCGTCAACCACAGTCATTTCCAGGTTTCGGGCGGTGCCATCCGCCTC
ATCGGTCTCCTTGCCTCCGGCCTTAGGGAAGCTTTCTCCCCCTACGCCTC
CTCCGCTTGGACCCTCGTCCTCCTCAGAGCCAAGGACAAGAAGGTCGCCA
CTCCCGCGGCGGAGGCTTTGGACAGTCTCTTCGGACACTCCCTCTCCCTG
CAGTCCGCCCTGCAAGAGATCGAGGCCTCCCTCGACGCCTCCAACAAGAA
GGCGGGCTCCATTCCCTACACTCGCGTCCTCGTCCTCGAATGGCTGGATC
GATGCCTTGCCCGTGTGCAGCCAGGAAGCAAGAAGAAGCTCCTCGACCTC
CCCTCTTCCGTCGCGGTGGCTCTGGCCAAATCCTGCTGTAGTAACATCCA
AGACTCCGACGCCAAGGTCCGGGAGGCAGGCTTCAAGGTCGCTTTCCGCC
TTTTAGCCCTGGGCAACGGCAAGAAGGAGGAACGTCACGCCATCATGGCC
ACCTTCGAGGTCCTCAAAACTTTCAACAAGCCACTCTTTGACCGGCTCGA
CAAGGG back to topprotein sequence of jgi.p|Nanoce1779_2|605655 >mRNA_9833-protein ID=mRNA_9833-protein|Name=jgi.p|Nanoce1779_2|605655|organism=Nannochloropsis oceanica|type=polypeptide|length=213bp
MSSPTPWTYWPSSRPRIFMPKSRKSSGLRRPKPCRPPPASSVMCPSSCLL
ETTVTSFAPSSRSSTTVISRFRAVPSASSVSLPPALGKLSPPTPPPLGPS
SSSEPRTRRSPLPRRRLWTVSSDTPSPCSPPCKRSRPPSTPPTRRRAPFP
TLASSSSNGWIDALPVCSQEARRSSSTSPLPSRWLWPNPAVVTSKTPTPR
SGRQASRSLSAF* back to topmRNA from alignment at scaffold_32:232890..235072- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9833 ID=mRNA_9833|Name=jgi.p|Nanoce1779_2|605655|organism=Nannochloropsis oceanica|type=mRNA|length=2183bp|location=Sequence derived from alignment at scaffold_32:232890..235072- (Nannochloropsis oceanica)
CTTCTCCCTTGATCCCTATGAGCTCGCCGACCCCGTGGACTTATTGGCCA
AGGTGCGTGGGTGCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCAG
GCATCTATGATTGTGTGCTGACCTAGGTATCCTCATCCCTCCTCCCTCCT
CCCCTCCCCCTTCTCCCCCCCCCTCCCGCCCATCCCCCCCCTCCCTCAGC
TCTCGGCCTCGGATTTTTATGCCAAAATCGAGGAAGTCAAGTGGTCTGAG
AAGGCCGAAGCCCTGCAGGTACGCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCGTCCTATCACTCACCCACCGGACGTACCTAAGCACGTTCCAAC
AGGAGACAACTATCCACCCTTCCCTCCTCCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCTTCCTTCCTTCCCTAGCTTTAGCCTGCGG
GAGACCAACACTCACCCGCAAGCCCTGATCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCCCCCTCCCTAGGCCGCCGCCCGCATCATCGGTGATGTGCC
CAAGCTCGTGCCTGTTGGAGACTACGGTGACTTCCTTCGCTCCCTCAAGC
CGCTCGTCAACCACAGTCATTTCCAGGTTCGTCCCTCCCTCCCTCCCTCC
CCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCGTCTACGTTTTCTCT
CTGGCCGTGTTCGTTCCAACTGCCATCCCCTTCACCCACCCTCCCTCTCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCGTCAGGTTT
CGGGCGGTGCCATCCGCCTCATCGGTCTCCTTGCCTCCGGCCTTAGGGAA
GCTTTCTCCCCCTACGCCTCCTCCGCTTGGACCCTCGTCCTCCTCAGAGC
CAAGTGCGTGCCTTCCCTCCCTCCCTTGCTCTCTCTGCCTCTGTCTATCC
CTCTCACTTGATCTCCATGGGATTCCCGTTTCCTAAACCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTACCTAGGGACAAGAAGGT
CGCCACTCCCGCGGCGGAGGCTTTGGACAGTCTCTTCGGACACTCCCTCT
CCCTGCAGTCCGCCCTGCAAGAGATCGAGGCACGTCCTCCCTCTCTTTCC
CTCCCTCCCTCCCTCTCTCTCCCTCCCTCCCGGCCTTGAACAAGAAGGCA
GGCCCTATTCCCTCCACTCACCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCAGGCCTCCCTCGACGCCTCCAACAAGAAGGCGGGCTCCATTCCCTAC
ACTCGCGTCCTCGTCCTCGAATGGCTGGATCGATGCCTTGCCCGTGTGCA
GCCAGGAAGCAAGGCAAGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCACTTTCATTCCTTCA
CACACCTCCTTCCCTTTCCCTCCTTCCCCCCCTTCAACCCACCCTCCCTT
CCTCCCTCTCTCAGAAGAAGCTCCTCGACCTCCCCTCTTCCGTCGCGGTG
GCTCTGGCCAAATCCTGCTGTAGTAACATCCAAGACTCCGACGCCAAGGT
GGGCCCCTCCCTCCCTCCCTCCCCCCCTCCCTCCCCCCCTCCCTCCCTCC
CTCCCCCCCTCCCTCCCTCCCTCCCCCCTCCCTCCCTCCCTCCCCCCCTC
CCTCCCCCTCCCTTCCCCCCTCCCTTCCTCCCTCCCACCCTCTCTCCCTC
CCTCCCTCCCACATCTGCGCACCACTCATTTTCTCCCTTCCCCGCCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCAGGTCCGGGAGGCAGGCTTCAA
GGTCGCTTTCCGCCTTTTAGCCCTGGGCAACGGCAAGAAGGAGGAACGTC
ACGCCATCATGGCCACCTTCGAGGTAGAGAGGGAGGGAGGGAAGGAGGGA
AGGAGGGAGGGAGGGAGGGAGGGAAAGCAGTCTTTAATAATAGACATTTT
TGATCAGGGTCCACCATACCTATCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCAGGTCCTCAAAACTTT
CAACAAGCCACTCTTTGACCGGCTCGACAAGGG back to topCoding sequence (CDS) from alignment at scaffold_32:232890..235072- >mRNA_9833 ID=mRNA_9833|Name=jgi.p|Nanoce1779_2|605655|organism=Nannochloropsis oceanica|type=CDS|length=5112bp|location=Sequence derived from alignment at scaffold_32:232890..235072- (Nannochloropsis oceanica)
GTCCGGGAGGCAGGCTTCAAGGTCGCTTTCCGCCTTTTAGAAGAAGCTCC
TCGACCTCCCCTCTTCCGTCGCGGTGGCTCTGGCCAAATCCTGCTGTAGT
AACATCCAAGACTCCGACGCCAAGGCCTCCCTCGACGCCTCCAACAAGAA
GGCGGGCTCCATTCCCTACACTCGCGTCCTCGTCCTCGAATGGCTGGATC
GATGCCTTGCCCGTGTGCAGCCAGGAAGCAAGGGACAAGAAGGTCGCCAC
TCCCGCGGCGGAGGCTTTGGACAGTCTCTTCGGACACTCCCTCTCCCTGC
AGTCCGCCCTGCAAGAGATCGAGGTTTCGGGCGGTGCCATCCGCCTCATC
GGTCTCCTTGCCTCCGGCCTTAGGGAAGCTTTCTCCCCCTACGCCTCCTC
CGCTTGGACCCTCGTCCTCCTCAGAGCCAAGCCGCCGCCCGCATCATCGG
TGATGTGCCCAAGCTCGTGCCTGTTGGAGACTACGGTGACTTCCTTCGCT
CCCTCAAGCCGCTCGTCAACCACAGTCATTTCCAGCTCTCGGCCTCGGAT
TTTTATGCCAAAATCGAGGAAGTCAAGTGGTCTGAGAAGGCCGAAGCCCT
GCAGATGAGCTCGCCGACCCCGTGGACTTATTGGCCAAGGTCCGGGAGGC
AGGCTTCAAGGTCGCTTTCCGCCTTTTAGAAGAAGCTCCTCGACCTCCCC
TCTTCCGTCGCGGTGGCTCTGGCCAAATCCTGCTGTAGTAACATCCAAGA
CTCCGACGCCAAGGCCTCCCTCGACGCCTCCAACAAGAAGGCGGGCTCCA
TTCCCTACACTCGCGTCCTCGTCCTCGAATGGCTGGATCGATGCCTTGCC
CGTGTGCAGCCAGGAAGCAAGGGACAAGAAGGTCGCCACTCCCGCGGCGG
AGGCTTTGGACAGTCTCTTCGGACACTCCCTCTCCCTGCAGTCCGCCCTG
CAAGAGATCGAGGTTTCGGGCGGTGCCATCCGCCTCATCGGTCTCCTTGC
CTCCGGCCTTAGGGAAGCTTTCTCCCCCTACGCCTCCTCCGCTTGGACCC
TCGTCCTCCTCAGAGCCAAGCCGCCGCCCGCATCATCGGTGATGTGCCCA
AGCTCGTGCCTGTTGGAGACTACGGTGACTTCCTTCGCTCCCTCAAGCCG
CTCGTCAACCACAGTCATTTCCAGCTCTCGGCCTCGGATTTTTATGCCAA
AATCGAGGAAGTCAAGTGGTCTGAGAAGGCCGAAGCCCTGCAGATGAGCT
CGCCGACCCCGTGGACTTATTGGCCAAGGTCCGGGAGGCAGGCTTCAAGG
TCGCTTTCCGCCTTTTAGAAGAAGCTCCTCGACCTCCCCTCTTCCGTCGC
GGTGGCTCTGGCCAAATCCTGCTGTAGTAACATCCAAGACTCCGACGCCA
AGGCCTCCCTCGACGCCTCCAACAAGAAGGCGGGCTCCATTCCCTACACT
CGCGTCCTCGTCCTCGAATGGCTGGATCGATGCCTTGCCCGTGTGCAGCC
AGGAAGCAAGGGACAAGAAGGTCGCCACTCCCGCGGCGGAGGCTTTGGAC
AGTCTCTTCGGACACTCCCTCTCCCTGCAGTCCGCCCTGCAAGAGATCGA
GGTTTCGGGCGGTGCCATCCGCCTCATCGGTCTCCTTGCCTCCGGCCTTA
GGGAAGCTTTCTCCCCCTACGCCTCCTCCGCTTGGACCCTCGTCCTCCTC
AGAGCCAAGCCGCCGCCCGCATCATCGGTGATGTGCCCAAGCTCGTGCCT
GTTGGAGACTACGGTGACTTCCTTCGCTCCCTCAAGCCGCTCGTCAACCA
CAGTCATTTCCAGCTCTCGGCCTCGGATTTTTATGCCAAAATCGAGGAAG
TCAAGTGGTCTGAGAAGGCCGAAGCCCTGCAGATGAGCTCGCCGACCCCG
TGGACTTATTGGCCAAGGTCCGGGAGGCAGGCTTCAAGGTCGCTTTCCGC
CTTTTAGAAGAAGCTCCTCGACCTCCCCTCTTCCGTCGCGGTGGCTCTGG
CCAAATCCTGCTGTAGTAACATCCAAGACTCCGACGCCAAGGCCTCCCTC
GACGCCTCCAACAAGAAGGCGGGCTCCATTCCCTACACTCGCGTCCTCGT
CCTCGAATGGCTGGATCGATGCCTTGCCCGTGTGCAGCCAGGAAGCAAGG
GACAAGAAGGTCGCCACTCCCGCGGCGGAGGCTTTGGACAGTCTCTTCGG
ACACTCCCTCTCCCTGCAGTCCGCCCTGCAAGAGATCGAGGTTTCGGGCG
GTGCCATCCGCCTCATCGGTCTCCTTGCCTCCGGCCTTAGGGAAGCTTTC
TCCCCCTACGCCTCCTCCGCTTGGACCCTCGTCCTCCTCAGAGCCAAGCC
GCCGCCCGCATCATCGGTGATGTGCCCAAGCTCGTGCCTGTTGGAGACTA
CGGTGACTTCCTTCGCTCCCTCAAGCCGCTCGTCAACCACAGTCATTTCC
AGCTCTCGGCCTCGGATTTTTATGCCAAAATCGAGGAAGTCAAGTGGTCT
GAGAAGGCCGAAGCCCTGCAGATGAGCTCGCCGACCCCGTGGACTTATTG
GCCAAGGTCCGGGAGGCAGGCTTCAAGGTCGCTTTCCGCCTTTTAGAAGA
AGCTCCTCGACCTCCCCTCTTCCGTCGCGGTGGCTCTGGCCAAATCCTGC
TGTAGTAACATCCAAGACTCCGACGCCAAGGCCTCCCTCGACGCCTCCAA
CAAGAAGGCGGGCTCCATTCCCTACACTCGCGTCCTCGTCCTCGAATGGC
TGGATCGATGCCTTGCCCGTGTGCAGCCAGGAAGCAAGGGACAAGAAGGT
CGCCACTCCCGCGGCGGAGGCTTTGGACAGTCTCTTCGGACACTCCCTCT
CCCTGCAGTCCGCCCTGCAAGAGATCGAGGTTTCGGGCGGTGCCATCCGC
CTCATCGGTCTCCTTGCCTCCGGCCTTAGGGAAGCTTTCTCCCCCTACGC
CTCCTCCGCTTGGACCCTCGTCCTCCTCAGAGCCAAGCCGCCGCCCGCAT
CATCGGTGATGTGCCCAAGCTCGTGCCTGTTGGAGACTACGGTGACTTCC
TTCGCTCCCTCAAGCCGCTCGTCAACCACAGTCATTTCCAGCTCTCGGCC
TCGGATTTTTATGCCAAAATCGAGGAAGTCAAGTGGTCTGAGAAGGCCGA
AGCCCTGCAGATGAGCTCGCCGACCCCGTGGACTTATTGGCCAAGGTCCG
GGAGGCAGGCTTCAAGGTCGCTTTCCGCCTTTTAGAAGAAGCTCCTCGAC
CTCCCCTCTTCCGTCGCGGTGGCTCTGGCCAAATCCTGCTGTAGTAACAT
CCAAGACTCCGACGCCAAGGCCTCCCTCGACGCCTCCAACAAGAAGGCGG
GCTCCATTCCCTACACTCGCGTCCTCGTCCTCGAATGGCTGGATCGATGC
CTTGCCCGTGTGCAGCCAGGAAGCAAGGGACAAGAAGGTCGCCACTCCCG
CGGCGGAGGCTTTGGACAGTCTCTTCGGACACTCCCTCTCCCTGCAGTCC
GCCCTGCAAGAGATCGAGGTTTCGGGCGGTGCCATCCGCCTCATCGGTCT
CCTTGCCTCCGGCCTTAGGGAAGCTTTCTCCCCCTACGCCTCCTCCGCTT
GGACCCTCGTCCTCCTCAGAGCCAAGCCGCCGCCCGCATCATCGGTGATG
TGCCCAAGCTCGTGCCTGTTGGAGACTACGGTGACTTCCTTCGCTCCCTC
AAGCCGCTCGTCAACCACAGTCATTTCCAGCTCTCGGCCTCGGATTTTTA
TGCCAAAATCGAGGAAGTCAAGTGGTCTGAGAAGGCCGAAGCCCTGCAGA
TGAGCTCGCCGACCCCGTGGACTTATTGGCCAAGGTCCGGGAGGCAGGCT
TCAAGGTCGCTTTCCGCCTTTTAGAAGAAGCTCCTCGACCTCCCCTCTTC
CGTCGCGGTGGCTCTGGCCAAATCCTGCTGTAGTAACATCCAAGACTCCG
ACGCCAAGGCCTCCCTCGACGCCTCCAACAAGAAGGCGGGCTCCATTCCC
TACACTCGCGTCCTCGTCCTCGAATGGCTGGATCGATGCCTTGCCCGTGT
GCAGCCAGGAAGCAAGGGACAAGAAGGTCGCCACTCCCGCGGCGGAGGCT
TTGGACAGTCTCTTCGGACACTCCCTCTCCCTGCAGTCCGCCCTGCAAGA
GATCGAGGTTTCGGGCGGTGCCATCCGCCTCATCGGTCTCCTTGCCTCCG
GCCTTAGGGAAGCTTTCTCCCCCTACGCCTCCTCCGCTTGGACCCTCGTC
CTCCTCAGAGCCAAGCCGCCGCCCGCATCATCGGTGATGTGCCCAAGCTC
GTGCCTGTTGGAGACTACGGTGACTTCCTTCGCTCCCTCAAGCCGCTCGT
CAACCACAGTCATTTCCAGCTCTCGGCCTCGGATTTTTATGCCAAAATCG
AGGAAGTCAAGTGGTCTGAGAAGGCCGAAGCCCTGCAGATGAGCTCGCCG
ACCCCGTGGACTTATTGGCCAAGGTCCGGGAGGCAGGCTTCAAGGTCGCT
TTCCGCCTTTTAGAAGAAGCTCCTCGACCTCCCCTCTTCCGTCGCGGTGG
CTCTGGCCAAATCCTGCTGTAGTAACATCCAAGACTCCGACGCCAAGGCC
TCCCTCGACGCCTCCAACAAGAAGGCGGGCTCCATTCCCTACACTCGCGT
CCTCGTCCTCGAATGGCTGGATCGATGCCTTGCCCGTGTGCAGCCAGGAA
GCAAGGGACAAGAAGGTCGCCACTCCCGCGGCGGAGGCTTTGGACAGTCT
CTTCGGACACTCCCTCTCCCTGCAGTCCGCCCTGCAAGAGATCGAGGTTT
CGGGCGGTGCCATCCGCCTCATCGGTCTCCTTGCCTCCGGCCTTAGGGAA
GCTTTCTCCCCCTACGCCTCCTCCGCTTGGACCCTCGTCCTCCTCAGAGC
CAAGCCGCCGCCCGCATCATCGGTGATGTGCCCAAGCTCGTGCCTGTTGG
AGACTACGGTGACTTCCTTCGCTCCCTCAAGCCGCTCGTCAACCACAGTC
ATTTCCAGCTCTCGGCCTCGGATTTTTATGCCAAAATCGAGGAAGTCAAG
TGGTCTGAGAAGGCCGAAGCCCTGCAGATGAGCTCGCCGACCCCGTGGAC
TTATTGGCCAAG back to top
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