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Properties
| Property Name | Value |
|---|
| TranscriptId | 605707 |
| Track | FilteredModels2 |
| ProteinId | 605621 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_32 | supercontig | scaffold_32:203708..205820 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9823 ID=mRNA_9823|Name=jgi.p|Nanoce1779_2|605621|organism=Nannochloropsis oceanica|type=mRNA|length=937bp
CGGACGTCGCCCACGGAGGGAGGTGGGAGCGAGGGAGGGAGGGAAGGAGG
GAGGGGTTAATGAACCCTCAGTCCGCGCCTTTGAGTGGTGGACTTACTCA
TTGATATAAATATATGTATAAACTACTTTCATACCATGTTTTTTTAAAAA
TCTTCATATGTACTTCTTTAATGGTTGCAGGCCTGGCGTCCAATGGCCGA
CTCTTCGACGCCGACACTCGACACATGATAGGGCTCGTGCCGCAGGACGA
GGCGCTCTTCCCCACCCTCACCGTTCAAGAGACTCTCCTCTTCTCGGCTG
AGCTACGACTGCCAGCGAGCATGTCACTGGCGGCGAAGAAGGAGAGGGTT
GAGCAGGTGATGGAGGAGCTCAATCTGACTGGCGTGAAGGATAGCCTCAT
CGGAGACAAGCTGCACCGCGGCGTCTCCGGAGGGGAACGCAAACGTGTGT
CCATCGGCAAGGAGCTCGCCTATCAACCCCAGCTGCTCCTGTGCGATGAA
CCCACGTCCGGTCTCGATTCCTTCACCAGCGTCAAGGTGATGAAGCTTTT
GCGTCAGCTGGCCGAGCGTGGCCGGACTTTGGCATGCACCATCCACCAGC
CTTCCTCGGACATTTTCGCTCGGTTCGACCAGCTCATGCTCCTCGTCAGC
GGCCGTGTGGTTTACTACGGGAAGAGTAAGCAGGCTCTTGCCTACTTTGA
AGCCTTAGGCTTCCACTGTCCCTCCCTCTCCAATCCCGCCGACTATTTCC
TCTCCCTCTGTGACGAGTCCGATGAGCCATCGGCTGACGACCCAGCCGCT
CCTCCTCCTCGCGAGACGGTGGTGCGTCTTGTCTACCTCTATGCCTCCTC
CGCCACCAACCGGGCCACGCTGGCCGCCGTCGCCCTCGAAAAATACCCGG
AGGAGGGGGGGAAGGAGGAGGAGGAGGGGGAGGAGGA back to topprotein sequence of jgi.p|Nanoce1779_2|605621 >mRNA_9823-protein ID=mRNA_9823-protein|Name=jgi.p|Nanoce1779_2|605621|organism=Nannochloropsis oceanica|type=polypeptide|length=274bp
MYKLLSYHVFLKIFICTSLMVAGLASNGRLFDADTRHMIGLVPQDEALFP
TLTVQETLLFSAELRLPASMSLAAKKERVEQVMEELNLTGVKDSLIGDKL
HRGVSGGERKRVSIGKELAYQPQLLLCDEPTSGLDSFTSVKVMKLLRQLA
ERGRTLACTIHQPSSDIFARFDQLMLLVSGRVVYYGKSKQALAYFEALGF
HCPSLSNPADYFLSLCDESDEPSADDPAAPPPRETVVRLVYLYASSATNR
ATLAAVALEKYPEEGGKEEEEGEE back to topmRNA from alignment at scaffold_32:203708..205820- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9823 ID=mRNA_9823|Name=jgi.p|Nanoce1779_2|605621|organism=Nannochloropsis oceanica|type=mRNA|length=2113bp|location=Sequence derived from alignment at scaffold_32:203708..205820- (Nannochloropsis oceanica)
CGGACGTCGCCCACGGAGGGAGGTGGGAGCGAGGGAGGGAGGGAAGGAGG
GAGGGGTTAATGAACCCTCAGTCCGCGCCTTTGAGTGGTGGACTTACTCA
TTGATATAAATATATGTATAAACTACTTTCATACCATGTTTTTTTAAAAA
TCTTCATATGTACTTCTTTAATGGTTGCAGGCCTGGCGTCCAATGGCCGA
CTCTTCGACGCCGACACTCGACACATGATAGGGCTCGTGCCGCAGGTAGG
GAGACCCTGCCCTCCCTCCCTCCCTCCCTCGCTCCCTCCCTCCCTAGGAA
GAAGCACTCTTCCCCACCCTCACCGTTCACTCTCGCCTACTTGATCCCTC
TCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTAGGACGAGGCG
CTCTTCCCCACCCTCACCGTTCAAGAGACTCTCCTCTTCTCGGCTGAGCT
ACGACTGCCAGCGAGCATGTCACTGGCGGCGAAGAAGGAGAGGGTTGAGC
AGGTAGAAGGGGGAGGGAGGGAGGAGAGGGGAGGGGAGGGAGGGAGGGAG
TGGAGAGGGAAGGAGAGAAAGAGAGGGTTGGGCAGGGAGGGAGGGACGGA
GGGACGGAGGGAGAGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGG
GGCAGTGATTCACCATATGTTGCATTGGCTCTGATGTATTAGTACTATGA
TTAGTGTATCGGTGATGGAGGAGCTTAATTTGACTTATTTGACTTATCTT
ACGTCCCTCCATTATCTGTTTATCACTATTACTGTTATTCTTATCATTGA
TATTATAGGTGATGGAGGAGCTCAATCTGACTGGCGTGAAGGATAGCCTC
ATCGGAGACAAGGTGCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
TCCCCTTCCTCCTCTCACTCTCTCCCTCCCTCCCTACCCCCCTCTCTCCC
TTCCCCCCCCCTCCTCTCACTCTGCCCCTCCCTCCCTCCCTCCCCTCAGC
TGCACCGCGGCGTCTCCGGAGGGGAACGCAAACGTGTGTCCATCGGCAAG
GAGCTCGCCTATCAACCCCAGCTGCTCCTGTGCGATGAACCCACGTCCGG
TCTCGATTCCTTCACCAGCGTCAAGGTAACCTCCCTCCCTCCCTCCCTTC
ATTCCGCTCGTCCTTGTGGACCCCTTCCCTCTCTCCCTCATCCTCCTCCT
CCCTCCCTCCCTCCCTCCCTCCTGCCTGGTAGGTGATGAAGCTTTTGCGT
CAGCTGGCCGAGCGTGGCCGGACTTTGGCATGCACCATCCACCAGGTAGG
GAGGGAGGGACGGAGGGACGGAGGGACGGAGGGACGGAGGGACGGAGGGA
CAGAAGCAGGGACGGGGGGAAGGAAGAAGGGATTGCTCGGGCGACGAGTG
CTAACGCCAGGGCGTTCTCTCCTAGGTCTTTAACAACACACTTTAACCGC
CATACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCTAGCCTTCC
TCGGACATTTTCGCTCGGTTCGACCAGCTCATGCTCCTCGTCAGCGGCCG
TGTGGTTTACTACGGGAAGAGTAAGCAGGCTCTTGCCTACTTTGAAGCCT
TAGGTACACACCCTCCCTCTTTCCCTCCCTCCCTCCCACCGTTCTCTTCC
CTTCTTCTCACCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCGCCC
TCCCTCCCTCCCTCCCTCCCGCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCGCCCTCCCTGCCAGGCTTCCACTGTCCCTCCCTCTCCAATCCCGCCGA
CTATTTCCTCTCCCTCTGTGACGAGTCCGATGAGCCATCGGCTGACGACC
CAGCCGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAGGAAAAGCTT
ATCAGGCGCACGACGAAGAGGCAATCCCATTCACTGCTGTTTCTCCTGCT
TCCCTCCCTCCCTCCCTCCCTTAGCTCCTCCTCCTCGCGAGACGGTGGTG
CGTCTTGTCTACCTCTATGCCTCCTCCGCCACCAACCGGGCCACGCTGGC
CGCCGTCGCCCTCGAAAAATACCCGGAGGAGGGGGGGAAGGAGGAGGAGG
AGGGGGAGGAGGA back to topCoding sequence (CDS) from alignment at scaffold_32:203708..205820- >mRNA_9823 ID=mRNA_9823|Name=jgi.p|Nanoce1779_2|605621|organism=Nannochloropsis oceanica|type=CDS|length=6592bp|location=Sequence derived from alignment at scaffold_32:203708..205820- (Nannochloropsis oceanica)
CTCCTCCTCCTCGCGAGACGGTGGTGCGTCTTGTCTACCTCTATGCCTCC
TCCGCCACCAACCGGGCCACGCTGGCCGCCGTCGCCCTCGAAAAATACCC
GGAGGAGGGGGGGAAGGAGGAGGAGGAGGGGGAGGAGGAGCTTCCACTGT
CCCTCCCTCTCCAATCCCGCCGACTATTTCCTCTCCCTCTGTGACGAGTC
CGATGAGCCATCGGCTGACGACCCAGCCGCCTTCCTCGGACATTTTCGCT
CGGTTCGACCAGCTCATGCTCCTCGTCAGCGGCCGTGTGGTTTACTACGG
GAAGAGTAAGCAGGCTCTTGCCTACTTTGAAGCCTTAGGTGATGAAGCTT
TTGCGTCAGCTGGCCGAGCGTGGCCGGACTTTGGCATGCACCATCCACCA
GCTGCACCGCGGCGTCTCCGGAGGGGAACGCAAACGTGTGTCCATCGGCA
AGGAGCTCGCCTATCAACCCCAGCTGCTCCTGTGCGATGAACCCACGTCC
GGTCTCGATTCCTTCACCAGCGTCAAGGTGATGGAGGAGCTCAATCTGAC
TGGCGTGAAGGATAGCCTCATCGGAGACAAGGACGAGGCGCTCTTCCCCA
CCCTCACCGTTCAAGAGACTCTCCTCTTCTCGGCTGAGCTACGACTGCCA
GCGAGCATGTCACTGGCGGCGAAGAAGGAGAGGGTTGAGCAGATGTATAA
ACTACTTTCATACCATGTTTTTTTAAAAATCTTCATATGTACTTCTTTAA
TGGTTGCAGGCCTGGCGTCCAATGGCCGACTCTTCGACGCCGACACTCGA
CACATGATAGGGCTCGTGCCGCAGCTCCTCCTCCTCGCGAGACGGTGGTG
CGTCTTGTCTACCTCTATGCCTCCTCCGCCACCAACCGGGCCACGCTGGC
CGCCGTCGCCCTCGAAAAATACCCGGAGGAGGGGGGGAAGGAGGAGGAGG
AGGGGGAGGAGGAGCTTCCACTGTCCCTCCCTCTCCAATCCCGCCGACTA
TTTCCTCTCCCTCTGTGACGAGTCCGATGAGCCATCGGCTGACGACCCAG
CCGCCTTCCTCGGACATTTTCGCTCGGTTCGACCAGCTCATGCTCCTCGT
CAGCGGCCGTGTGGTTTACTACGGGAAGAGTAAGCAGGCTCTTGCCTACT
TTGAAGCCTTAGGTGATGAAGCTTTTGCGTCAGCTGGCCGAGCGTGGCCG
GACTTTGGCATGCACCATCCACCAGCTGCACCGCGGCGTCTCCGGAGGGG
AACGCAAACGTGTGTCCATCGGCAAGGAGCTCGCCTATCAACCCCAGCTG
CTCCTGTGCGATGAACCCACGTCCGGTCTCGATTCCTTCACCAGCGTCAA
GGTGATGGAGGAGCTCAATCTGACTGGCGTGAAGGATAGCCTCATCGGAG
ACAAGGACGAGGCGCTCTTCCCCACCCTCACCGTTCAAGAGACTCTCCTC
TTCTCGGCTGAGCTACGACTGCCAGCGAGCATGTCACTGGCGGCGAAGAA
GGAGAGGGTTGAGCAGATGTATAAACTACTTTCATACCATGTTTTTTTAA
AAATCTTCATATGTACTTCTTTAATGGTTGCAGGCCTGGCGTCCAATGGC
CGACTCTTCGACGCCGACACTCGACACATGATAGGGCTCGTGCCGCAGCT
CCTCCTCCTCGCGAGACGGTGGTGCGTCTTGTCTACCTCTATGCCTCCTC
CGCCACCAACCGGGCCACGCTGGCCGCCGTCGCCCTCGAAAAATACCCGG
AGGAGGGGGGGAAGGAGGAGGAGGAGGGGGAGGAGGAGCTTCCACTGTCC
CTCCCTCTCCAATCCCGCCGACTATTTCCTCTCCCTCTGTGACGAGTCCG
ATGAGCCATCGGCTGACGACCCAGCCGCCTTCCTCGGACATTTTCGCTCG
GTTCGACCAGCTCATGCTCCTCGTCAGCGGCCGTGTGGTTTACTACGGGA
AGAGTAAGCAGGCTCTTGCCTACTTTGAAGCCTTAGGTGATGAAGCTTTT
GCGTCAGCTGGCCGAGCGTGGCCGGACTTTGGCATGCACCATCCACCAGC
TGCACCGCGGCGTCTCCGGAGGGGAACGCAAACGTGTGTCCATCGGCAAG
GAGCTCGCCTATCAACCCCAGCTGCTCCTGTGCGATGAACCCACGTCCGG
TCTCGATTCCTTCACCAGCGTCAAGGTGATGGAGGAGCTCAATCTGACTG
GCGTGAAGGATAGCCTCATCGGAGACAAGGACGAGGCGCTCTTCCCCACC
CTCACCGTTCAAGAGACTCTCCTCTTCTCGGCTGAGCTACGACTGCCAGC
GAGCATGTCACTGGCGGCGAAGAAGGAGAGGGTTGAGCAGATGTATAAAC
TACTTTCATACCATGTTTTTTTAAAAATCTTCATATGTACTTCTTTAATG
GTTGCAGGCCTGGCGTCCAATGGCCGACTCTTCGACGCCGACACTCGACA
CATGATAGGGCTCGTGCCGCAGCTCCTCCTCCTCGCGAGACGGTGGTGCG
TCTTGTCTACCTCTATGCCTCCTCCGCCACCAACCGGGCCACGCTGGCCG
CCGTCGCCCTCGAAAAATACCCGGAGGAGGGGGGGAAGGAGGAGGAGGAG
GGGGAGGAGGAGCTTCCACTGTCCCTCCCTCTCCAATCCCGCCGACTATT
TCCTCTCCCTCTGTGACGAGTCCGATGAGCCATCGGCTGACGACCCAGCC
GCCTTCCTCGGACATTTTCGCTCGGTTCGACCAGCTCATGCTCCTCGTCA
GCGGCCGTGTGGTTTACTACGGGAAGAGTAAGCAGGCTCTTGCCTACTTT
GAAGCCTTAGGTGATGAAGCTTTTGCGTCAGCTGGCCGAGCGTGGCCGGA
CTTTGGCATGCACCATCCACCAGCTGCACCGCGGCGTCTCCGGAGGGGAA
CGCAAACGTGTGTCCATCGGCAAGGAGCTCGCCTATCAACCCCAGCTGCT
CCTGTGCGATGAACCCACGTCCGGTCTCGATTCCTTCACCAGCGTCAAGG
TGATGGAGGAGCTCAATCTGACTGGCGTGAAGGATAGCCTCATCGGAGAC
AAGGACGAGGCGCTCTTCCCCACCCTCACCGTTCAAGAGACTCTCCTCTT
CTCGGCTGAGCTACGACTGCCAGCGAGCATGTCACTGGCGGCGAAGAAGG
AGAGGGTTGAGCAGATGTATAAACTACTTTCATACCATGTTTTTTTAAAA
ATCTTCATATGTACTTCTTTAATGGTTGCAGGCCTGGCGTCCAATGGCCG
ACTCTTCGACGCCGACACTCGACACATGATAGGGCTCGTGCCGCAGCTCC
TCCTCCTCGCGAGACGGTGGTGCGTCTTGTCTACCTCTATGCCTCCTCCG
CCACCAACCGGGCCACGCTGGCCGCCGTCGCCCTCGAAAAATACCCGGAG
GAGGGGGGGAAGGAGGAGGAGGAGGGGGAGGAGGAGCTTCCACTGTCCCT
CCCTCTCCAATCCCGCCGACTATTTCCTCTCCCTCTGTGACGAGTCCGAT
GAGCCATCGGCTGACGACCCAGCCGCCTTCCTCGGACATTTTCGCTCGGT
TCGACCAGCTCATGCTCCTCGTCAGCGGCCGTGTGGTTTACTACGGGAAG
AGTAAGCAGGCTCTTGCCTACTTTGAAGCCTTAGGTGATGAAGCTTTTGC
GTCAGCTGGCCGAGCGTGGCCGGACTTTGGCATGCACCATCCACCAGCTG
CACCGCGGCGTCTCCGGAGGGGAACGCAAACGTGTGTCCATCGGCAAGGA
GCTCGCCTATCAACCCCAGCTGCTCCTGTGCGATGAACCCACGTCCGGTC
TCGATTCCTTCACCAGCGTCAAGGTGATGGAGGAGCTCAATCTGACTGGC
GTGAAGGATAGCCTCATCGGAGACAAGGACGAGGCGCTCTTCCCCACCCT
CACCGTTCAAGAGACTCTCCTCTTCTCGGCTGAGCTACGACTGCCAGCGA
GCATGTCACTGGCGGCGAAGAAGGAGAGGGTTGAGCAGATGTATAAACTA
CTTTCATACCATGTTTTTTTAAAAATCTTCATATGTACTTCTTTAATGGT
TGCAGGCCTGGCGTCCAATGGCCGACTCTTCGACGCCGACACTCGACACA
TGATAGGGCTCGTGCCGCAGCTCCTCCTCCTCGCGAGACGGTGGTGCGTC
TTGTCTACCTCTATGCCTCCTCCGCCACCAACCGGGCCACGCTGGCCGCC
GTCGCCCTCGAAAAATACCCGGAGGAGGGGGGGAAGGAGGAGGAGGAGGG
GGAGGAGGAGCTTCCACTGTCCCTCCCTCTCCAATCCCGCCGACTATTTC
CTCTCCCTCTGTGACGAGTCCGATGAGCCATCGGCTGACGACCCAGCCGC
CTTCCTCGGACATTTTCGCTCGGTTCGACCAGCTCATGCTCCTCGTCAGC
GGCCGTGTGGTTTACTACGGGAAGAGTAAGCAGGCTCTTGCCTACTTTGA
AGCCTTAGGTGATGAAGCTTTTGCGTCAGCTGGCCGAGCGTGGCCGGACT
TTGGCATGCACCATCCACCAGCTGCACCGCGGCGTCTCCGGAGGGGAACG
CAAACGTGTGTCCATCGGCAAGGAGCTCGCCTATCAACCCCAGCTGCTCC
TGTGCGATGAACCCACGTCCGGTCTCGATTCCTTCACCAGCGTCAAGGTG
ATGGAGGAGCTCAATCTGACTGGCGTGAAGGATAGCCTCATCGGAGACAA
GGACGAGGCGCTCTTCCCCACCCTCACCGTTCAAGAGACTCTCCTCTTCT
CGGCTGAGCTACGACTGCCAGCGAGCATGTCACTGGCGGCGAAGAAGGAG
AGGGTTGAGCAGATGTATAAACTACTTTCATACCATGTTTTTTTAAAAAT
CTTCATATGTACTTCTTTAATGGTTGCAGGCCTGGCGTCCAATGGCCGAC
TCTTCGACGCCGACACTCGACACATGATAGGGCTCGTGCCGCAGCTCCTC
CTCCTCGCGAGACGGTGGTGCGTCTTGTCTACCTCTATGCCTCCTCCGCC
ACCAACCGGGCCACGCTGGCCGCCGTCGCCCTCGAAAAATACCCGGAGGA
GGGGGGGAAGGAGGAGGAGGAGGGGGAGGAGGAGCTTCCACTGTCCCTCC
CTCTCCAATCCCGCCGACTATTTCCTCTCCCTCTGTGACGAGTCCGATGA
GCCATCGGCTGACGACCCAGCCGCCTTCCTCGGACATTTTCGCTCGGTTC
GACCAGCTCATGCTCCTCGTCAGCGGCCGTGTGGTTTACTACGGGAAGAG
TAAGCAGGCTCTTGCCTACTTTGAAGCCTTAGGTGATGAAGCTTTTGCGT
CAGCTGGCCGAGCGTGGCCGGACTTTGGCATGCACCATCCACCAGCTGCA
CCGCGGCGTCTCCGGAGGGGAACGCAAACGTGTGTCCATCGGCAAGGAGC
TCGCCTATCAACCCCAGCTGCTCCTGTGCGATGAACCCACGTCCGGTCTC
GATTCCTTCACCAGCGTCAAGGTGATGGAGGAGCTCAATCTGACTGGCGT
GAAGGATAGCCTCATCGGAGACAAGGACGAGGCGCTCTTCCCCACCCTCA
CCGTTCAAGAGACTCTCCTCTTCTCGGCTGAGCTACGACTGCCAGCGAGC
ATGTCACTGGCGGCGAAGAAGGAGAGGGTTGAGCAGATGTATAAACTACT
TTCATACCATGTTTTTTTAAAAATCTTCATATGTACTTCTTTAATGGTTG
CAGGCCTGGCGTCCAATGGCCGACTCTTCGACGCCGACACTCGACACATG
ATAGGGCTCGTGCCGCAGCTCCTCCTCCTCGCGAGACGGTGGTGCGTCTT
GTCTACCTCTATGCCTCCTCCGCCACCAACCGGGCCACGCTGGCCGCCGT
CGCCCTCGAAAAATACCCGGAGGAGGGGGGGAAGGAGGAGGAGGAGGGGG
AGGAGGAGCTTCCACTGTCCCTCCCTCTCCAATCCCGCCGACTATTTCCT
CTCCCTCTGTGACGAGTCCGATGAGCCATCGGCTGACGACCCAGCCGCCT
TCCTCGGACATTTTCGCTCGGTTCGACCAGCTCATGCTCCTCGTCAGCGG
CCGTGTGGTTTACTACGGGAAGAGTAAGCAGGCTCTTGCCTACTTTGAAG
CCTTAGGTGATGAAGCTTTTGCGTCAGCTGGCCGAGCGTGGCCGGACTTT
GGCATGCACCATCCACCAGCTGCACCGCGGCGTCTCCGGAGGGGAACGCA
AACGTGTGTCCATCGGCAAGGAGCTCGCCTATCAACCCCAGCTGCTCCTG
TGCGATGAACCCACGTCCGGTCTCGATTCCTTCACCAGCGTCAAGGTGAT
GGAGGAGCTCAATCTGACTGGCGTGAAGGATAGCCTCATCGGAGACAAGG
ACGAGGCGCTCTTCCCCACCCTCACCGTTCAAGAGACTCTCCTCTTCTCG
GCTGAGCTACGACTGCCAGCGAGCATGTCACTGGCGGCGAAGAAGGAGAG
GGTTGAGCAGATGTATAAACTACTTTCATACCATGTTTTTTTAAAAATCT
TCATATGTACTTCTTTAATGGTTGCAGGCCTGGCGTCCAATGGCCGACTC
TTCGACGCCGACACTCGACACATGATAGGGCTCGTGCCGCAG back to top
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