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Properties
| Property Name | Value |
|---|
| TranscriptId | 605705 |
| Track | FilteredModels2 |
| ProteinId | 605619 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_32 | supercontig | scaffold_32:201645..203694 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9822 ID=mRNA_9822|Name=jgi.p|Nanoce1779_2|605619|organism=Nannochloropsis oceanica|type=mRNA|length=1017bp
GGGGGAGGTTGGATTGGGGGAAGCAGTTTTGGGTGTTGTGTCGAAGGAGC
TTATTGCACAGCTGCCGAAACCCCCTCTCCTCCTACGTGGTGGTGGGACG
CACCATCATCATGGCTCTCCTCGTCGGCTCGCTTTATTACCAGCTCGACC
TGAGCACGGCGGGTATCATGAACCGCGAAGGCGCCATTTTCTTTATCCTC
GTCAACCAGATATTCAGCTCCCTGGGCTCCCTCCACATGCTCCTCGACGA
GCAAGAGATCGTCTCTCACGAGTCCCGCTCGGCCATGTACCCTGTCTCGG
CCTACTACTCTGCCAAGCAGGTGGCCGAGCTACCAGTCCAACTCTGCACG
TCGGCCCTCTTCGCCATCGTCACCTACTGGATGGTGGGCTTCCAACGATC
GGCCGCCCGCTTCTTCAGCTTTATCGCTGCCATGCTCCTCACAGGACTTG
TAGGCGAGAGCTACATTCTGGTCTGCGGCGCCGTCACCACCAGTGGGAAG
GTAGCCATTGTCATCGCGCCTGTCCTAATGGCCCTCTTCATGCTCTTCGG
TGGTTTCTTCATCAATGCCGGCTCTGTCCCTGCGTATTACGCTTGGATCA
AGTACATCTCCCTCTTCAACTACCTGAACGGAGCCCTCCAAAAAAACGAG
CTCGAAGGCCTCGTTTTCGAGGATGGCACCACTGGTGATGACGTACGTCC
CACCCCTCCCTTTCTTTTTCACTCTCTCCGGCTGTGTGACCAACCTCCTT
TTTCCCCTCCCTTCCTCCCTTCCTCCCTCTCTTCCTCCCTCCCTCCCTCA
GGTCCTTGCCTCCCTTCACCTCCTCCCTCTCTCCGTCTGGTCCAACTTAT
TTGTAATTTGTGGCATGATTGTGGCTTTTAGAGCCCTGGCTTTTGTCTTT
GTTAGAAGGAATTTTACCCCTGCCCCTTTTCGCCTTCCTTCCCCCCCTCC
CTCCTCGAAGGAGAACGAGGACGGGACGGGGAGGGAGGAGAAGGTGGAGG
GAGAGGAGGAGGAGGAG back to topprotein sequence of jgi.p|Nanoce1779_2|605619 >mRNA_9822-protein ID=mRNA_9822-protein|Name=jgi.p|Nanoce1779_2|605619|organism=Nannochloropsis oceanica|type=polypeptide|length=257bp
MALLVGSLYYQLDLSTAGIMNREGAIFFILVNQIFSSLGSLHMLLDEQEI
VSHESRSAMYPVSAYYSAKQVAELPVQLCTSALFAIVTYWMVGFQRSAAR
FFSFIAAMLLTGLVGESYILVCGAVTTSGKVAIVIAPVLMALFMLFGGFF
INAGSVPAYYAWIKYISLFNYLNGALQKNELEGLVFEDGTTGDDVRPTPP
FLFHSLRLCDQPPFSPPFLPSSLSSSLPPSGPCLPSPPPSLRLVQLICNL
WHDCGF* back to topmRNA from alignment at scaffold_32:201645..203694- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9822 ID=mRNA_9822|Name=jgi.p|Nanoce1779_2|605619|organism=Nannochloropsis oceanica|type=mRNA|length=2050bp|location=Sequence derived from alignment at scaffold_32:201645..203694- (Nannochloropsis oceanica)
GGGGGAGGTTGGATTGGGGGAAGCAGTTTTGGGTGTTGTGTCGAAGGAGC
TTATTGCACAGGTAGGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGGA
CAAATGGAAGAAGTCGAAACCATCGTTGGTGTGCCTGACGTCTTACCCCT
CCCTCTCTCCCTCCCTCCCTCCCTCCCAGCTGCCGAAACCCCCTCTCCTC
CTACGTGGTGGTGGGACGCACCATCATCATGGCTCTCCTCGTCGGCTCGC
TTTATTACCAGCTCGACCTGAGTAAGCCCTGCCCCCCTCCCCCCCCCCCC
CCTCCCTCCCCCCCCTCCCTCCCTCCTTCTCTCGATATTTCTTCCTGTCC
GAGCCCGCCATCTCTCCTCCTCTCCCTCCCTGCCTCCTCCTCTACCTCCC
TCAAAATAATTTCCCATCCATCCCTCCCTCCCTCCCTCCCTCCCTTTCCC
AGGCACGGCGGGTATCATGAACCGCGAAGGCGCCATTTTCTTTATCCTCG
TCAACCAGATATTCAGGTAGCGAAAGAGGGAGAGAGGGAGGGAGGGAGGG
AGGAAGGACTCATCAATAGCGGCTGGTCCTCAATTTTTATATATCATCCT
CCCTCCCTTCCTCCCTTCCTTCCTCAAGCAGCTCCCTGGGCATCCTCCAC
ATGCTCCTCACTTTAAATACACCTTTCTCCCTCCCTCCCTCCCTCCCTCC
TTCCCTCAGCTCCCTGGGCTCCCTCCACATGCTCCTCGACGAGCAAGAGA
TCGTCTCTCACGAGTCCCGCTCGGCCATGTACCCTGTCTCGGCCTACTAC
TCTGCCAAGCAGGTAATCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCT
TCCACCCTCCTGACCTCATCATCATCGTCTTCCCATCTAATCACCATTCT
CTTCCCATCTAACCATCGTCACCACCCCATCTAATCATCTCATCTTATCA
AATGTCATCCCCCCATCTAATCGTCATCATCTTTCCATCTAATCATTGTT
ACCCCATCTAATCATCCTCATGTACCCATCGAATCACAGGTGGCCGAGCT
ACCAGTCCAACTCTGCACGTCGGTACGTCCCTCTCCCTCCCTCCCTCCCT
CCCTCCCTCAGGCCCACCCCACCATTATCACCTACTGGATGGTGGAGGAC
AGCACTCACCTCCCTCCCTCCCTCTCTCGCTCCTTCCCTCAGGCCCTCTT
CGCCATCGTCACCTACTGGATGGTGGGCTTCCAACGATCGGCCGCCCGCT
TCTTCAGCTTTATCGCTGCCATGCTCCTCACAGGACTTGTAGGCGAGAGC
TACATTCGTACGTGCCCTTCTTTCCTCCTTCCCTCCTTCCCTCCCTTCCT
CCGCCTCTCCCCATCACACCGTTTTCCCTCCCTCCCTCTCTCCCTCCCTC
CCTCCCTCCCCAGTGGTCTGCGGCGCCGTCACCACCAGTGGGAAGGTAGC
CATTGTCATCGCGCCTGTCCTAATGGCCCTCTTCATGCTCTTCGGTGGTT
TCTTCATCAATGCCGGCTCTGTCCCTGCGTATTACGCTTGGATCAAGGTA
CTGCCCTACCTCCCTCCCTCCCTCCCTCCTTGATGTATCGCTCGTCGTCC
TCACCCTCCTTCCATCCCTTCCTCCTCTCCCTCAGTACATCTCCCTCTTC
AACTACCTGAACGGAGCCCTCCAAAAAAACGAGCTCGAAGGCCTCGTTTT
CGAGGATGGCACCACTGGTGATGACGTACGTCCCACCCCTCCCTTTCTTT
TTCACTCTCTCCGGCTGTGTGACCAACCTCCTTTTTCCCCTCCCTTCCTC
CCTTCCTCCCTCTCTTCCTCCCTCCCTCCCTCAGGTCCTTGCCTCCCTTC
ACCTCCTCCCTCTCTCCGTCTGGTCCAACTTATTTGTAATTTGTGGCATG
ATTGTGGCTTTTAGAGCCCTGGCTTTTGTCTTTGTTAGAAGGAATTTTAC
CCCTGCCCCTTTTCGCCTTCCTTCCCCCCCTCCCTCCTCGAAGGAGAACG
AGGACGGGACGGGGAGGGAGGAGAAGGTGGAGGGAGAGGAGGAGGAGGAG
back to topCoding sequence (CDS) from alignment at scaffold_32:201645..203694- >mRNA_9822 ID=mRNA_9822|Name=jgi.p|Nanoce1779_2|605619|organism=Nannochloropsis oceanica|type=CDS|length=5397bp|location=Sequence derived from alignment at scaffold_32:201645..203694- (Nannochloropsis oceanica)
TACATCTCCCTCTTCAACTACCTGAACGGAGCCCTCCAAAAAAACGAGCT
CGAAGGCCTCGTTTTCGAGGATGGCACCACTGGTGATGACGTACGTCCCA
CCCCTCCCTTTCTTTTTCACTCTCTCCGGCTGTGTGACCAACCTCCTTTT
TCCCCTCCCTTCCTCCCTTCCTCCCTCTCTTCCTCCCTCCCTCCCTCAGG
TCCTTGCCTCCCTTCACCTCCTCCCTCTCTCCGTCTGGTCCAACTTATTT
GTAATTTGTGGCATGATTGTGGCTTTTAGTGGTCTGCGGCGCCGTCACCA
CCAGTGGGAAGGTAGCCATTGTCATCGCGCCTGTCCTAATGGCCCTCTTC
ATGCTCTTCGGTGGTTTCTTCATCAATGCCGGCTCTGTCCCTGCGTATTA
CGCTTGGATCAAGGCCCTCTTCGCCATCGTCACCTACTGGATGGTGGGCT
TCCAACGATCGGCCGCCCGCTTCTTCAGCTTTATCGCTGCCATGCTCCTC
ACAGGACTTGTAGGCGAGAGCTACATTCGTGGCCGAGCTACCAGTCCAAC
TCTGCACGTCGCTCCCTGGGCTCCCTCCACATGCTCCTCGACGAGCAAGA
GATCGTCTCTCACGAGTCCCGCTCGGCCATGTACCCTGTCTCGGCCTACT
ACTCTGCCAAGCAGGCACGGCGGGTATCATGAACCGCGAAGGCGCCATTT
TCTTTATCCTCGTCAACCAGATATTCAGATGGCTCTCCTCGTCGGCTCGC
TTTATTACCAGCTCGACCTGATACATCTCCCTCTTCAACTACCTGAACGG
AGCCCTCCAAAAAAACGAGCTCGAAGGCCTCGTTTTCGAGGATGGCACCA
CTGGTGATGACGTACGTCCCACCCCTCCCTTTCTTTTTCACTCTCTCCGG
CTGTGTGACCAACCTCCTTTTTCCCCTCCCTTCCTCCCTTCCTCCCTCTC
TTCCTCCCTCCCTCCCTCAGGTCCTTGCCTCCCTTCACCTCCTCCCTCTC
TCCGTCTGGTCCAACTTATTTGTAATTTGTGGCATGATTGTGGCTTTTAG
TGGTCTGCGGCGCCGTCACCACCAGTGGGAAGGTAGCCATTGTCATCGCG
CCTGTCCTAATGGCCCTCTTCATGCTCTTCGGTGGTTTCTTCATCAATGC
CGGCTCTGTCCCTGCGTATTACGCTTGGATCAAGGCCCTCTTCGCCATCG
TCACCTACTGGATGGTGGGCTTCCAACGATCGGCCGCCCGCTTCTTCAGC
TTTATCGCTGCCATGCTCCTCACAGGACTTGTAGGCGAGAGCTACATTCG
TGGCCGAGCTACCAGTCCAACTCTGCACGTCGCTCCCTGGGCTCCCTCCA
CATGCTCCTCGACGAGCAAGAGATCGTCTCTCACGAGTCCCGCTCGGCCA
TGTACCCTGTCTCGGCCTACTACTCTGCCAAGCAGGCACGGCGGGTATCA
TGAACCGCGAAGGCGCCATTTTCTTTATCCTCGTCAACCAGATATTCAGA
TGGCTCTCCTCGTCGGCTCGCTTTATTACCAGCTCGACCTGATACATCTC
CCTCTTCAACTACCTGAACGGAGCCCTCCAAAAAAACGAGCTCGAAGGCC
TCGTTTTCGAGGATGGCACCACTGGTGATGACGTACGTCCCACCCCTCCC
TTTCTTTTTCACTCTCTCCGGCTGTGTGACCAACCTCCTTTTTCCCCTCC
CTTCCTCCCTTCCTCCCTCTCTTCCTCCCTCCCTCCCTCAGGTCCTTGCC
TCCCTTCACCTCCTCCCTCTCTCCGTCTGGTCCAACTTATTTGTAATTTG
TGGCATGATTGTGGCTTTTAGTGGTCTGCGGCGCCGTCACCACCAGTGGG
AAGGTAGCCATTGTCATCGCGCCTGTCCTAATGGCCCTCTTCATGCTCTT
CGGTGGTTTCTTCATCAATGCCGGCTCTGTCCCTGCGTATTACGCTTGGA
TCAAGGCCCTCTTCGCCATCGTCACCTACTGGATGGTGGGCTTCCAACGA
TCGGCCGCCCGCTTCTTCAGCTTTATCGCTGCCATGCTCCTCACAGGACT
TGTAGGCGAGAGCTACATTCGTGGCCGAGCTACCAGTCCAACTCTGCACG
TCGCTCCCTGGGCTCCCTCCACATGCTCCTCGACGAGCAAGAGATCGTCT
CTCACGAGTCCCGCTCGGCCATGTACCCTGTCTCGGCCTACTACTCTGCC
AAGCAGGCACGGCGGGTATCATGAACCGCGAAGGCGCCATTTTCTTTATC
CTCGTCAACCAGATATTCAGATGGCTCTCCTCGTCGGCTCGCTTTATTAC
CAGCTCGACCTGATACATCTCCCTCTTCAACTACCTGAACGGAGCCCTCC
AAAAAAACGAGCTCGAAGGCCTCGTTTTCGAGGATGGCACCACTGGTGAT
GACGTACGTCCCACCCCTCCCTTTCTTTTTCACTCTCTCCGGCTGTGTGA
CCAACCTCCTTTTTCCCCTCCCTTCCTCCCTTCCTCCCTCTCTTCCTCCC
TCCCTCCCTCAGGTCCTTGCCTCCCTTCACCTCCTCCCTCTCTCCGTCTG
GTCCAACTTATTTGTAATTTGTGGCATGATTGTGGCTTTTAGTGGTCTGC
GGCGCCGTCACCACCAGTGGGAAGGTAGCCATTGTCATCGCGCCTGTCCT
AATGGCCCTCTTCATGCTCTTCGGTGGTTTCTTCATCAATGCCGGCTCTG
TCCCTGCGTATTACGCTTGGATCAAGGCCCTCTTCGCCATCGTCACCTAC
TGGATGGTGGGCTTCCAACGATCGGCCGCCCGCTTCTTCAGCTTTATCGC
TGCCATGCTCCTCACAGGACTTGTAGGCGAGAGCTACATTCGTGGCCGAG
CTACCAGTCCAACTCTGCACGTCGCTCCCTGGGCTCCCTCCACATGCTCC
TCGACGAGCAAGAGATCGTCTCTCACGAGTCCCGCTCGGCCATGTACCCT
GTCTCGGCCTACTACTCTGCCAAGCAGGCACGGCGGGTATCATGAACCGC
GAAGGCGCCATTTTCTTTATCCTCGTCAACCAGATATTCAGATGGCTCTC
CTCGTCGGCTCGCTTTATTACCAGCTCGACCTGATACATCTCCCTCTTCA
ACTACCTGAACGGAGCCCTCCAAAAAAACGAGCTCGAAGGCCTCGTTTTC
GAGGATGGCACCACTGGTGATGACGTACGTCCCACCCCTCCCTTTCTTTT
TCACTCTCTCCGGCTGTGTGACCAACCTCCTTTTTCCCCTCCCTTCCTCC
CTTCCTCCCTCTCTTCCTCCCTCCCTCCCTCAGGTCCTTGCCTCCCTTCA
CCTCCTCCCTCTCTCCGTCTGGTCCAACTTATTTGTAATTTGTGGCATGA
TTGTGGCTTTTAGTGGTCTGCGGCGCCGTCACCACCAGTGGGAAGGTAGC
CATTGTCATCGCGCCTGTCCTAATGGCCCTCTTCATGCTCTTCGGTGGTT
TCTTCATCAATGCCGGCTCTGTCCCTGCGTATTACGCTTGGATCAAGGCC
CTCTTCGCCATCGTCACCTACTGGATGGTGGGCTTCCAACGATCGGCCGC
CCGCTTCTTCAGCTTTATCGCTGCCATGCTCCTCACAGGACTTGTAGGCG
AGAGCTACATTCGTGGCCGAGCTACCAGTCCAACTCTGCACGTCGCTCCC
TGGGCTCCCTCCACATGCTCCTCGACGAGCAAGAGATCGTCTCTCACGAG
TCCCGCTCGGCCATGTACCCTGTCTCGGCCTACTACTCTGCCAAGCAGGC
ACGGCGGGTATCATGAACCGCGAAGGCGCCATTTTCTTTATCCTCGTCAA
CCAGATATTCAGATGGCTCTCCTCGTCGGCTCGCTTTATTACCAGCTCGA
CCTGATACATCTCCCTCTTCAACTACCTGAACGGAGCCCTCCAAAAAAAC
GAGCTCGAAGGCCTCGTTTTCGAGGATGGCACCACTGGTGATGACGTACG
TCCCACCCCTCCCTTTCTTTTTCACTCTCTCCGGCTGTGTGACCAACCTC
CTTTTTCCCCTCCCTTCCTCCCTTCCTCCCTCTCTTCCTCCCTCCCTCCC
TCAGGTCCTTGCCTCCCTTCACCTCCTCCCTCTCTCCGTCTGGTCCAACT
TATTTGTAATTTGTGGCATGATTGTGGCTTTTAGTGGTCTGCGGCGCCGT
CACCACCAGTGGGAAGGTAGCCATTGTCATCGCGCCTGTCCTAATGGCCC
TCTTCATGCTCTTCGGTGGTTTCTTCATCAATGCCGGCTCTGTCCCTGCG
TATTACGCTTGGATCAAGGCCCTCTTCGCCATCGTCACCTACTGGATGGT
GGGCTTCCAACGATCGGCCGCCCGCTTCTTCAGCTTTATCGCTGCCATGC
TCCTCACAGGACTTGTAGGCGAGAGCTACATTCGTGGCCGAGCTACCAGT
CCAACTCTGCACGTCGCTCCCTGGGCTCCCTCCACATGCTCCTCGACGAG
CAAGAGATCGTCTCTCACGAGTCCCGCTCGGCCATGTACCCTGTCTCGGC
CTACTACTCTGCCAAGCAGGCACGGCGGGTATCATGAACCGCGAAGGCGC
CATTTTCTTTATCCTCGTCAACCAGATATTCAGATGGCTCTCCTCGTCGG
CTCGCTTTATTACCAGCTCGACCTGATACATCTCCCTCTTCAACTACCTG
AACGGAGCCCTCCAAAAAAACGAGCTCGAAGGCCTCGTTTTCGAGGATGG
CACCACTGGTGATGACGTACGTCCCACCCCTCCCTTTCTTTTTCACTCTC
TCCGGCTGTGTGACCAACCTCCTTTTTCCCCTCCCTTCCTCCCTTCCTCC
CTCTCTTCCTCCCTCCCTCCCTCAGGTCCTTGCCTCCCTTCACCTCCTCC
CTCTCTCCGTCTGGTCCAACTTATTTGTAATTTGTGGCATGATTGTGGCT
TTTAGTGGTCTGCGGCGCCGTCACCACCAGTGGGAAGGTAGCCATTGTCA
TCGCGCCTGTCCTAATGGCCCTCTTCATGCTCTTCGGTGGTTTCTTCATC
AATGCCGGCTCTGTCCCTGCGTATTACGCTTGGATCAAGGCCCTCTTCGC
CATCGTCACCTACTGGATGGTGGGCTTCCAACGATCGGCCGCCCGCTTCT
TCAGCTTTATCGCTGCCATGCTCCTCACAGGACTTGTAGGCGAGAGCTAC
ATTCGTGGCCGAGCTACCAGTCCAACTCTGCACGTCGCTCCCTGGGCTCC
CTCCACATGCTCCTCGACGAGCAAGAGATCGTCTCTCACGAGTCCCGCTC
GGCCATGTACCCTGTCTCGGCCTACTACTCTGCCAAGCAGGCACGGCGGG
TATCATGAACCGCGAAGGCGCCATTTTCTTTATCCTCGTCAACCAGATAT
TCAGATGGCTCTCCTCGTCGGCTCGCTTTATTACCAGCTCGACCTGA back to top
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