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Properties
| Property Name | Value |
|---|
| TranscriptId | 263022 |
| Track | FilteredModels2 |
| ProteinId | 262936 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_32 | supercontig | scaffold_32:198976..201012 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9821 ID=mRNA_9821|Name=jgi.p|Nanoce1779_2|262936|organism=Nannochloropsis oceanica|type=mRNA|length=1156bp
TGCATGGAAGGCACAAAGGAAACGGACCTACTGACCAGCCCTCTTGCCTC
CGACCTTCTGAGCCTAGGCCACGCTATGGTACGACAACCAAAGCTTGCAC
CCGATACATGAGTACGCATTCACGTCTCACGCATCTCCCCGCTCATTCGC
CCTCTTCCTAAGCCAGGCTGCTTAACCGAGGAACCTCCTCCGGCGCCTCA
AACGCTATCCCCGGGCCTTTCGCCTCCCCCCCGTGTCATCCCTACCCCTC
TACCAGCCCACCTTCTCCTCCCATTTCTCTCCACGACAATCCAGAGCCAT
GGCACGCAATGAAGAAAAGGCACAGGCCATGCTTAATAAATGGCTGACCA
TGAAGAAGGACCTCGCCACCGGAGATAAGGAACGACGGCCTTTTTTATCT
TCGGACTGCCACACGCTGCCGGAGGCGGAGCGATGGCGGCGGCAGATCAT
CAAGGAAGTCTCCAAGAAGGTCACCGAGATCCAAAACGCGGGCCTCGGGG
AACACCGCCTTCGGGATTTGAACGACCAGATTAATAAACTACTCCGTGAG
AAATATCACTGGCAAAGGCGGATCAAGGAGCTAGGTGGGCCAGACTACAA
CAGGATCGAGCCGCGGGCCTTCGACGCGGACGGTCGGGAGCTACCCGGAG
GAGGAGGATACAAGTATTTCGGGGCTGCCAAGGACCTCCCGGGCGTCAAG
GAGCTCTTCCAAAAGTCGGCCCCGAAGGAAATGAGACGGACCCGAGGCGA
TATGTACAAGGGAATCGACCCCGACTACTACGGCTACAGAGACGAAGACG
ACGGCGTTCTACTCAAAAAGGAGGCTGAGGTGGAAAAGATTGCGGTAGCC
GCTGCCGTGCGTGCCTTCAAACGACCCCGGCAGGAGGATGCGAAGGAGCA
GCAGCAGCAGCAGCAGCAGCTGCAGGAGGAGGAGGAAGAGGAGGGCGAGG
AGGAGGAACGCTTGCTAGCCCAGTCCTTGGCTGCGGCGACGGGAACGAAG
GCGGGGGGAGCAGCAGCGAGTGCAGCGACGAGTGCGGCGGTCAAAGCGCA
CGTGCCCGTGCCGAGGCAGGAAGATATCCAAGCAGCATTAATGGAGAAGA
AAAAGAGGGCCTTGATGTCCAAGTATGTGTAGATGGGGGGGAAGGAGATA
GGGAGG back to topprotein sequence of jgi.p|Nanoce1779_2|262936 >mRNA_9821-protein ID=mRNA_9821-protein|Name=jgi.p|Nanoce1779_2|262936|organism=Nannochloropsis oceanica|type=polypeptide|length=278bp
MARNEEKAQAMLNKWLTMKKDLATGDKERRPFLSSDCHTLPEAERWRRQI
IKEVSKKVTEIQNAGLGEHRLRDLNDQINKLLREKYHWQRRIKELGGPDY
NRIEPRAFDADGRELPGGGGYKYFGAAKDLPGVKELFQKSAPKEMRRTRG
DMYKGIDPDYYGYRDEDDGVLLKKEAEVEKIAVAAAVRAFKRPRQEDAKE
QQQQQQQLQEEEEEEGEEEERLLAQSLAAATGTKAGGAAASAATSAAVKA
HVPVPRQEDIQAALMEKKKRALMSKYV* back to topmRNA from alignment at scaffold_32:198976..201012- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9821 ID=mRNA_9821|Name=jgi.p|Nanoce1779_2|262936|organism=Nannochloropsis oceanica|type=mRNA|length=2037bp|location=Sequence derived from alignment at scaffold_32:198976..201012- (Nannochloropsis oceanica)
TGCATGGAAGGCACAAAGGAAACGGACCTACTGACCAGCCCTCTTGCCTC
CGACCTTCTGAGCCTAGGCCACGCTATGGTACGACAACCAAAGCTTGCAC
CCGATACATGAGTACGCATTCACGTCTCACGCATCTCCCCGCTCATTCGC
CCTCTTCCTAAGCCAGGCTGCTTAACCGAGGAACCTCCTCCGGCGCCTCA
AACGCTATCCCCGGGCCTTTCGCCTCCCCCCCGTGTCATCCCTACCCCTC
TACCAGCCCACCTTCTCCTCCCATTTCTCTCCACGACAATCCAGAGCCAT
GGCACGCAATGAAGAAAAGGCACAGGCCATGCTTAATAAATGGCTGACCA
TGAAGAAGGACCTCGCCACCGGTGCGTCAACAGGCCGGCAGAGAGGAGGG
AAAAGGAGGGAGGGAGGTGATGAGAATAGCGTGTCATCCCATCCATCTCA
ACTCTCTCCTCTCCCATCTCGTATGCTCACACAGGAGATAAGGAACGACG
GCCTTTTTTATCTTCGGACTGCCACACGCTGCCGGAGGCGGAGCGATGGC
GGCGGCAGATCATCAAGGTAAGGAAGGAAGGCAGGAAGGAGGGATGGAGA
GAGGGAGGCTGGAAGGGATGATGGGAGCAGTGTGTTGGGGGGCTCAGAGA
ATGCTGATGAGCAATAGAGCAGCTCGTATGGATAAAGGTCGTTACAGACC
TATGTGTTGTGAATCTATAGAGAGGTGTCCCGCAGCAGGCTGGGAGTACA
GGCCGAGATGATTGTAGTCCTCCCTCCCTGCCTCCCATCCCACTCACCCT
CCCTCCCTCCCCTCCCCCTCCCACAGGAAGTCTCCAAGAAGGTCACCGAG
ATCCAAAACGCGGGCCTCGGGGAACACCGCCTTCGGGATTTGAACGACCA
GATTAATAAACTACTCCGTGAGAAATATCACTGGCAAAGGCGGATCAAGG
AGCTAGGTAAATGCCCTCCCTCCCTCCTTCCCTCCCTCCCTCATTCTGTC
TCGATAGCTTGGACTCTTCCTTTCGCATCATTCGTCATCTATCCCCTTTA
CTCAAAACGAACCGACCCCTCCCATGTCTTCCCTCCTTCCCTCCCTCCCT
CCTTCCCCCTCTTCCTCCTCTCCTTTCGCATATCCTCCTTCACGAAGCCG
TACGCATGCATATACATATGCACACTCCTAACACTCTCCTTCCCTCCCTC
CCTCCCTCCATCCAGGTGGGCCAGACTACAACAGGATCGAGCCGCGGGCC
TTCGACGCGGACGGTCGGGAGCTACCCGGAGGAGGAGGATACAAGTATTT
CGGGGCTGCCAAGGTGTGTGTACAATATGTGTGGTAGCCCCCCCTCCCTC
CCTTCCTCTTCCCTCCCTTCATCCCTTCCTCTTCTTTTCCATTCATCTTC
GTTCTATACTGAAGGCGTCTCATTCATTCTTTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCAGGACCTCCCGGGCGTCAAGGAGCTCT
TCCAAAAGTCGGCCCCGAAGGAAATGAGACGGACCCGAGGCGATATGTAC
AAGGGAATCGACCCCGACTACTACGGCTACAGGTATATACACCCTCCCCT
CCTCCCTCCCTTCCTCCCTCCCTTCCTCCCCCTTCCATCCTCTGACCTTC
TTCCCTCCCTCCTTCCGCAGAGACGAAGACGACGGCGTTCTACTCAAAAA
GGAGGCTGAGGTGGAAAAGATTGCGGTAGCCGCTGCCGTGCGTGCCTTCA
AACGACCCCGGCAGGAGGATGCGAAGGAGCAGCAGCAGCAGCAGCAGCAG
CTGCAGGAGGAGGAGGAAGAGGAGGGCGAGGAGGAGGAACGCTTGCTAGC
CCAGTCCTTGGCTGCGGCGACGGGAACGAAGGCGGGGGGAGCAGCAGCGA
GTGCAGCGACGAGTGCGGCGGTCAAAGCGCACGTGCCCGTGCCGAGGCAG
GAAGATATCCAAGCAGCATTAATGGAGAAGAAAAAGAGGGCCTTGATGTC
CAAGTATGTGTAGATGGGGGGGAAGGAGATAGGGAGG back to topCoding sequence (CDS) from alignment at scaffold_32:198976..201012- >mRNA_9821 ID=mRNA_9821|Name=jgi.p|Nanoce1779_2|262936|organism=Nannochloropsis oceanica|type=CDS|length=5004bp|location=Sequence derived from alignment at scaffold_32:198976..201012- (Nannochloropsis oceanica)
AGACGAAGACGACGGCGTTCTACTCAAAAAGGAGGCTGAGGTGGAAAAGA
TTGCGGTAGCCGCTGCCGTGCGTGCCTTCAAACGACCCCGGCAGGAGGAT
GCGAAGGAGCAGCAGCAGCAGCAGCAGCAGCTGCAGGAGGAGGAGGAAGA
GGAGGGCGAGGAGGAGGAACGCTTGCTAGCCCAGTCCTTGGCTGCGGCGA
CGGGAACGAAGGCGGGGGGAGCAGCAGCGAGTGCAGCGACGAGTGCGGCG
GTCAAAGCGCACGTGCCCGTGCCGAGGCAGGAAGATATCCAAGCAGCATT
AATGGAGAAGAAAAAGAGGGCCTTGATGTCCAAGTATGTGTAGGACCTCC
CGGGCGTCAAGGAGCTCTTCCAAAAGTCGGCCCCGAAGGAAATGAGACGG
ACCCGAGGCGATATGTACAAGGGAATCGACCCCGACTACTACGGCTACAG
GTGGGCCAGACTACAACAGGATCGAGCCGCGGGCCTTCGACGCGGACGGT
CGGGAGCTACCCGGAGGAGGAGGATACAAGTATTTCGGGGCTGCCAAGGA
AGTCTCCAAGAAGGTCACCGAGATCCAAAACGCGGGCCTCGGGGAACACC
GCCTTCGGGATTTGAACGACCAGATTAATAAACTACTCCGTGAGAAATAT
CACTGGCAAAGGCGGATCAAGGAGCTAGGAGATAAGGAACGACGGCCTTT
TTTATCTTCGGACTGCCACACGCTGCCGGAGGCGGAGCGATGGCGGCGGC
AGATCATCAAGATGGCACGCAATGAAGAAAAGGCACAGGCCATGCTTAAT
AAATGGCTGACCATGAAGAAGGACCTCGCCACCGAGACGAAGACGACGGC
GTTCTACTCAAAAAGGAGGCTGAGGTGGAAAAGATTGCGGTAGCCGCTGC
CGTGCGTGCCTTCAAACGACCCCGGCAGGAGGATGCGAAGGAGCAGCAGC
AGCAGCAGCAGCAGCTGCAGGAGGAGGAGGAAGAGGAGGGCGAGGAGGAG
GAACGCTTGCTAGCCCAGTCCTTGGCTGCGGCGACGGGAACGAAGGCGGG
GGGAGCAGCAGCGAGTGCAGCGACGAGTGCGGCGGTCAAAGCGCACGTGC
CCGTGCCGAGGCAGGAAGATATCCAAGCAGCATTAATGGAGAAGAAAAAG
AGGGCCTTGATGTCCAAGTATGTGTAGGACCTCCCGGGCGTCAAGGAGCT
CTTCCAAAAGTCGGCCCCGAAGGAAATGAGACGGACCCGAGGCGATATGT
ACAAGGGAATCGACCCCGACTACTACGGCTACAGGTGGGCCAGACTACAA
CAGGATCGAGCCGCGGGCCTTCGACGCGGACGGTCGGGAGCTACCCGGAG
GAGGAGGATACAAGTATTTCGGGGCTGCCAAGGAAGTCTCCAAGAAGGTC
ACCGAGATCCAAAACGCGGGCCTCGGGGAACACCGCCTTCGGGATTTGAA
CGACCAGATTAATAAACTACTCCGTGAGAAATATCACTGGCAAAGGCGGA
TCAAGGAGCTAGGAGATAAGGAACGACGGCCTTTTTTATCTTCGGACTGC
CACACGCTGCCGGAGGCGGAGCGATGGCGGCGGCAGATCATCAAGATGGC
ACGCAATGAAGAAAAGGCACAGGCCATGCTTAATAAATGGCTGACCATGA
AGAAGGACCTCGCCACCGAGACGAAGACGACGGCGTTCTACTCAAAAAGG
AGGCTGAGGTGGAAAAGATTGCGGTAGCCGCTGCCGTGCGTGCCTTCAAA
CGACCCCGGCAGGAGGATGCGAAGGAGCAGCAGCAGCAGCAGCAGCAGCT
GCAGGAGGAGGAGGAAGAGGAGGGCGAGGAGGAGGAACGCTTGCTAGCCC
AGTCCTTGGCTGCGGCGACGGGAACGAAGGCGGGGGGAGCAGCAGCGAGT
GCAGCGACGAGTGCGGCGGTCAAAGCGCACGTGCCCGTGCCGAGGCAGGA
AGATATCCAAGCAGCATTAATGGAGAAGAAAAAGAGGGCCTTGATGTCCA
AGTATGTGTAGGACCTCCCGGGCGTCAAGGAGCTCTTCCAAAAGTCGGCC
CCGAAGGAAATGAGACGGACCCGAGGCGATATGTACAAGGGAATCGACCC
CGACTACTACGGCTACAGGTGGGCCAGACTACAACAGGATCGAGCCGCGG
GCCTTCGACGCGGACGGTCGGGAGCTACCCGGAGGAGGAGGATACAAGTA
TTTCGGGGCTGCCAAGGAAGTCTCCAAGAAGGTCACCGAGATCCAAAACG
CGGGCCTCGGGGAACACCGCCTTCGGGATTTGAACGACCAGATTAATAAA
CTACTCCGTGAGAAATATCACTGGCAAAGGCGGATCAAGGAGCTAGGAGA
TAAGGAACGACGGCCTTTTTTATCTTCGGACTGCCACACGCTGCCGGAGG
CGGAGCGATGGCGGCGGCAGATCATCAAGATGGCACGCAATGAAGAAAAG
GCACAGGCCATGCTTAATAAATGGCTGACCATGAAGAAGGACCTCGCCAC
CGAGACGAAGACGACGGCGTTCTACTCAAAAAGGAGGCTGAGGTGGAAAA
GATTGCGGTAGCCGCTGCCGTGCGTGCCTTCAAACGACCCCGGCAGGAGG
ATGCGAAGGAGCAGCAGCAGCAGCAGCAGCAGCTGCAGGAGGAGGAGGAA
GAGGAGGGCGAGGAGGAGGAACGCTTGCTAGCCCAGTCCTTGGCTGCGGC
GACGGGAACGAAGGCGGGGGGAGCAGCAGCGAGTGCAGCGACGAGTGCGG
CGGTCAAAGCGCACGTGCCCGTGCCGAGGCAGGAAGATATCCAAGCAGCA
TTAATGGAGAAGAAAAAGAGGGCCTTGATGTCCAAGTATGTGTAGGACCT
CCCGGGCGTCAAGGAGCTCTTCCAAAAGTCGGCCCCGAAGGAAATGAGAC
GGACCCGAGGCGATATGTACAAGGGAATCGACCCCGACTACTACGGCTAC
AGGTGGGCCAGACTACAACAGGATCGAGCCGCGGGCCTTCGACGCGGACG
GTCGGGAGCTACCCGGAGGAGGAGGATACAAGTATTTCGGGGCTGCCAAG
GAAGTCTCCAAGAAGGTCACCGAGATCCAAAACGCGGGCCTCGGGGAACA
CCGCCTTCGGGATTTGAACGACCAGATTAATAAACTACTCCGTGAGAAAT
ATCACTGGCAAAGGCGGATCAAGGAGCTAGGAGATAAGGAACGACGGCCT
TTTTTATCTTCGGACTGCCACACGCTGCCGGAGGCGGAGCGATGGCGGCG
GCAGATCATCAAGATGGCACGCAATGAAGAAAAGGCACAGGCCATGCTTA
ATAAATGGCTGACCATGAAGAAGGACCTCGCCACCGAGACGAAGACGACG
GCGTTCTACTCAAAAAGGAGGCTGAGGTGGAAAAGATTGCGGTAGCCGCT
GCCGTGCGTGCCTTCAAACGACCCCGGCAGGAGGATGCGAAGGAGCAGCA
GCAGCAGCAGCAGCAGCTGCAGGAGGAGGAGGAAGAGGAGGGCGAGGAGG
AGGAACGCTTGCTAGCCCAGTCCTTGGCTGCGGCGACGGGAACGAAGGCG
GGGGGAGCAGCAGCGAGTGCAGCGACGAGTGCGGCGGTCAAAGCGCACGT
GCCCGTGCCGAGGCAGGAAGATATCCAAGCAGCATTAATGGAGAAGAAAA
AGAGGGCCTTGATGTCCAAGTATGTGTAGGACCTCCCGGGCGTCAAGGAG
CTCTTCCAAAAGTCGGCCCCGAAGGAAATGAGACGGACCCGAGGCGATAT
GTACAAGGGAATCGACCCCGACTACTACGGCTACAGGTGGGCCAGACTAC
AACAGGATCGAGCCGCGGGCCTTCGACGCGGACGGTCGGGAGCTACCCGG
AGGAGGAGGATACAAGTATTTCGGGGCTGCCAAGGAAGTCTCCAAGAAGG
TCACCGAGATCCAAAACGCGGGCCTCGGGGAACACCGCCTTCGGGATTTG
AACGACCAGATTAATAAACTACTCCGTGAGAAATATCACTGGCAAAGGCG
GATCAAGGAGCTAGGAGATAAGGAACGACGGCCTTTTTTATCTTCGGACT
GCCACACGCTGCCGGAGGCGGAGCGATGGCGGCGGCAGATCATCAAGATG
GCACGCAATGAAGAAAAGGCACAGGCCATGCTTAATAAATGGCTGACCAT
GAAGAAGGACCTCGCCACCGAGACGAAGACGACGGCGTTCTACTCAAAAA
GGAGGCTGAGGTGGAAAAGATTGCGGTAGCCGCTGCCGTGCGTGCCTTCA
AACGACCCCGGCAGGAGGATGCGAAGGAGCAGCAGCAGCAGCAGCAGCAG
CTGCAGGAGGAGGAGGAAGAGGAGGGCGAGGAGGAGGAACGCTTGCTAGC
CCAGTCCTTGGCTGCGGCGACGGGAACGAAGGCGGGGGGAGCAGCAGCGA
GTGCAGCGACGAGTGCGGCGGTCAAAGCGCACGTGCCCGTGCCGAGGCAG
GAAGATATCCAAGCAGCATTAATGGAGAAGAAAAAGAGGGCCTTGATGTC
CAAGTATGTGTAGGACCTCCCGGGCGTCAAGGAGCTCTTCCAAAAGTCGG
CCCCGAAGGAAATGAGACGGACCCGAGGCGATATGTACAAGGGAATCGAC
CCCGACTACTACGGCTACAGGTGGGCCAGACTACAACAGGATCGAGCCGC
GGGCCTTCGACGCGGACGGTCGGGAGCTACCCGGAGGAGGAGGATACAAG
TATTTCGGGGCTGCCAAGGAAGTCTCCAAGAAGGTCACCGAGATCCAAAA
CGCGGGCCTCGGGGAACACCGCCTTCGGGATTTGAACGACCAGATTAATA
AACTACTCCGTGAGAAATATCACTGGCAAAGGCGGATCAAGGAGCTAGGA
GATAAGGAACGACGGCCTTTTTTATCTTCGGACTGCCACACGCTGCCGGA
GGCGGAGCGATGGCGGCGGCAGATCATCAAGATGGCACGCAATGAAGAAA
AGGCACAGGCCATGCTTAATAAATGGCTGACCATGAAGAAGGACCTCGCC
ACCG back to top
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