|
Properties
Property Name | Value |
TranscriptId | 673978 |
Track | FilteredModels2 |
ProteinId | 673892 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_32 | supercontig | scaffold_32:88756..91195 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9795 ID=mRNA_9795|Name=jgi.p|Nanoce1779_2|673892|organism=Nannochloropsis oceanica|type=mRNA|length=1836bp GCTTCGAGTAGCATCTACGTCGCCTTTGTGCACCAAATGTTACGCATATT GGATTTGCAGCTGAGAAAGCATCCATTATTCCCTGGAGAATTTTCTTGGT ATCATCTTGAAAGCTTGCCATTTCAACCGATAAATCATGCAGTTACGATG CTACAACTGGCAGACACCTCGTACGCGAGCCGCAATTACCAGAAAGCAGT GCTTCTATACCATGAAGCTCAGAAGGCGGCCATTAAAACCAACAACGACG AAAATTTGTACTATAGTCTCTACAAATTGTCACAATGCCACATGACACTC AACAACACAAAAGCGGCTATTCATTACGCCCAGAGGGCTTTTGAGGTCCA TCCCCAAGCCGAGCCCATGTTCCGTGTGGCCCAATTTCTCGACGGTCAAG AGAAGGAGAAACAACAACTCAGTCGAGACTTTTATTATGTCGCCTGTCGC ACATCTTCTAGCCACCCGTCTAGTGCTTTGGAACGAAAATTTTCCGAAGA ATTGCGCGTTATAGATAAATCAAGATTGTGGGCCCGACAATTCCCTCGAG AGTATTTGACCAAGCTTGCATCGCTTGAAGCGATTATGAACGATGAGGAT GCGTCTATTGAGACTCATGAGCAGGTGCATTGGGAGATGATTGCAAGTAC ACGAGCAATTCTAGGTTGCTCACAAGAACTTTTTCGAAGAGAAGGTATAT TTCACAACAGCAGCAGTTATTATTACGCAACACCATCTCTGATCCGTCGC CGAGAAGAGCACAGCGGCAGTGACAGCGCAAAGCAGGAAACTGATGCAGA GTATCTAATTTTGGTAAGGCTCCTCAACTACCGCATCGACCGCGAAGGTA GATGGTACAAAGACTTTCTACCTGCGAACCAAAATTCGGGCGTGTTGCGG AGTGCATCAGCTTTGTTTTTGAACACCACAGATAATGGTAGCATCCTTCG GGTACTCGATGGCCGTTATGAAAAATCTCTAACACGTTTCATGGGAACAG AGGATCCGAAGTTGCTGGCGATGATGGATGGCACGATTCGCATAATTTGG ACAAGTTGGGAATATGCCAAGGCTGCAGGGGGAGGATCCCGACTGGTTAT GGGCACTTTGGATATAGATTCCCTAACGATTTACTTAGATCACGTGTTTC CCAGCCCCTTTGATCACTTTAATGAGAAAAATTGGGTAGCCTTCCAGCGG CCGGGCTGCAATGACCTTTACTTTATCTACGAGTGGTATCCCTTGAGAAT AGGAAGTCTGGACGTACAGAGCGGCACCATTCACTTTAACATAACGATTT CTACACCTCGAAGCTTCCATCATCTCCGAGGCTCCTCTAACGGAGTCATC CACGACAACGATATTTGGCTGATCACACACGGTACCACGTGGCATGAAGG GCCGGGCCCTATTTATTACCACCGTGTTGTGGTATTGGATTCAGAGACGT TCGAGGTGAAGCGCTATACGTACCCTTTTAAATTGGAATCCACCGAGGCC CCCATTGAATTTTCGCTTGGACTTGATATTGACCATCTGGGAAACGTGAC GATTGCTTACAGTGTATTTGATGGATCCGCGGTATTGCGTCGCATTCCCA TTTGGAAATTGGAGGCACTGATGGTGCTGAAGGCCAAAATTACCAAGACG CCAGGAACGTACCAATTATTGCTTTTTCCTCCCTGGACAACTCCGCGATT TGTGCAAGCCGGAAACGACCACGATATGTTCGATCCTTTGGAATATCGTC CGAATATACTTTTTGTGTCTTTATCTGAGGTGTTGTGTTTGGTCTTTTAC CAAAGCTCGAGAGAACTGGGTGTTCTACTTGGGTGA back to topprotein sequence of jgi.p|Nanoce1779_2|673892 >mRNA_9795-protein ID=mRNA_9795-protein|Name=jgi.p|Nanoce1779_2|673892|organism=Nannochloropsis oceanica|type=polypeptide|length=600bp MLRILDLQLRKHPLFPGEFSWYHLESLPFQPINHAVTMLQLADTSYASRN YQKAVLLYHEAQKAAIKTNNDENLYYSLYKLSQCHMTLNNTKAAIHYAQR AFEVHPQAEPMFRVAQFLDGQEKEKQQLSRDFYYVACRTSSSHPSSALER KFSEELRVIDKSRLWARQFPREYLTKLASLEAIMNDEDASIETHEQVHWE MIASTRAILGCSQELFRREGIFHNSSSYYYATPSLIRRREEHSGSDSAKQ ETDAEYLILVRLLNYRIDREGRWYKDFLPANQNSGVLRSASALFLNTTDN GSILRVLDGRYEKSLTRFMGTEDPKLLAMMDGTIRIIWTSWEYAKAAGGG SRLVMGTLDIDSLTIYLDHVFPSPFDHFNEKNWVAFQRPGCNDLYFIYEW YPLRIGSLDVQSGTIHFNITISTPRSFHHLRGSSNGVIHDNDIWLITHGT TWHEGPGPIYYHRVVVLDSETFEVKRYTYPFKLESTEAPIEFSLGLDIDH LGNVTIAYSVFDGSAVLRRIPIWKLEALMVLKAKITKTPGTYQLLLFPPW TTPRFVQAGNDHDMFDPLEYRPNILFVSLSEVLCLVFYQSSRELGVLLG* back to topmRNA from alignment at scaffold_32:88756..91195- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9795 ID=mRNA_9795|Name=jgi.p|Nanoce1779_2|673892|organism=Nannochloropsis oceanica|type=mRNA|length=2440bp|location=Sequence derived from alignment at scaffold_32:88756..91195- (Nannochloropsis oceanica) GCTTCGAGTAGCATCTACGTCGCCTTTGTGCACCAAATGTTACGCATATT
GGATTTGCAGCTGAGAAAGCATCCATTATTCCCTGGAGAATTTTCTTGGT
ATCATCTTGAAAGCTTGCCATTTCAACCGATAAATCATGCAGTTACGATG
CTACAACTGGCAGACACCTCGTACGCGAGCCGCAATTACCAGAAAGCAGT
GCTTCTATACCATGAAGCTCAGAAGGCGGCCATTAAAACCAACAACGACG
AAAATTTGTACTATAGTCTCTACAAATTGTCACAATGCCACATGACACTC
AACAACACAAAAGCGGCTATTCATTACGCCCAGAGGGCTTTTGAGGTCCA
TCCCCAAGCCGAGCCCATGTTCCGTGTGGCCCAATTTCTCGACGGTCAAG
AGAAGGAGAAACAACAACTCAGTCGAGACTTTTATTATGTCGCCTGTCGC
ACATCTTCTAGCCACCCGTCTAGTGCTTTGGAACGAAAATTTTCCGAAGA
ATTGCGCGTTATAGATAAATCAAGATTGTGGGCCCGACAATTCCCTCGAG
AGTATTTGACCAAGCTTGCATCGCTTGAAGCGATTATGAACGATGAGGAT
GCGTCTATTGAGACTCATGAGCAGGTGCATTGGGAGATGATTGCAAGTAC
ACGAGCAATTCTAGGTTGCTCACAAGAACTTTTTCGAAGAGAAGGTATAT
TTCACAACAGCAGCAGTTATTATTACGCAACACCATCTCTGATCCGTCGC
CGAGAAGAGCACAGCGGCAGTGACAGCGCAAAGCAGGAAACTGATGCAGA
GTATCTAATTTTGGTAAGGCTCCTCAACTACCGCATCGACCGCGAAGGTA
GATGGTACAAAGACTTTCTACCTGCGAACCAAAATTCGGGCGTGTTGCGG
AGTGCATCAGCTTTGTTTTTGAACACCACAGATAATGGTAGCATCCTTCG
GGTACTCGATGGCCGTTATGAAAAATCTCTAACACGTTTCATGGGAACAG
AGGATCCGAAGTTGCTGGCGATGATGGATGGCACGATTCGCATAATTTGG
ACAAGTTGGGAATATGCCAAGGCTGCAGGGGGAGGATCCCGACTGGTTAT
GGGCACTTTGGATATAGATTCCCTAACGATTTACTTAGATCACGTGTTTC
CCAGCCCCTTTGATCACTTTAATGAGAAAAATTGGGTAGCCTTCCAGCGG
CCGGGCTGCAATGACCTTTACTTTATCTACGAGTGGTATCCCTTGAGAAT
AGGAAGTCTGGACGTACAGAGCGGCACCATTCACTTTAACATAACGATTT
CTACACCTCGAAGCTTCCATCATCTCCGAGGCTCCTCTAACGGAGTCATC
CACGACAACGATATTTGGCTGATCACACACGGTACCACGTGGCATGAAGG
GCCGGGCCCTATTTATTACCACCGTGTTGTGGTATTGGATTCAGAGACGT
TCGAGGTGAAGCGCTATACGTACCCTTTTAAATTGGAATCCACCGAGGCC
CCCATTGAATTTTCGCTTGGACTTGATATTGACCATCTGGGAAACGTGAC
GATTGCTTACAGTGTATTTGATGGATCCGCGGTATTGCGTCGCATTCCCA
TTTGGAAATTGGAGGCACTGATGGTGGTATCGCATGGAAAACTTATATGA
AGTTAGCTTTATTTTCTTTTATCAAACAAAGTAGATACGCGAAAGATTGA
AACACTCACCCAGAGCGCTCCTACAAAATTTTGAAAGATGTTCCATTCAG
CGCCCCACTGACACTTATAATATCATCTGTAACACGCTCGACAAGGTTGG
AGTAGAAAACAGGCTTCCCAAAAATACTTTTCACATTTCTGTTTTTTGGC
CGATAATGTAACCTCCCCACCCACCTCGAGCTGAAGGCCAAAATTACCAA
GACGCCAGGAACGTACCAATTATTGCTTTTTCCTCCCTGGACAAGTTTGT
TCAGATATATTCTGTATATGATGTCAATGCTGTCCTCTCTTCCTCCATAA
ATATGCACATTATCTGGCCCTGACCATCCAAATCACTATTTTTGATCTTC
TTCGCATAGTTCTCTACCCTCTCGAGATCATCAGCATGCTTACTGTAAAG
TGGAGTGTCATTGCCTTCACTGCACTACCTCCACGTTTTGGGCATGTCTT
TTCATCCCGACAGCAAGTAAGTGCTGATTCAAAGAGCCACTCTCTCTCTT
TTTCGACCTCTTGTACACAGTACACAAGAAACTTCCCCGCGGTCTTCCTC
GCCCTTGACTGCATCCTCCCTCCCAACGCGCGCTGCTTCAACAGCTCCGC
GATTTGTGCAAGCCGGAAACGACCACGATATGTTCGATCCTTTGGAATAT
CGTCCGAATATACTTTTTGTGTCTTTATCTGAGGTGTTGTGTTTGGTCTT
TTACCAAAGCTCGAGAGAACTGGGTGTTCTACTTGGGTGA back to topCoding sequence (CDS) from alignment at scaffold_32:88756..91195- >mRNA_9795 ID=mRNA_9795|Name=jgi.p|Nanoce1779_2|673892|organism=Nannochloropsis oceanica|type=CDS|length=5400bp|location=Sequence derived from alignment at scaffold_32:88756..91195- (Nannochloropsis oceanica) CTCCGCGATTTGTGCAAGCCGGAAACGACCACGATATGTTCGATCCTTTG GAATATCGTCCGAATATACTTTTTGTGTCTTTATCTGAGGTGTTGTGTTT GGTCTTTTACCAAAGCTCGAGAGAACTGGGTGTTCTACTTGGGTGACTGA AGGCCAAAATTACCAAGACGCCAGGAACGTACCAATTATTGCTTTTTCCT CCCTGGACAAATGTTACGCATATTGGATTTGCAGCTGAGAAAGCATCCAT TATTCCCTGGAGAATTTTCTTGGTATCATCTTGAAAGCTTGCCATTTCAA CCGATAAATCATGCAGTTACGATGCTACAACTGGCAGACACCTCGTACGC GAGCCGCAATTACCAGAAAGCAGTGCTTCTATACCATGAAGCTCAGAAGG CGGCCATTAAAACCAACAACGACGAAAATTTGTACTATAGTCTCTACAAA TTGTCACAATGCCACATGACACTCAACAACACAAAAGCGGCTATTCATTA CGCCCAGAGGGCTTTTGAGGTCCATCCCCAAGCCGAGCCCATGTTCCGTG TGGCCCAATTTCTCGACGGTCAAGAGAAGGAGAAACAACAACTCAGTCGA GACTTTTATTATGTCGCCTGTCGCACATCTTCTAGCCACCCGTCTAGTGC TTTGGAACGAAAATTTTCCGAAGAATTGCGCGTTATAGATAAATCAAGAT TGTGGGCCCGACAATTCCCTCGAGAGTATTTGACCAAGCTTGCATCGCTT GAAGCGATTATGAACGATGAGGATGCGTCTATTGAGACTCATGAGCAGGT GCATTGGGAGATGATTGCAAGTACACGAGCAATTCTAGGTTGCTCACAAG AACTTTTTCGAAGAGAAGGTATATTTCACAACAGCAGCAGTTATTATTAC GCAACACCATCTCTGATCCGTCGCCGAGAAGAGCACAGCGGCAGTGACAG CGCAAAGCAGGAAACTGATGCAGAGTATCTAATTTTGGTAAGGCTCCTCA ACTACCGCATCGACCGCGAAGGTAGATGGTACAAAGACTTTCTACCTGCG AACCAAAATTCGGGCGTGTTGCGGAGTGCATCAGCTTTGTTTTTGAACAC CACAGATAATGGTAGCATCCTTCGGGTACTCGATGGCCGTTATGAAAAAT CTCTAACACGTTTCATGGGAACAGAGGATCCGAAGTTGCTGGCGATGATG GATGGCACGATTCGCATAATTTGGACAAGTTGGGAATATGCCAAGGCTGC AGGGGGAGGATCCCGACTGGTTATGGGCACTTTGGATATAGATTCCCTAA CGATTTACTTAGATCACGTGTTTCCCAGCCCCTTTGATCACTTTAATGAG AAAAATTGGGTAGCCTTCCAGCGGCCGGGCTGCAATGACCTTTACTTTAT CTACGAGTGGTATCCCTTGAGAATAGGAAGTCTGGACGTACAGAGCGGCA CCATTCACTTTAACATAACGATTTCTACACCTCGAAGCTTCCATCATCTC CGAGGCTCCTCTAACGGAGTCATCCACGACAACGATATTTGGCTGATCAC ACACGGTACCACGTGGCATGAAGGGCCGGGCCCTATTTATTACCACCGTG TTGTGGTATTGGATTCAGAGACGTTCGAGGTGAAGCGCTATACGTACCCT TTTAAATTGGAATCCACCGAGGCCCCCATTGAATTTTCGCTTGGACTTGA TATTGACCATCTGGGAAACGTGACGATTGCTTACAGTGTATTTGATGGAT CCGCGGTATTGCGTCGCATTCCCATTTGGAAATTGGAGGCACTGATGGTG CTCCGCGATTTGTGCAAGCCGGAAACGACCACGATATGTTCGATCCTTTG GAATATCGTCCGAATATACTTTTTGTGTCTTTATCTGAGGTGTTGTGTTT GGTCTTTTACCAAAGCTCGAGAGAACTGGGTGTTCTACTTGGGTGACTGA AGGCCAAAATTACCAAGACGCCAGGAACGTACCAATTATTGCTTTTTCCT CCCTGGACAAATGTTACGCATATTGGATTTGCAGCTGAGAAAGCATCCAT TATTCCCTGGAGAATTTTCTTGGTATCATCTTGAAAGCTTGCCATTTCAA CCGATAAATCATGCAGTTACGATGCTACAACTGGCAGACACCTCGTACGC GAGCCGCAATTACCAGAAAGCAGTGCTTCTATACCATGAAGCTCAGAAGG CGGCCATTAAAACCAACAACGACGAAAATTTGTACTATAGTCTCTACAAA TTGTCACAATGCCACATGACACTCAACAACACAAAAGCGGCTATTCATTA CGCCCAGAGGGCTTTTGAGGTCCATCCCCAAGCCGAGCCCATGTTCCGTG TGGCCCAATTTCTCGACGGTCAAGAGAAGGAGAAACAACAACTCAGTCGA GACTTTTATTATGTCGCCTGTCGCACATCTTCTAGCCACCCGTCTAGTGC TTTGGAACGAAAATTTTCCGAAGAATTGCGCGTTATAGATAAATCAAGAT TGTGGGCCCGACAATTCCCTCGAGAGTATTTGACCAAGCTTGCATCGCTT GAAGCGATTATGAACGATGAGGATGCGTCTATTGAGACTCATGAGCAGGT GCATTGGGAGATGATTGCAAGTACACGAGCAATTCTAGGTTGCTCACAAG AACTTTTTCGAAGAGAAGGTATATTTCACAACAGCAGCAGTTATTATTAC GCAACACCATCTCTGATCCGTCGCCGAGAAGAGCACAGCGGCAGTGACAG CGCAAAGCAGGAAACTGATGCAGAGTATCTAATTTTGGTAAGGCTCCTCA ACTACCGCATCGACCGCGAAGGTAGATGGTACAAAGACTTTCTACCTGCG AACCAAAATTCGGGCGTGTTGCGGAGTGCATCAGCTTTGTTTTTGAACAC CACAGATAATGGTAGCATCCTTCGGGTACTCGATGGCCGTTATGAAAAAT CTCTAACACGTTTCATGGGAACAGAGGATCCGAAGTTGCTGGCGATGATG GATGGCACGATTCGCATAATTTGGACAAGTTGGGAATATGCCAAGGCTGC AGGGGGAGGATCCCGACTGGTTATGGGCACTTTGGATATAGATTCCCTAA CGATTTACTTAGATCACGTGTTTCCCAGCCCCTTTGATCACTTTAATGAG AAAAATTGGGTAGCCTTCCAGCGGCCGGGCTGCAATGACCTTTACTTTAT CTACGAGTGGTATCCCTTGAGAATAGGAAGTCTGGACGTACAGAGCGGCA CCATTCACTTTAACATAACGATTTCTACACCTCGAAGCTTCCATCATCTC CGAGGCTCCTCTAACGGAGTCATCCACGACAACGATATTTGGCTGATCAC ACACGGTACCACGTGGCATGAAGGGCCGGGCCCTATTTATTACCACCGTG TTGTGGTATTGGATTCAGAGACGTTCGAGGTGAAGCGCTATACGTACCCT TTTAAATTGGAATCCACCGAGGCCCCCATTGAATTTTCGCTTGGACTTGA TATTGACCATCTGGGAAACGTGACGATTGCTTACAGTGTATTTGATGGAT CCGCGGTATTGCGTCGCATTCCCATTTGGAAATTGGAGGCACTGATGGTG CTCCGCGATTTGTGCAAGCCGGAAACGACCACGATATGTTCGATCCTTTG GAATATCGTCCGAATATACTTTTTGTGTCTTTATCTGAGGTGTTGTGTTT GGTCTTTTACCAAAGCTCGAGAGAACTGGGTGTTCTACTTGGGTGACTGA AGGCCAAAATTACCAAGACGCCAGGAACGTACCAATTATTGCTTTTTCCT CCCTGGACAAATGTTACGCATATTGGATTTGCAGCTGAGAAAGCATCCAT TATTCCCTGGAGAATTTTCTTGGTATCATCTTGAAAGCTTGCCATTTCAA CCGATAAATCATGCAGTTACGATGCTACAACTGGCAGACACCTCGTACGC GAGCCGCAATTACCAGAAAGCAGTGCTTCTATACCATGAAGCTCAGAAGG CGGCCATTAAAACCAACAACGACGAAAATTTGTACTATAGTCTCTACAAA TTGTCACAATGCCACATGACACTCAACAACACAAAAGCGGCTATTCATTA CGCCCAGAGGGCTTTTGAGGTCCATCCCCAAGCCGAGCCCATGTTCCGTG TGGCCCAATTTCTCGACGGTCAAGAGAAGGAGAAACAACAACTCAGTCGA GACTTTTATTATGTCGCCTGTCGCACATCTTCTAGCCACCCGTCTAGTGC TTTGGAACGAAAATTTTCCGAAGAATTGCGCGTTATAGATAAATCAAGAT TGTGGGCCCGACAATTCCCTCGAGAGTATTTGACCAAGCTTGCATCGCTT GAAGCGATTATGAACGATGAGGATGCGTCTATTGAGACTCATGAGCAGGT GCATTGGGAGATGATTGCAAGTACACGAGCAATTCTAGGTTGCTCACAAG AACTTTTTCGAAGAGAAGGTATATTTCACAACAGCAGCAGTTATTATTAC GCAACACCATCTCTGATCCGTCGCCGAGAAGAGCACAGCGGCAGTGACAG CGCAAAGCAGGAAACTGATGCAGAGTATCTAATTTTGGTAAGGCTCCTCA ACTACCGCATCGACCGCGAAGGTAGATGGTACAAAGACTTTCTACCTGCG AACCAAAATTCGGGCGTGTTGCGGAGTGCATCAGCTTTGTTTTTGAACAC CACAGATAATGGTAGCATCCTTCGGGTACTCGATGGCCGTTATGAAAAAT CTCTAACACGTTTCATGGGAACAGAGGATCCGAAGTTGCTGGCGATGATG GATGGCACGATTCGCATAATTTGGACAAGTTGGGAATATGCCAAGGCTGC AGGGGGAGGATCCCGACTGGTTATGGGCACTTTGGATATAGATTCCCTAA CGATTTACTTAGATCACGTGTTTCCCAGCCCCTTTGATCACTTTAATGAG AAAAATTGGGTAGCCTTCCAGCGGCCGGGCTGCAATGACCTTTACTTTAT CTACGAGTGGTATCCCTTGAGAATAGGAAGTCTGGACGTACAGAGCGGCA CCATTCACTTTAACATAACGATTTCTACACCTCGAAGCTTCCATCATCTC CGAGGCTCCTCTAACGGAGTCATCCACGACAACGATATTTGGCTGATCAC ACACGGTACCACGTGGCATGAAGGGCCGGGCCCTATTTATTACCACCGTG TTGTGGTATTGGATTCAGAGACGTTCGAGGTGAAGCGCTATACGTACCCT TTTAAATTGGAATCCACCGAGGCCCCCATTGAATTTTCGCTTGGACTTGA TATTGACCATCTGGGAAACGTGACGATTGCTTACAGTGTATTTGATGGAT CCGCGGTATTGCGTCGCATTCCCATTTGGAAATTGGAGGCACTGATGGTG back to top
|