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Properties
| Property Name | Value |
|---|
| TranscriptId | 147963 |
| Track | FilteredModels2 |
| ProteinId | 147877 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:912584..914499 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_978 ID=mRNA_978|Name=jgi.p|Nanoce1779_2|147877|organism=Nannochloropsis oceanica|type=mRNA|length=1505bp
ATTAACGAACTTGCCTTGCTCCTGCTTTTGCTGTCAAGGGTCGTCGTAGA
GGGATTCTTCTTCACAGGGCCGCGCAGTGTAGACCATCTTAAAGACGTAC
GAGGGTTGCAGCCGCCCCGCCCGTTTCTACTCCAGACGTCTACGAGCCTG
GGAGGTGCCTCTGCTACGTCCGTCGATGGGTAAGCCCCCTTTTCTTGTCT
TGTTTTCGTAGTCTTTTCTGATGCCTTCCGCTCACTCGCTCACATTTCAC
ACTATCTGTTACAAATCACATACATGGAGGCTGTTGCGGGACGAGAGTGC
CGACGTTACCAATGGGGACAGTCGCAGCATTAGTGTAGCGGGACCCACGA
CAGAGGGCAAGTGCAGTGGCAGAATCCTCCAAGTCATCACCGATATCGAT
GATACTGTCAAGTCCAGCGGCGGGCTGCGTCTCCTCGGGGTAGCCTTGGG
AGGGATTGACACCCAATACAAACGCGGACAGTATTACCCAGGTGCCTTCC
AGTTTGCCCTGGAGCTCTCTCGTTTCGGCGTACCTGAAGGTCGAGATCCT
GCACGTGTTGCTGTACTGACAGCGAGAGCCCGTGAATTCAAATTCGCCCT
CGAACTCAAACCCTCCCACAAAGTTTGCCGGACATATGCCGCTGCTGGGG
TTGACAATGGGGTGGATGGGTGGGGGGTCGGTACGGTGCTGTATGGTAGT
GTCAAGGAGTGGGTGTGTCAGGGTAGGAAGGGTTTAAGGAAGTTTCGCAA
TTTCGAGGCGTTGCGGAGAGAGGATCGCTTTGATTTGACGGATTATGTGT
TTGTTGGAGATACGGGGGAGTTGGATGTGCAGGCGGGTGAGAGCATGATC
AGGAAGTACCCCACCCGTATCAAGGCCCTCTTCATGCACTACGTCTCTGA
AGCCCGTCCCTCCCCCCCTCCTCCCCGCGATCGCTCCCTGCTTGATGTCC
CCGTGATTTATTTTCAGACCTATGTGGGCGCTGCTGTGAAAGCTGCCGGC
CTGGGTTTGCTGGACAGAAGAGGGGTGGAGGCAGTAATAGCTCGAGCCCT
TGATGAATTGGAGGGAGGAGGGAAAAAGGGAGAGAAAAAAGGAGGGAGAA
AGGCTACGCCGGAACAGCTGGCCGATCTGATGGCAGATATTGATCTAGCA
AAGAGGACGGTGTTAATGACCAAGGAGGAGGACGGGGGTACGGGCAAAGG
AAAGAGGGAGGGAGGGGCAGAGGAGGTGCTGGTGTTACTTCGAAAGCTGT
TTCGACCGCCGGATGTGATAGTGCCGGGGCGAATTCGTGTTCGTAAGTAA
GATCTTGTTATAGGAGGTAGGGAAGGTGTGAGGAAGATAGAGGGGAGAGC
ATGAGCGCGTGTCTACTGTGTGATTTCTGGGGAGGTATTTGGAGTGTTGA
TATATTTTCAGGGAACATAGGAAGGGAGGAAAAGAATGGAGGAAGGGTGA
AAGGCAAGTCTTAATAAATGTACATATCAATGTGATCGGTATCACCAGAA
TCGTG back to topprotein sequence of jgi.p|Nanoce1779_2|147877 >mRNA_978-protein ID=mRNA_978-protein|Name=jgi.p|Nanoce1779_2|147877|organism=Nannochloropsis oceanica|type=polypeptide|length=360bp
MPSAHSLTFHTICYKSHTWRLLRDESADVTNGDSRSISVAGPTTEGKCSG
RILQVITDIDDTVKSSGGLRLLGVALGGIDTQYKRGQYYPGAFQFALELS
RFGVPEGRDPARVAVLTARAREFKFALELKPSHKVCRTYAAAGVDNGVDG
WGVGTVLYGSVKEWVCQGRKGLRKFRNFEALRREDRFDLTDYVFVGDTGE
LDVQAGESMIRKYPTRIKALFMHYVSEARPSPPPPRDRSLLDVPVIYFQT
YVGAAVKAAGLGLLDRRGVEAVIARALDELEGGGKKGEKKGGRKATPEQL
ADLMADIDLAKRTVLMTKEEDGGTGKGKREGGAEEVLVLLRKLFRPPDVI
VPGRIRVRK* back to topmRNA from alignment at scaffold_2:912584..914499- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_978 ID=mRNA_978|Name=jgi.p|Nanoce1779_2|147877|organism=Nannochloropsis oceanica|type=mRNA|length=1916bp|location=Sequence derived from alignment at scaffold_2:912584..914499- (Nannochloropsis oceanica)
ATTAACGAACTTGCCTTGCTCCTGCTTTTGCTGTCAAGGGTCGTCGTAGA
GGGATTCTTCTTCACAGGGCCGCGCAGTGTAGACCATCTTAAAGACGTAC
GAGGGTTGCAGCCGCCCCGCCCGTTTCTACTCCAGACGTCTACGAGCCTG
GGAGGTGCCTCTGCTACGTCCGTCGATGGGTAAGCCCCCTTTTCTTGTCT
TGTTTTCGTAGTCTTTTCTGATGCCTTCCGCTCACTCGCTCACATTTCAC
ACTATCTGTTACAAATCACATACATGGAGGCTGTTGCGGGACGAGAGTGC
CGACGTTACCAATGGGGACAGTCGCAGCATTAGTGTAGCGGGACCCACGA
CAGAGGGCAAGTGCAGTGGCAGGTACGTTTTTAGGCATAGAAGGCATTTT
TCACATTCCCTCCCCTCCTCCCTTCCCTCTATTTAATCGCTACTCAAACG
CCCATCCTCTCAGAATCCTCCAAGTCATCACCGATATCGATGATACTGTC
AAGTCCAGCGGCGGGCTGCGTCTCCTCGGGGTAGCCTTGGGAGGGATTGA
CACCCAATACAAACGCGGACAGTATTACCCAGGTGCCTTCCAGTTTGCCC
TGGAGCTCTCTCGTTTCGGCGTACCTGAAGGTCGAGATCCTGCACGTGTT
GCTGTACTGACAGCGAGGTGGGTGCTTCAGCCATCTCTCCCACCTACACT
TTCCTCCTCTCTCTTTGTACGAGCCTCTGGAGACATTCCTCTATCAAGCA
CCCTCACTTAAATTCCTCTTTCTCCCCTCCCTAAAAACCAAACACAGAGC
CCGTGAATTCAAATTCGCCCTCGAACTCAAACCCTCCCACAAAGTTTGCC
GGACATATGCCGCTGCTGGGGTTGACAATGGGGTGGATGGGTGGGGGGTC
GGTACGGTGCTGTATGGTAGTGTCAAGGAGTGGGTGTGTCAGGGTAGGAA
GGGTTTAAGGAAGTTTCGCAATTTCGAGGCGTTGCGGAGAGAGGATCGCT
TTGATTTGACGGATTATGTGTTTGTTGGAGATACGGGGGAGTTGGATGTG
CAGGCGGGTGAGAGCATGATCAGGTAGGTGAGAAGGGGAGGGACGGAGAG
GGGGAGGGAGGGAGTGAGTGAGTGAGGGCTGTTTGGGTGGGTGGGTGGAG
GAATGAGAGACGTTTGGTATTTCGTGTGTGCGGCCGTAAAATTTATGTCA
CATGTATCAGGTACGTCATGGCCTGATCAACTCACACACCTACACCCTCC
TTCCCTCCGTCAGGAAGTACCCCACCCGTATCAAGGCCCTCTTCATGCAC
TACGTCTCTGAAGCCCGTCCCTCCCCCCCTCCTCCCCGCGATCGCTCCCT
GCTTGATGTCCCCGTGATTTATTTTCAGACCTATGTGGGCGCTGCTGTGA
AAGCTGCCGGCCTGGGTTTGCTGGACAGAAGAGGGGTGGAGGCAGTAATA
GCTCGAGCCCTTGATGAATTGGAGGGAGGAGGGAAAAAGGGAGAGAAAAA
AGGAGGGAGAAAGGCTACGCCGGAACAGCTGGCCGATCTGATGGCAGATA
TTGATCTAGCAAAGAGGACGGTGTTAATGACCAAGGAGGAGGACGGGGGT
ACGGGCAAAGGAAAGAGGGAGGGAGGGGCAGAGGAGGTGCTGGTGTTACT
TCGAAAGCTGTTTCGACCGCCGGATGTGATAGTGCCGGGGCGAATTCGTG
TTCGTAAGTAAGATCTTGTTATAGGAGGTAGGGAAGGTGTGAGGAAGATA
GAGGGGAGAGCATGAGCGCGTGTCTACTGTGTGATTTCTGGGGAGGTATT
TGGAGTGTTGATATATTTTCAGGGAACATAGGAAGGGAGGAAAAGAATGG
AGGAAGGGTGAAAGGCAAGTCTTAATAAATGTACATATCAATGTGATCGG
TATCACCAGAATCGTG back to topCoding sequence (CDS) from alignment at scaffold_2:912584..914499- >mRNA_978 ID=mRNA_978|Name=jgi.p|Nanoce1779_2|147877|organism=Nannochloropsis oceanica|type=CDS|length=4320bp|location=Sequence derived from alignment at scaffold_2:912584..914499- (Nannochloropsis oceanica)
GAAGTACCCCACCCGTATCAAGGCCCTCTTCATGCACTACGTCTCTGAAG
CCCGTCCCTCCCCCCCTCCTCCCCGCGATCGCTCCCTGCTTGATGTCCCC
GTGATTTATTTTCAGACCTATGTGGGCGCTGCTGTGAAAGCTGCCGGCCT
GGGTTTGCTGGACAGAAGAGGGGTGGAGGCAGTAATAGCTCGAGCCCTTG
ATGAATTGGAGGGAGGAGGGAAAAAGGGAGAGAAAAAAGGAGGGAGAAAG
GCTACGCCGGAACAGCTGGCCGATCTGATGGCAGATATTGATCTAGCAAA
GAGGACGGTGTTAATGACCAAGGAGGAGGACGGGGGTACGGGCAAAGGAA
AGAGGGAGGGAGGGGCAGAGGAGGTGCTGGTGTTACTTCGAAAGCTGTTT
CGACCGCCGGATGTGATAGTGCCGGGGCGAATTCGTGTTCGTAAGTAAAG
CCCGTGAATTCAAATTCGCCCTCGAACTCAAACCCTCCCACAAAGTTTGC
CGGACATATGCCGCTGCTGGGGTTGACAATGGGGTGGATGGGTGGGGGGT
CGGTACGGTGCTGTATGGTAGTGTCAAGGAGTGGGTGTGTCAGGGTAGGA
AGGGTTTAAGGAAGTTTCGCAATTTCGAGGCGTTGCGGAGAGAGGATCGC
TTTGATTTGACGGATTATGTGTTTGTTGGAGATACGGGGGAGTTGGATGT
GCAGGCGGGTGAGAGCATGATCAGAATCCTCCAAGTCATCACCGATATCG
ATGATACTGTCAAGTCCAGCGGCGGGCTGCGTCTCCTCGGGGTAGCCTTG
GGAGGGATTGACACCCAATACAAACGCGGACAGTATTACCCAGGTGCCTT
CCAGTTTGCCCTGGAGCTCTCTCGTTTCGGCGTACCTGAAGGTCGAGATC
CTGCACGTGTTGCTGTACTGACAGCGAGATGCCTTCCGCTCACTCGCTCA
CATTTCACACTATCTGTTACAAATCACATACATGGAGGCTGTTGCGGGAC
GAGAGTGCCGACGTTACCAATGGGGACAGTCGCAGCATTAGTGTAGCGGG
ACCCACGACAGAGGGCAAGTGCAGTGGCAGGAAGTACCCCACCCGTATCA
AGGCCCTCTTCATGCACTACGTCTCTGAAGCCCGTCCCTCCCCCCCTCCT
CCCCGCGATCGCTCCCTGCTTGATGTCCCCGTGATTTATTTTCAGACCTA
TGTGGGCGCTGCTGTGAAAGCTGCCGGCCTGGGTTTGCTGGACAGAAGAG
GGGTGGAGGCAGTAATAGCTCGAGCCCTTGATGAATTGGAGGGAGGAGGG
AAAAAGGGAGAGAAAAAAGGAGGGAGAAAGGCTACGCCGGAACAGCTGGC
CGATCTGATGGCAGATATTGATCTAGCAAAGAGGACGGTGTTAATGACCA
AGGAGGAGGACGGGGGTACGGGCAAAGGAAAGAGGGAGGGAGGGGCAGAG
GAGGTGCTGGTGTTACTTCGAAAGCTGTTTCGACCGCCGGATGTGATAGT
GCCGGGGCGAATTCGTGTTCGTAAGTAAAGCCCGTGAATTCAAATTCGCC
CTCGAACTCAAACCCTCCCACAAAGTTTGCCGGACATATGCCGCTGCTGG
GGTTGACAATGGGGTGGATGGGTGGGGGGTCGGTACGGTGCTGTATGGTA
GTGTCAAGGAGTGGGTGTGTCAGGGTAGGAAGGGTTTAAGGAAGTTTCGC
AATTTCGAGGCGTTGCGGAGAGAGGATCGCTTTGATTTGACGGATTATGT
GTTTGTTGGAGATACGGGGGAGTTGGATGTGCAGGCGGGTGAGAGCATGA
TCAGAATCCTCCAAGTCATCACCGATATCGATGATACTGTCAAGTCCAGC
GGCGGGCTGCGTCTCCTCGGGGTAGCCTTGGGAGGGATTGACACCCAATA
CAAACGCGGACAGTATTACCCAGGTGCCTTCCAGTTTGCCCTGGAGCTCT
CTCGTTTCGGCGTACCTGAAGGTCGAGATCCTGCACGTGTTGCTGTACTG
ACAGCGAGATGCCTTCCGCTCACTCGCTCACATTTCACACTATCTGTTAC
AAATCACATACATGGAGGCTGTTGCGGGACGAGAGTGCCGACGTTACCAA
TGGGGACAGTCGCAGCATTAGTGTAGCGGGACCCACGACAGAGGGCAAGT
GCAGTGGCAGGAAGTACCCCACCCGTATCAAGGCCCTCTTCATGCACTAC
GTCTCTGAAGCCCGTCCCTCCCCCCCTCCTCCCCGCGATCGCTCCCTGCT
TGATGTCCCCGTGATTTATTTTCAGACCTATGTGGGCGCTGCTGTGAAAG
CTGCCGGCCTGGGTTTGCTGGACAGAAGAGGGGTGGAGGCAGTAATAGCT
CGAGCCCTTGATGAATTGGAGGGAGGAGGGAAAAAGGGAGAGAAAAAAGG
AGGGAGAAAGGCTACGCCGGAACAGCTGGCCGATCTGATGGCAGATATTG
ATCTAGCAAAGAGGACGGTGTTAATGACCAAGGAGGAGGACGGGGGTACG
GGCAAAGGAAAGAGGGAGGGAGGGGCAGAGGAGGTGCTGGTGTTACTTCG
AAAGCTGTTTCGACCGCCGGATGTGATAGTGCCGGGGCGAATTCGTGTTC
GTAAGTAAAGCCCGTGAATTCAAATTCGCCCTCGAACTCAAACCCTCCCA
CAAAGTTTGCCGGACATATGCCGCTGCTGGGGTTGACAATGGGGTGGATG
GGTGGGGGGTCGGTACGGTGCTGTATGGTAGTGTCAAGGAGTGGGTGTGT
CAGGGTAGGAAGGGTTTAAGGAAGTTTCGCAATTTCGAGGCGTTGCGGAG
AGAGGATCGCTTTGATTTGACGGATTATGTGTTTGTTGGAGATACGGGGG
AGTTGGATGTGCAGGCGGGTGAGAGCATGATCAGAATCCTCCAAGTCATC
ACCGATATCGATGATACTGTCAAGTCCAGCGGCGGGCTGCGTCTCCTCGG
GGTAGCCTTGGGAGGGATTGACACCCAATACAAACGCGGACAGTATTACC
CAGGTGCCTTCCAGTTTGCCCTGGAGCTCTCTCGTTTCGGCGTACCTGAA
GGTCGAGATCCTGCACGTGTTGCTGTACTGACAGCGAGATGCCTTCCGCT
CACTCGCTCACATTTCACACTATCTGTTACAAATCACATACATGGAGGCT
GTTGCGGGACGAGAGTGCCGACGTTACCAATGGGGACAGTCGCAGCATTA
GTGTAGCGGGACCCACGACAGAGGGCAAGTGCAGTGGCAGGAAGTACCCC
ACCCGTATCAAGGCCCTCTTCATGCACTACGTCTCTGAAGCCCGTCCCTC
CCCCCCTCCTCCCCGCGATCGCTCCCTGCTTGATGTCCCCGTGATTTATT
TTCAGACCTATGTGGGCGCTGCTGTGAAAGCTGCCGGCCTGGGTTTGCTG
GACAGAAGAGGGGTGGAGGCAGTAATAGCTCGAGCCCTTGATGAATTGGA
GGGAGGAGGGAAAAAGGGAGAGAAAAAAGGAGGGAGAAAGGCTACGCCGG
AACAGCTGGCCGATCTGATGGCAGATATTGATCTAGCAAAGAGGACGGTG
TTAATGACCAAGGAGGAGGACGGGGGTACGGGCAAAGGAAAGAGGGAGGG
AGGGGCAGAGGAGGTGCTGGTGTTACTTCGAAAGCTGTTTCGACCGCCGG
ATGTGATAGTGCCGGGGCGAATTCGTGTTCGTAAGTAAAGCCCGTGAATT
CAAATTCGCCCTCGAACTCAAACCCTCCCACAAAGTTTGCCGGACATATG
CCGCTGCTGGGGTTGACAATGGGGTGGATGGGTGGGGGGTCGGTACGGTG
CTGTATGGTAGTGTCAAGGAGTGGGTGTGTCAGGGTAGGAAGGGTTTAAG
GAAGTTTCGCAATTTCGAGGCGTTGCGGAGAGAGGATCGCTTTGATTTGA
CGGATTATGTGTTTGTTGGAGATACGGGGGAGTTGGATGTGCAGGCGGGT
GAGAGCATGATCAGAATCCTCCAAGTCATCACCGATATCGATGATACTGT
CAAGTCCAGCGGCGGGCTGCGTCTCCTCGGGGTAGCCTTGGGAGGGATTG
ACACCCAATACAAACGCGGACAGTATTACCCAGGTGCCTTCCAGTTTGCC
CTGGAGCTCTCTCGTTTCGGCGTACCTGAAGGTCGAGATCCTGCACGTGT
TGCTGTACTGACAGCGAGATGCCTTCCGCTCACTCGCTCACATTTCACAC
TATCTGTTACAAATCACATACATGGAGGCTGTTGCGGGACGAGAGTGCCG
ACGTTACCAATGGGGACAGTCGCAGCATTAGTGTAGCGGGACCCACGACA
GAGGGCAAGTGCAGTGGCAG back to top
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