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Properties
| Property Name | Value |
|---|
| TranscriptId | 569341 |
| Track | FilteredModels2 |
| ProteinId | 569255 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_37 | supercontig | scaffold_37:155084..156993 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9765 ID=mRNA_9765|Name=jgi.p|Nanoce1779_2|569255|organism=Nannochloropsis oceanica|type=mRNA|length=1191bp
ATGGGCGTTAGACCCGCTCGCAAGCCCAACAAACTGGGCAAAATGCCCAT
TCGCATTGCTATAGGGACGGCCGCCTTTTGTGCTGGCCTCGCATTGTTGC
ACAGGCTCTGGTTGCCACCCACTCTAAAGCAAGGGGGCCTTCAAGCTTCT
AGCACTGTCGTTGTCACAACTAATGATGGTTTGCCTTCTCCTTCGTCTTC
AATCCAGATGGATTCCCCAGGCACCTTCTCATCCTCGTCTTCTTCGGGTG
TAGTACAGGAAGAAATGGTCGACAGCCTTGGGGACCATAGTGGTGACGTC
GTGATCAAGACGTTATCATCAGATTTATTGATTGATCAGAGGGGTCAAAA
GCACGTGAAGGACGAGGAGTTGCATAAGAAAGACGAGCAGGACAAAGAGA
TTGATGAGGCAGAGAAAGAGAAAGATGGAAGCCAGAAAGAAGACAAAGAG
GACGAAGACGAGCTGCGACGATTCGAAGAAGAAAATAACAAGAGACTGAT
GAATGGAGTCTGGAAAGAAGGTGAAGAGGAAGATGATGATGATTATGATG
ATGACTTCTTATCCGGAGAATGGGAAGACGCTAAGGAGGAAGACGATGAC
GAGAAGGACGAAGAGGAGGAGGACACTGATGACTGGGATAAAGAAAAGGA
GGTGGATAATACTGTGAAAGGAGATATCGCATCTGCTTCAAATTTTGTCA
CGGAAGCAAGCATCGTTGAAGAGGAGAAGGAAAAGGCCATCCTTTCACTG
GCCGAATGTCGGACGAACTATGGGGAGCGACGATTTCTACACGAGGATGA
GAAGGCTCTGCCACCTATTCTCTACAGCTTTCCAGGGAGTGGAAACACTT
GGACTCGTCTTCTCATTGATTTCAGCACTGGGATTTATACTGGTACGATC
TTCGCCAAGCCGAAAAATAAGCCCGAAAAAACTAAGCTGCCAGGACAAGG
CTACTGTAATCATATGGTCAGCGCCATCAAGGCCCATCCTAATCAGATCA
GTCCCGAAGAACTTTTCACTGTGCCTCCTTCGGATCCACGCATAGACGAA
TACAGAGATATGGTACTCTCATTCAGAAAGATTCGAAGGAAATTTCCAAA
GGGCATCTTTCGCATTCAATATGAGGAAATGCTGGACCCAGATATGCGCC
TGAGCATCTTGTCGAGATTGGTGAAGTTCATAGGTAAGTAA back to topprotein sequence of jgi.p|Nanoce1779_2|569255 >mRNA_9765-protein ID=mRNA_9765-protein|Name=jgi.p|Nanoce1779_2|569255|organism=Nannochloropsis oceanica|type=polypeptide|length=397bp
MGVRPARKPNKLGKMPIRIAIGTAAFCAGLALLHRLWLPPTLKQGGLQAS
STVVVTTNDGLPSPSSSIQMDSPGTFSSSSSSGVVQEEMVDSLGDHSGDV
VIKTLSSDLLIDQRGQKHVKDEELHKKDEQDKEIDEAEKEKDGSQKEDKE
DEDELRRFEEENNKRLMNGVWKEGEEEDDDDYDDDFLSGEWEDAKEEDDD
EKDEEEEDTDDWDKEKEVDNTVKGDIASASNFVTEASIVEEEKEKAILSL
AECRTNYGERRFLHEDEKALPPILYSFPGSGNTWTRLLIDFSTGIYTGTI
FAKPKNKPEKTKLPGQGYCNHMVSAIKAHPNQISPEELFTVPPSDPRIDE
YRDMVLSFRKIRRKFPKGIFRIQYEEMLDPDMRLSILSRLVKFIGK* back to topmRNA from alignment at scaffold_37:155084..156993- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9765 ID=mRNA_9765|Name=jgi.p|Nanoce1779_2|569255|organism=Nannochloropsis oceanica|type=mRNA|length=1910bp|location=Sequence derived from alignment at scaffold_37:155084..156993- (Nannochloropsis oceanica)
ATGGGCGTTAGACCCGCTCGCAAGCCCAACAAACTGGGCAAAATGCCCAT
TCGCATTGCTATAGGGACGGCCGCCTTTTGTGCTGGCCTCGCATTGTTGC
ACAGGCTCTGGTTGCCACCCACTCTAAAGCAAGGGGGCCTTCAAGCTTCT
AGCACTGTCGTTGTCACAACTAATGATGGTTTGCCTTCTCCTTCGTCTTC
AATCCAGATGGATTCCCCAGGCACCTTCTCATCCTCGTCTTCTTCGGGTG
TAGTACAGGAAGAAATGGTCGACAGCCTTGGGGACCATAGTGGTGACGTC
GTGATCAAGACGTTATCATCAGATTTATTGATTGATCAGAGGGGTCAAAA
GCACGTGAAGGACGAGGAGTTGCATAAGAAAGACGAGCAGGACAAAGAGA
TTGATGAGGCAGAGAAAGAGAAAGATGGAAGCCAGAAAGAAGACAAAGAG
GACGAAGACGAGCTGCGACGATTCGAAGAAGAAAATAACAAGAGACTGAT
GAATGGAGTCTGGAAAGAAGGTGAAGAGGAAGATGATGATGATTATGATG
ATGACTTCTTATCCGGAGAATGGGAAGACGCTAAGGAGGAAGACGATGAC
GAGAAGGACGAAGAGGAGGAGGACACTGATGACTGGGATAAAGAAAAGGA
GGTGGATAATACTGTGAAAGGAGATATCGCATCTGCTTCAAATTTTGTCA
CGGAAGCAAGCATCGTTGAAGAGGAGAAGGAAAAGGCCATCCTTTCACTG
GCCGAATGTCGGACGAACTATGGGGAGCGACGATTTCTACACGAGGATGA
GAAGGCTCTGCCACCTATTCTCTACAGCTTTCCAGGTGAGTGAGTGTCCA
GACCTATTCGGCAGTTTTCTCGTTCATTCATCGTTTTTGCATCCATATCG
ACAGGGAGTGGAAACACTTGGACTCGTCTTCTCATTGATTTCAGCACTGG
GATTTATACTGGTACGATCTTCGCCAAGCCGAAAAATAAGCCCGAAAAAA
CTAAGCTGCCAGGACAAGGCTACTGTAATCATATGGTAATTAAAAGGAGT
ACATGCAGTTACTTACCATTTCATTTATTCCTTGTAGGTCTTTTCCCTAA
ATTTGTATGATTTAAACTAATCTACCTTTGATGTGTCTTTTTGTCAATGC
AGGTCAGCGCCATCAAGGCCCATCCTAATCAGATCAGTCCCGAAGAACTT
TTCACTGTGCCTCCTTCGGATCCACGCATAGGTAAGTGAGCGGGGCCTAC
AACAATTATGAGGCAAAATGAAGACTTGGGGGCGAAAGCAGCGGTAACGG
TGGAGAATGAGGGTATCACCAGAGTCCGTTAAAAAATTTGCTGCACCGGT
TTGGGGACCACATAAACTTGTGTTAGCTTCAAGACGGAATCATCGAGAAG
TACAAGACCCGTCAATTGTTTTCCCCTGACATTTCATGGACGCTAACGAT
TGCAAAATTGCTCATCTAATTTAATAGGTCGGTGTGTAACAGTCTAGGCA
ACATTACGTCATTTGATCGATTCATTTTGCTGACTCGCAATCCATTCGAC
GCTATTTGGAGCGAGTACCGAAGAACTGCTAACGACGTACACTATATTCT
TCGTGACGATTTCGATTCGAGTCAATTTGCCCATACTGTAGTCTCAAAAT
CGTCAAGTAAGTAAAAGATTGCACGCCTGACCCTGCCCATGTGCCCCTTT
GCATGCTTGGTAGAATACAACTAGTACTTCTCCATTAAATGCATACATAC
TACCACTTATCCAGACGAATACAGAGATATGGTACTCTCATTCAGAAAGA
TTCGAAGGAAATTTCCAAAGGGCATCTTTCGCATTCAATATGAGGAAATG
CTGGACCCAGATATGCGCCTGAGCATCTTGTCGAGATTGGTGAAGTTCAT
AGGTAAGTAA back to topCoding sequence (CDS) from alignment at scaffold_37:155084..156993- >mRNA_9765 ID=mRNA_9765|Name=jgi.p|Nanoce1779_2|569255|organism=Nannochloropsis oceanica|type=CDS|length=4764bp|location=Sequence derived from alignment at scaffold_37:155084..156993- (Nannochloropsis oceanica)
ACGAATACAGAGATATGGTACTCTCATTCAGAAAGATTCGAAGGAAATTT
CCAAAGGGCATCTTTCGCATTCAATATGAGGAAATGCTGGACCCAGATAT
GCGCCTGAGCATCTTGTCGAGATTGGTGAAGTTCATAGGTAAGTAAGTCA
GCGCCATCAAGGCCCATCCTAATCAGATCAGTCCCGAAGAACTTTTCACT
GTGCCTCCTTCGGATCCACGCATAGGGAGTGGAAACACTTGGACTCGTCT
TCTCATTGATTTCAGCACTGGGATTTATACTGGTACGATCTTCGCCAAGC
CGAAAAATAAGCCCGAAAAAACTAAGCTGCCAGGACAAGGCTACTGTAAT
CATATGATGGGCGTTAGACCCGCTCGCAAGCCCAACAAACTGGGCAAAAT
GCCCATTCGCATTGCTATAGGGACGGCCGCCTTTTGTGCTGGCCTCGCAT
TGTTGCACAGGCTCTGGTTGCCACCCACTCTAAAGCAAGGGGGCCTTCAA
GCTTCTAGCACTGTCGTTGTCACAACTAATGATGGTTTGCCTTCTCCTTC
GTCTTCAATCCAGATGGATTCCCCAGGCACCTTCTCATCCTCGTCTTCTT
CGGGTGTAGTACAGGAAGAAATGGTCGACAGCCTTGGGGACCATAGTGGT
GACGTCGTGATCAAGACGTTATCATCAGATTTATTGATTGATCAGAGGGG
TCAAAAGCACGTGAAGGACGAGGAGTTGCATAAGAAAGACGAGCAGGACA
AAGAGATTGATGAGGCAGAGAAAGAGAAAGATGGAAGCCAGAAAGAAGAC
AAAGAGGACGAAGACGAGCTGCGACGATTCGAAGAAGAAAATAACAAGAG
ACTGATGAATGGAGTCTGGAAAGAAGGTGAAGAGGAAGATGATGATGATT
ATGATGATGACTTCTTATCCGGAGAATGGGAAGACGCTAAGGAGGAAGAC
GATGACGAGAAGGACGAAGAGGAGGAGGACACTGATGACTGGGATAAAGA
AAAGGAGGTGGATAATACTGTGAAAGGAGATATCGCATCTGCTTCAAATT
TTGTCACGGAAGCAAGCATCGTTGAAGAGGAGAAGGAAAAGGCCATCCTT
TCACTGGCCGAATGTCGGACGAACTATGGGGAGCGACGATTTCTACACGA
GGATGAGAAGGCTCTGCCACCTATTCTCTACAGCTTTCCAGACGAATACA
GAGATATGGTACTCTCATTCAGAAAGATTCGAAGGAAATTTCCAAAGGGC
ATCTTTCGCATTCAATATGAGGAAATGCTGGACCCAGATATGCGCCTGAG
CATCTTGTCGAGATTGGTGAAGTTCATAGGTAAGTAAGTCAGCGCCATCA
AGGCCCATCCTAATCAGATCAGTCCCGAAGAACTTTTCACTGTGCCTCCT
TCGGATCCACGCATAGGGAGTGGAAACACTTGGACTCGTCTTCTCATTGA
TTTCAGCACTGGGATTTATACTGGTACGATCTTCGCCAAGCCGAAAAATA
AGCCCGAAAAAACTAAGCTGCCAGGACAAGGCTACTGTAATCATATGATG
GGCGTTAGACCCGCTCGCAAGCCCAACAAACTGGGCAAAATGCCCATTCG
CATTGCTATAGGGACGGCCGCCTTTTGTGCTGGCCTCGCATTGTTGCACA
GGCTCTGGTTGCCACCCACTCTAAAGCAAGGGGGCCTTCAAGCTTCTAGC
ACTGTCGTTGTCACAACTAATGATGGTTTGCCTTCTCCTTCGTCTTCAAT
CCAGATGGATTCCCCAGGCACCTTCTCATCCTCGTCTTCTTCGGGTGTAG
TACAGGAAGAAATGGTCGACAGCCTTGGGGACCATAGTGGTGACGTCGTG
ATCAAGACGTTATCATCAGATTTATTGATTGATCAGAGGGGTCAAAAGCA
CGTGAAGGACGAGGAGTTGCATAAGAAAGACGAGCAGGACAAAGAGATTG
ATGAGGCAGAGAAAGAGAAAGATGGAAGCCAGAAAGAAGACAAAGAGGAC
GAAGACGAGCTGCGACGATTCGAAGAAGAAAATAACAAGAGACTGATGAA
TGGAGTCTGGAAAGAAGGTGAAGAGGAAGATGATGATGATTATGATGATG
ACTTCTTATCCGGAGAATGGGAAGACGCTAAGGAGGAAGACGATGACGAG
AAGGACGAAGAGGAGGAGGACACTGATGACTGGGATAAAGAAAAGGAGGT
GGATAATACTGTGAAAGGAGATATCGCATCTGCTTCAAATTTTGTCACGG
AAGCAAGCATCGTTGAAGAGGAGAAGGAAAAGGCCATCCTTTCACTGGCC
GAATGTCGGACGAACTATGGGGAGCGACGATTTCTACACGAGGATGAGAA
GGCTCTGCCACCTATTCTCTACAGCTTTCCAGACGAATACAGAGATATGG
TACTCTCATTCAGAAAGATTCGAAGGAAATTTCCAAAGGGCATCTTTCGC
ATTCAATATGAGGAAATGCTGGACCCAGATATGCGCCTGAGCATCTTGTC
GAGATTGGTGAAGTTCATAGGTAAGTAAGTCAGCGCCATCAAGGCCCATC
CTAATCAGATCAGTCCCGAAGAACTTTTCACTGTGCCTCCTTCGGATCCA
CGCATAGGGAGTGGAAACACTTGGACTCGTCTTCTCATTGATTTCAGCAC
TGGGATTTATACTGGTACGATCTTCGCCAAGCCGAAAAATAAGCCCGAAA
AAACTAAGCTGCCAGGACAAGGCTACTGTAATCATATGATGGGCGTTAGA
CCCGCTCGCAAGCCCAACAAACTGGGCAAAATGCCCATTCGCATTGCTAT
AGGGACGGCCGCCTTTTGTGCTGGCCTCGCATTGTTGCACAGGCTCTGGT
TGCCACCCACTCTAAAGCAAGGGGGCCTTCAAGCTTCTAGCACTGTCGTT
GTCACAACTAATGATGGTTTGCCTTCTCCTTCGTCTTCAATCCAGATGGA
TTCCCCAGGCACCTTCTCATCCTCGTCTTCTTCGGGTGTAGTACAGGAAG
AAATGGTCGACAGCCTTGGGGACCATAGTGGTGACGTCGTGATCAAGACG
TTATCATCAGATTTATTGATTGATCAGAGGGGTCAAAAGCACGTGAAGGA
CGAGGAGTTGCATAAGAAAGACGAGCAGGACAAAGAGATTGATGAGGCAG
AGAAAGAGAAAGATGGAAGCCAGAAAGAAGACAAAGAGGACGAAGACGAG
CTGCGACGATTCGAAGAAGAAAATAACAAGAGACTGATGAATGGAGTCTG
GAAAGAAGGTGAAGAGGAAGATGATGATGATTATGATGATGACTTCTTAT
CCGGAGAATGGGAAGACGCTAAGGAGGAAGACGATGACGAGAAGGACGAA
GAGGAGGAGGACACTGATGACTGGGATAAAGAAAAGGAGGTGGATAATAC
TGTGAAAGGAGATATCGCATCTGCTTCAAATTTTGTCACGGAAGCAAGCA
TCGTTGAAGAGGAGAAGGAAAAGGCCATCCTTTCACTGGCCGAATGTCGG
ACGAACTATGGGGAGCGACGATTTCTACACGAGGATGAGAAGGCTCTGCC
ACCTATTCTCTACAGCTTTCCAGACGAATACAGAGATATGGTACTCTCAT
TCAGAAAGATTCGAAGGAAATTTCCAAAGGGCATCTTTCGCATTCAATAT
GAGGAAATGCTGGACCCAGATATGCGCCTGAGCATCTTGTCGAGATTGGT
GAAGTTCATAGGTAAGTAAGTCAGCGCCATCAAGGCCCATCCTAATCAGA
TCAGTCCCGAAGAACTTTTCACTGTGCCTCCTTCGGATCCACGCATAGGG
AGTGGAAACACTTGGACTCGTCTTCTCATTGATTTCAGCACTGGGATTTA
TACTGGTACGATCTTCGCCAAGCCGAAAAATAAGCCCGAAAAAACTAAGC
TGCCAGGACAAGGCTACTGTAATCATATGATGGGCGTTAGACCCGCTCGC
AAGCCCAACAAACTGGGCAAAATGCCCATTCGCATTGCTATAGGGACGGC
CGCCTTTTGTGCTGGCCTCGCATTGTTGCACAGGCTCTGGTTGCCACCCA
CTCTAAAGCAAGGGGGCCTTCAAGCTTCTAGCACTGTCGTTGTCACAACT
AATGATGGTTTGCCTTCTCCTTCGTCTTCAATCCAGATGGATTCCCCAGG
CACCTTCTCATCCTCGTCTTCTTCGGGTGTAGTACAGGAAGAAATGGTCG
ACAGCCTTGGGGACCATAGTGGTGACGTCGTGATCAAGACGTTATCATCA
GATTTATTGATTGATCAGAGGGGTCAAAAGCACGTGAAGGACGAGGAGTT
GCATAAGAAAGACGAGCAGGACAAAGAGATTGATGAGGCAGAGAAAGAGA
AAGATGGAAGCCAGAAAGAAGACAAAGAGGACGAAGACGAGCTGCGACGA
TTCGAAGAAGAAAATAACAAGAGACTGATGAATGGAGTCTGGAAAGAAGG
TGAAGAGGAAGATGATGATGATTATGATGATGACTTCTTATCCGGAGAAT
GGGAAGACGCTAAGGAGGAAGACGATGACGAGAAGGACGAAGAGGAGGAG
GACACTGATGACTGGGATAAAGAAAAGGAGGTGGATAATACTGTGAAAGG
AGATATCGCATCTGCTTCAAATTTTGTCACGGAAGCAAGCATCGTTGAAG
AGGAGAAGGAAAAGGCCATCCTTTCACTGGCCGAATGTCGGACGAACTAT
GGGGAGCGACGATTTCTACACGAGGATGAGAAGGCTCTGCCACCTATTCT
CTACAGCTTTCCAG back to top
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