jgi.p|Nanoce1779_2|607069, mRNA_9758 (mRNA) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|607069
Unique NamemRNA_9758
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length743
Alignment locationscaffold_37:133712..135049 -

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Properties
Property NameValue
TranscriptId607155
TrackFilteredModels2
ProteinId607069
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_37supercontigscaffold_37:133712..135049 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|607069gene_9758Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|607069mRNA_9758-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS_9758CDS_9758Nannochloropsis oceanica (N. oceanica CCMP1779)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>mRNA_9758 ID=mRNA_9758|Name=jgi.p|Nanoce1779_2|607069|organism=Nannochloropsis oceanica|type=mRNA|length=743bp
ACAGCTGCAACAGCAACTCCACCTGTCCTCCCTGCCTGCTGCTCCTTCGG
ATCCTCCGGACGCCTTCAAGCCATGCGATCACAACCCTTCCTTCTCCCCC
AGCTCTTCCTCTCACTCCTGCTGTTGCCCATCCTCGCCGTACATGCCTTT
TTGCCACCCCCTGTCCTCCCCTCCCCCGCCTCGTACTCCACCATCAAAGC
CCTATCCCCCGGCAAGCCCAACCTAGGAAAAGGCGGGGCCGTCCTTCAAA
AACCTCAGCTCCAAACCGCCACACGCGTGGGTCCTCCCAAGAACAAAGAG
AAGACTGAACAGAAATTCGAGACGAAGGAGGAGGAGAGTGAGAAGTTTGC
TGTGGTGCTGGTGGGGGACAAGGAGTACGACCAGGGACATGTGGTGAAGG
TGCTGTGCAAGGTAATCGCGGGCCTCGGTGCCATGAAGGCCGTGGCTGCC
TTCCAAGAGGCACAGAGCAAGGGGAAGGCGATCGTGCTGATTTGTGACGA
GGAGAGCGCGGAGACCGTCGCTGAATTAATCTGTCGGAACAAGCCGCCGG
TGATTGCGGATGTGGAGCCCTTGAGAAAAGGCGATTAGTTGGATGCTTGA
TGGGGTCGTTGTCGTGTCCGTGGGAAGAGGAGGCGATTGATTGATTGAAA
CCTTGATGTTGGAGTATCTGCTCCTTTAAGGTAGGCGGTGGTTGGTCGAA
AGGAGAAAGATTGGAAAGGAAGAGGGAGAAGGAGAGATGAGGA
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protein sequence of jgi.p|Nanoce1779_2|607069

>mRNA_9758-protein ID=mRNA_9758-protein|Name=jgi.p|Nanoce1779_2|607069|organism=Nannochloropsis oceanica|type=polypeptide|length=172bp
MRSQPFLLPQLFLSLLLLPILAVHAFLPPPVLPSPASYSTIKALSPGKPN
LGKGGAVLQKPQLQTATRVGPPKNKEKTEQKFETKEEESEKFAVVLVGDK
EYDQGHVVKVLCKVIAGLGAMKAVAAFQEAQSKGKAIVLICDEESAETVA
ELICRNKPPVIADVEPLRKGD*
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mRNA from alignment at scaffold_37:133712..135049-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9758 ID=mRNA_9758|Name=jgi.p|Nanoce1779_2|607069|organism=Nannochloropsis oceanica|type=mRNA|length=1338bp|location=Sequence derived from alignment at scaffold_37:133712..135049- (Nannochloropsis oceanica)
ACAGCTGCAACAGCAACTCCACCTGTCCTCCCTGCCTGCTGCTCCTTCGG
ATCCTCCGGACGCCTTCAAGCCATGCGATCACAACCCTTCCTTCTCCCCC
AGCTCTTCCTCTCACTCCTGCTGTTGCCCATCCTCGCCGTACATGCCTTT
TTGCCACCCCCTGTCCTCCCCTCCCCCGCCTCGTACTCCACCATCAAAGC
CCTATCCCCCGGCAAGCCCAACCTAGGTACGCGGATGGTGAACGAGAGAG
AGAGAGAGCTCGTGAGCAGATCCATTCCTTGTCTCTCATTCTCTCTATCT
ACCACTCAGGCGTGCTTGGGACTCATTTGATCTAGTGCATCCATCTCATC
TCCCATTCCCTGCTGCCCTTGCCCTCCCTCCCCCACTCTCCCTCTCCTTC
CCTTCCTTCCTTCCTCTTTCCCCCACCAGGAAAAGGCGGGGCCGTCCTTC
AAAAACCTCAGCTCCAAACCGCCACACGCGTGGGTCCTCCCAAGAACAAA
GAGAAGACTGAACAGAAATTCGAGACGAAGGAGGAGGAGAGTGAGAAGTT
TGCTGTGGTGCTGGTGGGGGACAAGGAGTACGACCAGGGACATGTGGTGA
AGGTAGGGAGGGAGGAAGGCGCAGAGGAAGGGAGGGAGGGCAAGTTGTGC
TATTATATAAAGAATACCGCGTCACAATATATGGAGAAGGGGGTAGGAAG
GGAGGGTTGAATCGCGGGAAGGAAGAGGGATGAGCACGAGTCAAGAGGGA
CATCGTTTAAAAGAGCTTTGACGGCAAACGCCGAAGTTCTTTCTTGACAT
GTACAAGCGTCAAGGACTTGATCTGTTAATTTATCCCTCCATCTCTTTCT
CCCTCCCTCTGTAGCTCCTCCCACCTTCCCGTCCTCCCTCTTTTCCACCC
CCCTTTCGCCTTGTCCCCGAGGGTGGTTCCCACAGGATCAAAAGAAGGAG
CGTCCTCACCACTCCCTCCCTCCCTCCCTCCTCCTCTCCCTCAGGTGCTG
TGCAAGGTAATCGCGGGCCTCGGTGCCATGAAGGCCGTGGCTGCCTTCCA
AGAGGCACAGAGCAAGGGGAAGGCGATCGTGCTGATTTGTGACGAGGAGA
GCGCGGAGACCGTCGCTGAATTAATCTGTCGGAACAAGCCGCCGGTGATT
GCGGATGTGGAGCCCTTGAGAAAAGGCGATTAGTTGGATGCTTGATGGGG
TCGTTGTCGTGTCCGTGGGAAGAGGAGGCGATTGATTGATTGAAACCTTG
ATGTTGGAGTATCTGCTCCTTTAAGGTAGGCGGTGGTTGGTCGAAAGGAG
AAAGATTGGAAAGGAAGAGGGAGAAGGAGAGATGAGGA
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Coding sequence (CDS) from alignment at scaffold_37:133712..135049-

>mRNA_9758 ID=mRNA_9758|Name=jgi.p|Nanoce1779_2|607069|organism=Nannochloropsis oceanica|type=CDS|length=1548bp|location=Sequence derived from alignment at scaffold_37:133712..135049- (Nannochloropsis oceanica)
GTGCTGTGCAAGGTAATCGCGGGCCTCGGTGCCATGAAGGCCGTGGCTGC
CTTCCAAGAGGCACAGAGCAAGGGGAAGGCGATCGTGCTGATTTGTGACG
AGGAGAGCGCGGAGACCGTCGCTGAATTAATCTGTCGGAACAAGCCGCCG
GTGATTGCGGATGTGGAGCCCTTGAGAAAAGGCGATTAGGAAAAGGCGGG
GCCGTCCTTCAAAAACCTCAGCTCCAAACCGCCACACGCGTGGGTCCTCC
CAAGAACAAAGAGAAGACTGAACAGAAATTCGAGACGAAGGAGGAGGAGA
GTGAGAAGTTTGCTGTGGTGCTGGTGGGGGACAAGGAGTACGACCAGGGA
CATGTGGTGAAGATGCGATCACAACCCTTCCTTCTCCCCCAGCTCTTCCT
CTCACTCCTGCTGTTGCCCATCCTCGCCGTACATGCCTTTTTGCCACCCC
CTGTCCTCCCCTCCCCCGCCTCGTACTCCACCATCAAAGCCCTATCCCCC
GGCAAGCCCAACCTAGGTGCTGTGCAAGGTAATCGCGGGCCTCGGTGCCA
TGAAGGCCGTGGCTGCCTTCCAAGAGGCACAGAGCAAGGGGAAGGCGATC
GTGCTGATTTGTGACGAGGAGAGCGCGGAGACCGTCGCTGAATTAATCTG
TCGGAACAAGCCGCCGGTGATTGCGGATGTGGAGCCCTTGAGAAAAGGCG
ATTAGGAAAAGGCGGGGCCGTCCTTCAAAAACCTCAGCTCCAAACCGCCA
CACGCGTGGGTCCTCCCAAGAACAAAGAGAAGACTGAACAGAAATTCGAG
ACGAAGGAGGAGGAGAGTGAGAAGTTTGCTGTGGTGCTGGTGGGGGACAA
GGAGTACGACCAGGGACATGTGGTGAAGATGCGATCACAACCCTTCCTTC
TCCCCCAGCTCTTCCTCTCACTCCTGCTGTTGCCCATCCTCGCCGTACAT
GCCTTTTTGCCACCCCCTGTCCTCCCCTCCCCCGCCTCGTACTCCACCAT
CAAAGCCCTATCCCCCGGCAAGCCCAACCTAGGTGCTGTGCAAGGTAATC
GCGGGCCTCGGTGCCATGAAGGCCGTGGCTGCCTTCCAAGAGGCACAGAG
CAAGGGGAAGGCGATCGTGCTGATTTGTGACGAGGAGAGCGCGGAGACCG
TCGCTGAATTAATCTGTCGGAACAAGCCGCCGGTGATTGCGGATGTGGAG
CCCTTGAGAAAAGGCGATTAGGAAAAGGCGGGGCCGTCCTTCAAAAACCT
CAGCTCCAAACCGCCACACGCGTGGGTCCTCCCAAGAACAAAGAGAAGAC
TGAACAGAAATTCGAGACGAAGGAGGAGGAGAGTGAGAAGTTTGCTGTGG
TGCTGGTGGGGGACAAGGAGTACGACCAGGGACATGTGGTGAAGATGCGA
TCACAACCCTTCCTTCTCCCCCAGCTCTTCCTCTCACTCCTGCTGTTGCC
CATCCTCGCCGTACATGCCTTTTTGCCACCCCCTGTCCTCCCCTCCCCCG
CCTCGTACTCCACCATCAAAGCCCTATCCCCCGGCAAGCCCAACCTAG
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Synonyms
Publications