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Properties
| Property Name | Value |
|---|
| TranscriptId | 607126 |
| Track | FilteredModels2 |
| ProteinId | 607040 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_37 | supercontig | scaffold_37:111807..113126 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9752 ID=mRNA_9752|Name=jgi.p|Nanoce1779_2|607040|organism=Nannochloropsis oceanica|type=mRNA|length=584bp
AGGTGGAAGCTAGCGAGGCCGTGTCATTATTGCCACTTGCCTTACCCTCG
GCGACGGGCGCCCTTTGCGCACATGCGGATCGTCCCTTGTCAGGTGTGTG
GGCGGAAATGGGTGCCGGAGGGATTGCTTGCCACCATCGAGCCGCCGGTC
CGTTTGCTGACGCGGGGGGAGGGGGTCTTGATTGAGGCCCGCGTCTGTCG
CCCCCGAGCCCGAGGCACGGGCGAGTTGGACGCCCTCCAAGTCTCTCACG
CCCTGCCTTTCCTCGAGTATGATCTCCACCGACAGCTGATGCTCAAGATG
AGGGTCTTGGGCGTCAATGCCTGCTTCGCCATTCGCAGCCAGCTACAGGT
CATTTGGGGCTGGACCTCCTCCCTTCCCTTCCCTCCCCTCCCTCCTTTCC
TTCACCTGTTCATTTCCACCACCTTTCCTTCCCTCCCGCTCTCAGGTCGG
TGCATCCATCATTCTTGGAACCCTCAGTGGGACTGGCACTTATGTTTCGG
CCTTACCCCCACTAGCGCCGCTGGCCATTCGCCGCACATTTGCCGTGAAA
GATGAGGAAGACAGGGCACTGGTGGACATGCAGA back to topprotein sequence of jgi.p|Nanoce1779_2|607040 >mRNA_9752-protein ID=mRNA_9752-protein|Name=jgi.p|Nanoce1779_2|607040|organism=Nannochloropsis oceanica|type=polypeptide|length=161bp
MRIVPCQVCGRKWVPEGLLATIEPPVRLLTRGEGVLIEARVCRPRARGTG
ELDALQVSHALPFLEYDLHRQLMLKMRVLGVNACFAIRSQLQVIWGWTSS
LPFPPLPPFLHLFISTTFPSLPLSGRCIHHSWNPQWDWHLCFGLTPTSAA
GHSPHICRER* back to topmRNA from alignment at scaffold_37:111807..113126+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9752 ID=mRNA_9752|Name=jgi.p|Nanoce1779_2|607040|organism=Nannochloropsis oceanica|type=mRNA|length=1320bp|location=Sequence derived from alignment at scaffold_37:111807..113126+ (Nannochloropsis oceanica)
AGGTGGAAGCTAGCGAGGCCGTGTCATTATTGCCACTTGCCTTACCCTCG
GCGACGGGCGCCCTTTGCGCACATGCGGATCGTCCCTTGTCAGGTAGGGG
GGGAGGGAGGGGCAGAGGGAGGCAGGTTGGATGGGGGGGGGGGGAAGGAA
GGAAAAGAAAGGGTAACAGAAGGTAAAATGAGGGAGGGAAGGAGGGCGGG
AGAGAGGATGGAGACAGGCGGAAGGCTGAAGGCCAAGCAAGATACCCCTT
CATACGCCCGTGTGTTGCATGACAGTCTAAAACAATATGTTGGCGCCCGA
TACAATGTGCTGGAAACATACAGGTGTGTGGGCGGAAATGGGTGCCGGAG
GGATTGCTTGCCACCATCGAGCCGCCGGTCCGTTTGCTGACGCGGGGGGA
GGGGGTCTTGATTGAGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAACC
ATGCACGGTGGAAATAAAGAGGCATTTCTGTGGAGAGGGGTGCTTGACGT
CTCTTCCCTCCCTCCCCCCCACCCTCTCTTCCTTAGGCCCGCGTCTGTCG
CCCCCGAGCCCGAGGCACGGGCGAGTTGGACGCCCTCCAAGTCTCTCACG
CCCTGCCTTTCCTCGAGTATGATCTCCACCGACAGCTGATGCTCAAGATG
AGGGTCTTGGGCGTCAATGCCTGCTTCGCCATTCGCAGCCAGCTACAGGT
CATTTGGGGCTGGACCTCCTCCCTTCCCTTCCCTCCCCTCCCTCCTTTCC
TTCACCTGTTCATTTCCACCACCTTTCCTTCCCTCCCGCTCTCAGGTCGG
TGCATCCATCATTCTTGGAACCCTCAGTGGGACTGGCACTTATGTTTCGG
CCTTACCCCCACTAGGTGAGAGAGGAGGGAAGGAGGGAAGGAGGGAGGGA
GGGGGGGACGGACCAAAAGCTCACTTTTTTGTTGTGTTTTTACTCACAAC
TTTTTCGCACACACCCAGCGCCGCTGGCCATTCGCCGCACATTTGCCGTG
AAAGATGAGGAAGACAGGTAAATGAGGAGGTCGACGGTGAGGGACGAAAA
GAGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGAGAGGAAAGGGAGAA
GGGAAGGGTAGTTTTCTTCCATCTTTCTTATCCCACTTGTTGAGGCATGG
TCCTGGGGAAAGCTTAAATCAGATGAAATGAATGTCTTTCCATACGGGGA
AAAAGGTGGTAAGGGTGTAGAGGGAGGGAGGGTAGGAGGTTCTACTTTCT
CACCTGTTTCTAAATTTGATCTCCCTTATCCCCTCCAAACCCATCACCAG
GGCACTGGTGGACATGCAGA back to topCoding sequence (CDS) from alignment at scaffold_37:111807..113126+ >mRNA_9752 ID=mRNA_9752|Name=jgi.p|Nanoce1779_2|607040|organism=Nannochloropsis oceanica|type=CDS|length=1932bp|location=Sequence derived from alignment at scaffold_37:111807..113126+ (Nannochloropsis oceanica)
ATGCGGATCGTCCCTTGTCAGGTGTGTGGGCGGAAATGGGTGCCGGAGGG
ATTGCTTGCCACCATCGAGCCGCCGGTCCGTTTGCTGACGCGGGGGGAGG
GGGTCTTGATTGAGGCCCGCGTCTGTCGCCCCCGAGCCCGAGGCACGGGC
GAGTTGGACGCCCTCCAAGTCTCTCACGCCCTGCCTTTCCTCGAGTATGA
TCTCCACCGACAGCTGATGCTCAAGATGAGGGTCTTGGGCGTCAATGCCT
GCTTCGCCATTCGCAGCCAGCTACAGGTCATTTGGGGCTGGACCTCCTCC
CTTCCCTTCCCTCCCCTCCCTCCTTTCCTTCACCTGTTCATTTCCACCAC
CTTTCCTTCCCTCCCGCTCTCAGGTCGGTGCATCCATCATTCTTGGAACC
CTCAGTGGGACTGGCACTTATGTTTCGGCCTTACCCCCACTAGCGCCGCT
GGCCATTCGCCGCACATTTGCCGTGAAAGATGAATGCGGATCGTCCCTTG
TCAGGTGTGTGGGCGGAAATGGGTGCCGGAGGGATTGCTTGCCACCATCG
AGCCGCCGGTCCGTTTGCTGACGCGGGGGGAGGGGGTCTTGATTGAGGCC
CGCGTCTGTCGCCCCCGAGCCCGAGGCACGGGCGAGTTGGACGCCCTCCA
AGTCTCTCACGCCCTGCCTTTCCTCGAGTATGATCTCCACCGACAGCTGA
TGCTCAAGATGAGGGTCTTGGGCGTCAATGCCTGCTTCGCCATTCGCAGC
CAGCTACAGGTCATTTGGGGCTGGACCTCCTCCCTTCCCTTCCCTCCCCT
CCCTCCTTTCCTTCACCTGTTCATTTCCACCACCTTTCCTTCCCTCCCGC
TCTCAGGTCGGTGCATCCATCATTCTTGGAACCCTCAGTGGGACTGGCAC
TTATGTTTCGGCCTTACCCCCACTAGCGCCGCTGGCCATTCGCCGCACAT
TTGCCGTGAAAGATGAATGCGGATCGTCCCTTGTCAGGTGTGTGGGCGGA
AATGGGTGCCGGAGGGATTGCTTGCCACCATCGAGCCGCCGGTCCGTTTG
CTGACGCGGGGGGAGGGGGTCTTGATTGAGGCCCGCGTCTGTCGCCCCCG
AGCCCGAGGCACGGGCGAGTTGGACGCCCTCCAAGTCTCTCACGCCCTGC
CTTTCCTCGAGTATGATCTCCACCGACAGCTGATGCTCAAGATGAGGGTC
TTGGGCGTCAATGCCTGCTTCGCCATTCGCAGCCAGCTACAGGTCATTTG
GGGCTGGACCTCCTCCCTTCCCTTCCCTCCCCTCCCTCCTTTCCTTCACC
TGTTCATTTCCACCACCTTTCCTTCCCTCCCGCTCTCAGGTCGGTGCATC
CATCATTCTTGGAACCCTCAGTGGGACTGGCACTTATGTTTCGGCCTTAC
CCCCACTAGCGCCGCTGGCCATTCGCCGCACATTTGCCGTGAAAGATGAA
TGCGGATCGTCCCTTGTCAGGTGTGTGGGCGGAAATGGGTGCCGGAGGGA
TTGCTTGCCACCATCGAGCCGCCGGTCCGTTTGCTGACGCGGGGGGAGGG
GGTCTTGATTGAGGCCCGCGTCTGTCGCCCCCGAGCCCGAGGCACGGGCG
AGTTGGACGCCCTCCAAGTCTCTCACGCCCTGCCTTTCCTCGAGTATGAT
CTCCACCGACAGCTGATGCTCAAGATGAGGGTCTTGGGCGTCAATGCCTG
CTTCGCCATTCGCAGCCAGCTACAGGTCATTTGGGGCTGGACCTCCTCCC
TTCCCTTCCCTCCCCTCCCTCCTTTCCTTCACCTGTTCATTTCCACCACC
TTTCCTTCCCTCCCGCTCTCAGGTCGGTGCATCCATCATTCTTGGAACCC
TCAGTGGGACTGGCACTTATGTTTCGGCCTTACCCCCACTAGCGCCGCTG
GCCATTCGCCGCACATTTGCCGTGAAAGATGA back to top
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