|
|
Properties
| Property Name | Value |
|---|
| TranscriptId | 607086 |
| Track | FilteredModels2 |
| ProteinId | 607000 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_37 | supercontig | scaffold_37:82776..83958 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9742 ID=mRNA_9742|Name=jgi.p|Nanoce1779_2|607000|organism=Nannochloropsis oceanica|type=mRNA|length=698bp
ACAGCCAGTTTCATCAGAGTACAAACTTCTAAGCATTGCCAAAGCCAAGG
CATCATTGCTTCGGTTCTCCCACTGATCACGTCGTTATGGTCCCCCTCTC
CTCCTCCTCATCCTCCGCCTCCGCCTCTTCTCCTCCTCCTCGTCCCTTAA
CCGCCACCGTCGCTTCCACCCATGCACTTTCTCAGCCCATACCTGCACTG
CACGCACCACTGCTTCCCTCCTCATTTTCCTCCGACGAGCCGCCTCTGAC
TCTCTACGAAGACGGGTATTTGAAGCTCACCCCCACAAAGCTTAAAGTGA
AGTGCTATTTTTTCCCGTTCGGTTTAGCCAAGACCATCCCACTTAAGGAC
ATAAAAAAAGTCTCTCTCCTTCCCCTGGGCAGCATGTGGCAAGGCCAGTA
TAAGCACTGGGGTATGGCCGTTGATTTTCAACGTTGGTGGCCTAGCGATT
TGAGACGTGCGGGCAGGACGCACTTCATCGAGGTCGACTGTGGTTCATGG
CCGCGGGTGGCCTTCACGGTCAACGATCCAGAAAACGTCTACCTACTGCT
TTCGCAGGCAATGGCGGTGGCGAAGGCAGTAGTAAGAGGGGACCAGCAGC
AGCAGCATTAGCAGCAGCAAGAGGGTACCCGGTAGAAATGGTGATGATGA
TGATGATGATGATGACGAGGGGAAGGAGGGGGAGGAGGAGGAGGAGGA back to topprotein sequence of jgi.p|Nanoce1779_2|607000 >mRNA_9742-protein ID=mRNA_9742-protein|Name=jgi.p|Nanoce1779_2|607000|organism=Nannochloropsis oceanica|type=polypeptide|length=175bp
MVPLSSSSSSASASSPPPRPLTATVASTHALSQPIPALHAPLLPSSFSSD
EPPLTLYEDGYLKLTPTKLKVKCYFFPFGLAKTIPLKDIKKVSLLPLGSM
WQGQYKHWGMAVDFQRWWPSDLRRAGRTHFIEVDCGSWPRVAFTVNDPEN
VYLLLSQAMAVAKAVVRGDQQQQH* back to topmRNA from alignment at scaffold_37:82776..83958- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9742 ID=mRNA_9742|Name=jgi.p|Nanoce1779_2|607000|organism=Nannochloropsis oceanica|type=mRNA|length=1183bp|location=Sequence derived from alignment at scaffold_37:82776..83958- (Nannochloropsis oceanica)
ACAGCCAGTTTCATCAGAGTACAAACTTCTAAGCATTGCCAAAGCCAAGG
CATCATTGCTTCGGTTCTCCCACTGATCACGTCGTTATGGTCCCCCTCTC
CTCCTCCTCATCCTCCGCCTCCGCCTCTTCTCCTCCTCCTCGTCCCTTAA
CCGCCACCGTCGCTTCCACCCATGCACTTTCTCAGCCCATACCTGCACTG
CACGCACCACTGCTTCCCTCCTCATTTTCCTCCGACGAGCCGCCTCTGAC
TCTCTACGAAGACGGGTATTTGAAGCTCACCCCCACAAAGCTTAAAGTGA
AGTGCTATTTTTTCCCGTTCGGTTTAGCCAAGACCATCCCACTTAAGGAC
ATAAAAAAAGTAAGTGAAAAGTGGGAGGAGGGGGAGGATACGTGGAAAAT
GCGTTGGTGGCCAGGGATGGAGTTGGCAAAAGATGCTCTGAACCTGTACT
CATCCACCCACTCATCCCTTCCCTTTTTCCCTCCCTCCCAACCCCTCAGG
TCTCTCTCCTTCCCCTGGGCAGCATGTGGCAAGGCCAGTATAAGCACTGG
GGTATGGCCGTTGATTTTCAACGTTGGTGGCCTAGCGATTTGAGACGTGC
GGGCAGGGTAAGGAGGGAGGGAAGGAGGGAAGGAGGGAAGGAGGGAAGGA
GGGGGGAAAGGACGGAAGGAGGGAACAAAAGAGAAAAGAAAGGAGAAAGA
TCCACGTGTCTGATGCCTCTTCTTTCCTCCCTCCTTCCCTCCTTCCCTTT
GTTCAGACGCACTTCATCGAGGTCGACTGTGGTTCATGGCCGCGGGTGGC
CTTCACGGTCAACGATCCAGAAAACGTCTACCTACTGCTTTCGCAGGTGA
GGAGGAGGGAGTGAGGGCGGGAGGGAGAGAGGTAGGGAGAGAGGCCCCTC
CGATGGACGAGCCTCCAAGGTGTTTGGGGCTCAGTGATCGAGTACGAGAA
TGAGGTTGACCAGTTGAGGGAGGGGGGAGGAAGGAATATTGTGAGAGAAG
AAGGAGGAGTTCATTCAAAGCATACGTACACTCTCACCCTAGGCAATGGC
GGTGGCGAAGGCAGTAGTAAGAGGGGACCAGCAGCAGCAGCATTAGCAGC
AGCAAGAGGGTACCCGGTAGAAATGGTGATGATGATGATGATGATGATGA
CGAGGGGAAGGAGGGGGAGGAGGAGGAGGAGGA back to topCoding sequence (CDS) from alignment at scaffold_37:82776..83958- >mRNA_9742 ID=mRNA_9742|Name=jgi.p|Nanoce1779_2|607000|organism=Nannochloropsis oceanica|type=CDS|length=2100bp|location=Sequence derived from alignment at scaffold_37:82776..83958- (Nannochloropsis oceanica)
GCAATGGCGGTGGCGAAGGCAGTAGTAAGAGGGGACCAGCAGCAGCAGCA
TTAGACGCACTTCATCGAGGTCGACTGTGGTTCATGGCCGCGGGTGGCCT
TCACGGTCAACGATCCAGAAAACGTCTACCTACTGCTTTCGCAGGTCTCT
CTCCTTCCCCTGGGCAGCATGTGGCAAGGCCAGTATAAGCACTGGGGTAT
GGCCGTTGATTTTCAACGTTGGTGGCCTAGCGATTTGAGACGTGCGGGCA
GGATGGTCCCCCTCTCCTCCTCCTCATCCTCCGCCTCCGCCTCTTCTCCT
CCTCCTCGTCCCTTAACCGCCACCGTCGCTTCCACCCATGCACTTTCTCA
GCCCATACCTGCACTGCACGCACCACTGCTTCCCTCCTCATTTTCCTCCG
ACGAGCCGCCTCTGACTCTCTACGAAGACGGGTATTTGAAGCTCACCCCC
ACAAAGCTTAAAGTGAAGTGCTATTTTTTCCCGTTCGGTTTAGCCAAGAC
CATCCCACTTAAGGACATAAAAAAAGCAATGGCGGTGGCGAAGGCAGTAG
TAAGAGGGGACCAGCAGCAGCAGCATTAGACGCACTTCATCGAGGTCGAC
TGTGGTTCATGGCCGCGGGTGGCCTTCACGGTCAACGATCCAGAAAACGT
CTACCTACTGCTTTCGCAGGTCTCTCTCCTTCCCCTGGGCAGCATGTGGC
AAGGCCAGTATAAGCACTGGGGTATGGCCGTTGATTTTCAACGTTGGTGG
CCTAGCGATTTGAGACGTGCGGGCAGGATGGTCCCCCTCTCCTCCTCCTC
ATCCTCCGCCTCCGCCTCTTCTCCTCCTCCTCGTCCCTTAACCGCCACCG
TCGCTTCCACCCATGCACTTTCTCAGCCCATACCTGCACTGCACGCACCA
CTGCTTCCCTCCTCATTTTCCTCCGACGAGCCGCCTCTGACTCTCTACGA
AGACGGGTATTTGAAGCTCACCCCCACAAAGCTTAAAGTGAAGTGCTATT
TTTTCCCGTTCGGTTTAGCCAAGACCATCCCACTTAAGGACATAAAAAAA
GCAATGGCGGTGGCGAAGGCAGTAGTAAGAGGGGACCAGCAGCAGCAGCA
TTAGACGCACTTCATCGAGGTCGACTGTGGTTCATGGCCGCGGGTGGCCT
TCACGGTCAACGATCCAGAAAACGTCTACCTACTGCTTTCGCAGGTCTCT
CTCCTTCCCCTGGGCAGCATGTGGCAAGGCCAGTATAAGCACTGGGGTAT
GGCCGTTGATTTTCAACGTTGGTGGCCTAGCGATTTGAGACGTGCGGGCA
GGATGGTCCCCCTCTCCTCCTCCTCATCCTCCGCCTCCGCCTCTTCTCCT
CCTCCTCGTCCCTTAACCGCCACCGTCGCTTCCACCCATGCACTTTCTCA
GCCCATACCTGCACTGCACGCACCACTGCTTCCCTCCTCATTTTCCTCCG
ACGAGCCGCCTCTGACTCTCTACGAAGACGGGTATTTGAAGCTCACCCCC
ACAAAGCTTAAAGTGAAGTGCTATTTTTTCCCGTTCGGTTTAGCCAAGAC
CATCCCACTTAAGGACATAAAAAAAGCAATGGCGGTGGCGAAGGCAGTAG
TAAGAGGGGACCAGCAGCAGCAGCATTAGACGCACTTCATCGAGGTCGAC
TGTGGTTCATGGCCGCGGGTGGCCTTCACGGTCAACGATCCAGAAAACGT
CTACCTACTGCTTTCGCAGGTCTCTCTCCTTCCCCTGGGCAGCATGTGGC
AAGGCCAGTATAAGCACTGGGGTATGGCCGTTGATTTTCAACGTTGGTGG
CCTAGCGATTTGAGACGTGCGGGCAGGATGGTCCCCCTCTCCTCCTCCTC
ATCCTCCGCCTCCGCCTCTTCTCCTCCTCCTCGTCCCTTAACCGCCACCG
TCGCTTCCACCCATGCACTTTCTCAGCCCATACCTGCACTGCACGCACCA
CTGCTTCCCTCCTCATTTTCCTCCGACGAGCCGCCTCTGACTCTCTACGA
AGACGGGTATTTGAAGCTCACCCCCACAAAGCTTAAAGTGAAGTGCTATT
TTTTCCCGTTCGGTTTAGCCAAGACCATCCCACTTAAGGACATAAAAAAA back to top
|