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Properties
| Property Name | Value |
|---|
| TranscriptId | 642699 |
| Track | FilteredModels2 |
| ProteinId | 642613 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_37 | supercontig | scaffold_37:4577..5767 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9720 ID=mRNA_9720|Name=jgi.p|Nanoce1779_2|642613|organism=Nannochloropsis oceanica|type=mRNA|length=624bp
ATGGCTTACCAGCTTCGCTGCCTGGGTCTCTCCCTCCTCTTTGCCTCGCT
CGTCTCGGGGGCCTGGAACCCATTCGCTGACCTTTCTCAAGCATCTCTGC
CCACGTCGACCGCAATGTCGGAGAGACGGACGGAGTATGCGAAGGATAAG
GCGTCTGACACCAAAGACGCAGTGACTACCAAGGCTGAGGCAGCGAAGAA
AAAGTCCGCTAAGGCGTCAGAGCAGGGTAAAGAGTCGTTGCATAATATGA
AGGACAAGCTGAGCGACAAGTACGACACAGTGAAAGCGCAAGCCAAGTGT
GTGGCAAGCAAGACGACGGAGGGCATGAAGGAGGGAGTGGACAGCACCAA
GTCCACCTTGGCGACGGGCAGGCACAAAATCAAGGCGGTGGGAAAACACT
GTCGAGGTCTTGGGGGATATGAAGAGACGGGCTACGACAAATACCTGCAT
GGCAAGGCCCAAGCAAATCAACTGGGTGCACAGTGCCGAGGAGGGGCAGC
TCGTGACATGATTAAGAAAGGCCGGCCGCCCTTGCGTTCGGAGCAGACGG
TGCCTGCCGAGTCTTTTAAGGAGCGCTACGCCAAGGAGAAGAGGGAGACG
GAGGAGAGGCAGCGTCATTGGTAG back to topprotein sequence of jgi.p|Nanoce1779_2|642613 >mRNA_9720-protein ID=mRNA_9720-protein|Name=jgi.p|Nanoce1779_2|642613|organism=Nannochloropsis oceanica|type=polypeptide|length=208bp
MAYQLRCLGLSLLFASLVSGAWNPFADLSQASLPTSTAMSERRTEYAKDK
ASDTKDAVTTKAEAAKKKSAKASEQGKESLHNMKDKLSDKYDTVKAQAKC
VASKTTEGMKEGVDSTKSTLATGRHKIKAVGKHCRGLGGYEETGYDKYLH
GKAQANQLGAQCRGGAARDMIKKGRPPLRSEQTVPAESFKERYAKEKRET
EERQRHW* back to topmRNA from alignment at scaffold_37:4577..5767- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9720 ID=mRNA_9720|Name=jgi.p|Nanoce1779_2|642613|organism=Nannochloropsis oceanica|type=mRNA|length=1191bp|location=Sequence derived from alignment at scaffold_37:4577..5767- (Nannochloropsis oceanica)
ATGGCTTACCAGCTTCGCTGCCTGGGTCTCTCCCTCCTCTTTGCCTCGCT
CGTCTCGGGGGCCTGGAACCCATTCGCTGACCTTTCTCAAGCATCTCTGC
CCACGTCGACCGCAATGTCGGAGAGACGGACGGTACCCTTACCAGCAGCA
CGGGGAGGGCTGGTCGTTCCGCCTGTGCGTGGCGGGGGCTTCCTGTGGTG
GACATCCACGGAAGAGAAAGGTGAACTTGCAAGGAAGACGCCCAAAATCT
TGGTTCTGGGGAAAGGAGTATGCGAAGGATAAGGCGTCTGACACCAAAGA
CGCAGTGACTACCAAGGCTGAGGCAGCGAAGAAAAAGTCCGCTAAGGCGT
CAGAGCAGGGTAAAGAGTCGTTGCATAATATGAAGGACAAGCTGAGCGAC
AAGTACGACACAGTGAAAGCGCAAGCCAAGTGTGTGGCAAGCAAGACGAC
GGAGGGCATGAAGGAGGGAGTGGACAGCACCAAGTCCACCTTGGCGACGG
GCAGGCACAAAATCAAGGCGGTGGGAAAACACTGTCGAGGTCTTGGGGGA
TATGAAGAGACGGGCTACGACAAATACCTGCATGGCAAGGCCCAAGCAAA
TCAACTGGGTGCACAGTGCCGAGGAGGGGGTGGAGGAAGGGATGGAAAAA
ACCAAAGGGCTTTGAGTTGGATCATAGAGGTGCTTGGGTGGCCTTTTCGT
TCACGTAGGGTGGTAACGACGACGACGATCCGCGACCGAGGCGTGATGAG
CAGGGAGGAGGGGTGGACCCTTTGTTCTGGAGGAAGAAAATTTGGTGACG
GCTCCCAAGAGCGTGGATGATGCATTGGAAGAGTTTGAGACGTGCAGGTG
CATAGGGAGGGAGGGAAGGAGGGAGGGAAGAAGGGAGGGAGGGAGAGATC
TTTTGACTCAAAAATCCCTCTCTTAATCAATAAAATGAATAAGATTGATT
GCCACACGCCACTTACTCTCTCCTTCCATTAATCTTCCTTCTTCCCCACC
CACACAGCAAGTTGATTCAATGACCGAGGAGGAGGCCCAGAAGACCCCGC
AATCTGTTTCAAGCAGCTCGTGACATGATTAAGAAAGGCCGGCCGCCCTT
GCGTTCGGAGCAGACGGTGCCTGCCGAGTCTTTTAAGGAGCGCTACGCCA
AGGAGAAGAGGGAGACGGAGGAGAGGCAGCGTCATTGGTAG back to topCoding sequence (CDS) from alignment at scaffold_37:4577..5767- >mRNA_9720 ID=mRNA_9720|Name=jgi.p|Nanoce1779_2|642613|organism=Nannochloropsis oceanica|type=CDS|length=1872bp|location=Sequence derived from alignment at scaffold_37:4577..5767- (Nannochloropsis oceanica)
CAGCTCGTGACATGATTAAGAAAGGCCGGCCGCCCTTGCGTTCGGAGCAG
ACGGTGCCTGCCGAGTCTTTTAAGGAGCGCTACGCCAAGGAGAAGAGGGA
GACGGAGGAGAGGCAGCGTCATTGGTAGGAGTATGCGAAGGATAAGGCGT
CTGACACCAAAGACGCAGTGACTACCAAGGCTGAGGCAGCGAAGAAAAAG
TCCGCTAAGGCGTCAGAGCAGGGTAAAGAGTCGTTGCATAATATGAAGGA
CAAGCTGAGCGACAAGTACGACACAGTGAAAGCGCAAGCCAAGTGTGTGG
CAAGCAAGACGACGGAGGGCATGAAGGAGGGAGTGGACAGCACCAAGTCC
ACCTTGGCGACGGGCAGGCACAAAATCAAGGCGGTGGGAAAACACTGTCG
AGGTCTTGGGGGATATGAAGAGACGGGCTACGACAAATACCTGCATGGCA
AGGCCCAAGCAAATCAACTGGGTGCACAGTGCCGAGGAGGGGATGGCTTA
CCAGCTTCGCTGCCTGGGTCTCTCCCTCCTCTTTGCCTCGCTCGTCTCGG
GGGCCTGGAACCCATTCGCTGACCTTTCTCAAGCATCTCTGCCCACGTCG
ACCGCAATGTCGGAGAGACGGACGCAGCTCGTGACATGATTAAGAAAGGC
CGGCCGCCCTTGCGTTCGGAGCAGACGGTGCCTGCCGAGTCTTTTAAGGA
GCGCTACGCCAAGGAGAAGAGGGAGACGGAGGAGAGGCAGCGTCATTGGT
AGGAGTATGCGAAGGATAAGGCGTCTGACACCAAAGACGCAGTGACTACC
AAGGCTGAGGCAGCGAAGAAAAAGTCCGCTAAGGCGTCAGAGCAGGGTAA
AGAGTCGTTGCATAATATGAAGGACAAGCTGAGCGACAAGTACGACACAG
TGAAAGCGCAAGCCAAGTGTGTGGCAAGCAAGACGACGGAGGGCATGAAG
GAGGGAGTGGACAGCACCAAGTCCACCTTGGCGACGGGCAGGCACAAAAT
CAAGGCGGTGGGAAAACACTGTCGAGGTCTTGGGGGATATGAAGAGACGG
GCTACGACAAATACCTGCATGGCAAGGCCCAAGCAAATCAACTGGGTGCA
CAGTGCCGAGGAGGGGATGGCTTACCAGCTTCGCTGCCTGGGTCTCTCCC
TCCTCTTTGCCTCGCTCGTCTCGGGGGCCTGGAACCCATTCGCTGACCTT
TCTCAAGCATCTCTGCCCACGTCGACCGCAATGTCGGAGAGACGGACGCA
GCTCGTGACATGATTAAGAAAGGCCGGCCGCCCTTGCGTTCGGAGCAGAC
GGTGCCTGCCGAGTCTTTTAAGGAGCGCTACGCCAAGGAGAAGAGGGAGA
CGGAGGAGAGGCAGCGTCATTGGTAGGAGTATGCGAAGGATAAGGCGTCT
GACACCAAAGACGCAGTGACTACCAAGGCTGAGGCAGCGAAGAAAAAGTC
CGCTAAGGCGTCAGAGCAGGGTAAAGAGTCGTTGCATAATATGAAGGACA
AGCTGAGCGACAAGTACGACACAGTGAAAGCGCAAGCCAAGTGTGTGGCA
AGCAAGACGACGGAGGGCATGAAGGAGGGAGTGGACAGCACCAAGTCCAC
CTTGGCGACGGGCAGGCACAAAATCAAGGCGGTGGGAAAACACTGTCGAG
GTCTTGGGGGATATGAAGAGACGGGCTACGACAAATACCTGCATGGCAAG
GCCCAAGCAAATCAACTGGGTGCACAGTGCCGAGGAGGGGATGGCTTACC
AGCTTCGCTGCCTGGGTCTCTCCCTCCTCTTTGCCTCGCTCGTCTCGGGG
GCCTGGAACCCATTCGCTGACCTTTCTCAAGCATCTCTGCCCACGTCGAC
CGCAATGTCGGAGAGACGGACG back to top
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