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Properties
Property Name | Value |
TranscriptId | 633674 |
Track | FilteredModels2 |
ProteinId | 633588 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_38 | supercontig | scaffold_38:133985..136060 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9692 ID=mRNA_9692|Name=jgi.p|Nanoce1779_2|633588|organism=Nannochloropsis oceanica|type=mRNA|length=1193bp AACAGACAAGTGGGACATGAACTCCCCGGAGGTGCTGGCCGAAGCCTTGT CCGCGGCAGAAGGTGGCGCCATTTCCACCGCTGTGCTTTATCCGCTTGAG GTAATTAAGACCGTCATCCAAGCCAGCAAGGGCAAGAAAAAGGCAGAGAC AAAGCCGTCAGCTGCGAGTAGCTCGACCTGGAATGAAGAGCAAGCACGGG CTGAAGAAGGTGAAGCCAGCCCCATTGCTGCTGCCGCCGCTGCCACCGTC ACTGCCATCACTCTTGCTTCTGGCAGCGCGGCGGAGAAAGAGAGGAAGGG AGGGGAGGATGCAGCCAAGCCCTTGACAAGCCGCGAGGTGGCCCAGGACA TTTACAAGCGGGCGGGCGTGACGGGATTCTTCGGTGGGGTCCAGTACGCG TCGCTGCAAAGTGCGTTGGAAAAATCGATTTATTTTTATGCCTACAGCAC TATGAAGGGCATCACCAAGCTGCTGAATGGCGGCAGGTTCGGAGTGCGTG AGAACCTGATCGTCGGATACCTGAGCGAGGTCATCCACCTGCCCGTTACC GTCCCCCTGGAGGTGATCATCACGCGCATCATCACCAGCCAAGGCCGCGT CTCCTCTTGGGCGCAGGCCACGAAGGAGCTGCTGGAGGAAAACGGGGTTA AAGGCTTGTACAAAGGCATCACCACATATGGCGTCTTGTGCCTGAAGCCA GCCATCCAGTACACGGTCTTCGAGCAGCTCCGACGGGGCATCATCTCCTT CCTCTCGCGGCGACAAGGGGTCCCAGTCAAGGCCCTAACGGCTTGGCAAG CTTTCCTCCTCGGTGCGCTCTCTCGGGCCATCGCCACCCTCCTCGTCTTC CCTTTCATACGTGTCCGCAAAGTGCTCATGGCGCAAAGCAAGGGCCGCGA CGAGGGAGGGAGCGAGGGAGGGAGGGAGGCGGTGGCGGACAGTGCGTGGG TCACCCTCAAGGCGACGGTGAAGGAGGAGGGCGTGCACGGTCTCTACCGA GGTGAGTCATATTGATGGACAGTGCTCTTTGCCCTCCCTCGTCATCGCCT TCCCCCCCTTCCCCTATTCCTCTGCCCTTGCGTCCTCCATCCTCATCCCC GCCGTTTTTCCTCCCTCTTTCCTTCCTCTTTGGCTTCCTCCTCCCCTCCC TCCCCTCCCTCCTCCTTCCCAGGCATGGCCCCGGAGCTGACCC back to topprotein sequence of jgi.p|Nanoce1779_2|633588 >mRNA_9692-protein ID=mRNA_9692-protein|Name=jgi.p|Nanoce1779_2|633588|organism=Nannochloropsis oceanica|type=polypeptide|length=333bp MNSPEVLAEALSAAEGGAISTAVLYPLEVIKTVIQASKGKKKAETKPSAA SSSTWNEEQARAEEGEASPIAAAAAATVTAITLASGSAAEKERKGGEDAA KPLTSREVAQDIYKRAGVTGFFGGVQYASLQSALEKSIYFYAYSTMKGIT KLLNGGRFGVRENLIVGYLSEVIHLPVTVPLEVIITRIITSQGRVSSWAQ ATKELLEENGVKGLYKGITTYGVLCLKPAIQYTVFEQLRRGIISFLSRRQ GVPVKALTAWQAFLLGALSRAIATLLVFPFIRVRKVLMAQSKGRDEGGSE GGREAVADSAWVTLKATVKEEGVHGLYRGESY* back to topmRNA from alignment at scaffold_38:133985..136060+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9692 ID=mRNA_9692|Name=jgi.p|Nanoce1779_2|633588|organism=Nannochloropsis oceanica|type=mRNA|length=2076bp|location=Sequence derived from alignment at scaffold_38:133985..136060+ (Nannochloropsis oceanica) AACAGACAAGTGGGACATGAACTCCCCGGAGGTGCTGGCCGAAGCCTTGT
CCGCGGCAGAAGGTGGCGCCATTTCCACCGCTGTGCTTTATCCGCTTGAG
GTAAGAAGGTGGAGGGCGGGAGGGCGGGAGGGCGGGAGGGCGGGAGGGCA
GGAGGGCGGGAGGGAACGGGGGATGAATCAGAGCTGATGCGCATTGACAT
CTCCGTAAGGTGTCTAGGTAGTAGGCCCATGAATGAGTGCCTGTATCAGT
GTTGCCAGACGATCGACAAACTACCAGGGGCACCCCTTCACCCCTGCCAT
CCAAATCCCCGCCACCGCCCCCATTCTCTTTCCATCCCTCCCTCACCCTA
TACCCAAAGGTAATTAAGACCGTCATCCAAGCCAGCAAGGGCAAGAAAAA
GGCAGAGACAAAGCCGTCAGCTGCGAGTAGCTCGACCTGGAATGAAGAGC
AAGCACGGGCTGAAGAAGGTGAAGCCAGCCCCATTGCTGCTGCCGCCGCT
GCCACCGTCACTGCCATCACTCTTGCTTCTGGCAGCGCGGCGGAGAAAGA
GAGGAAGGGAGGGGAGGATGCAGCCAAGCCCTTGACAAGCCGCGAGGTGG
CCCAGGACATTTACAAGCGGGCGGGCGTGACGGGATTCTTCGGTGGGGTC
CAGTACGCGTCGCTGCAAAGTGCGTTGGAAAAATCGATTTATTTTTATGC
CTACAGCACTATGAAGGGCATCACCAAGCTGCTGAATGGCGGCAGGTACG
GAGGGAGGGGGGGAGGAAGGGAAGAGAAGAAAGGAGGGCCAAGGAAAAAT
TGAAGTGCAGTTGACGTATGATGATATTAGGCATTTTATTCATCCACACT
TGACGTACCCCAAAGGTTCGGAGTGCGTGAGAACCTGATCGTCGGATACC
TGAGCGAGGTCATCCACCTGCCCGTTACCGGTACGTGCTACTTGCCGTCC
TGTGCAAGCCCCTCCTCCTACCATCCCTTCCCACATCTATTTGAATCGCC
AATGCACCATCGCCAGTTACCTCTAGGCCTCCCTCCCACCCCTCCCACCC
CTTCCTCCCTCAGTCCCCCTGGAGGTGATCATCACGCGCATCATCACCAG
CCAAGGCCGCGTCTCCTCTTGGGCGCAGGCCACGAAGGAGCTGCTGGAGG
AAAACGGGGTTAAAGGCTTGTACAAAGGCATCACCACATATGTGAGGAGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGCAGGATTTGTGTACAA
TCTACTCCTGCATCCACTTGTGTGTCCGAAGAAGTCCTCCCTTCGCGCCA
TACTTCCTCTGCCTCCCTCCCTCCCTCCCTCCCCCCTCTTTTCTCTTAAT
CCCTACTTACAGGGCGTCTTGTGCCTGAAGCCAGCCATCCAGTACACGGT
CTTCGAGCAGCTCCGACGGGGCATCATCTCCTTCCTCTCGCGGCGACAAG
GGGGTGCGCTGGAGGGAGGGCGGGAAGGAGGGAGGGAGATTCATACCTAG
AACACATTCTCATTTCTCAACACTTCTTCTCCCCCTCCCTCCTTCCCTCC
CTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCTCTCCCTCCCTCCCTCCCT
CCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCTC
CAGTCCCAGTCAAGGCCCTAACGGCTTGGCAAGCTTTCCTCCTCGGTGCG
CTCTCTCGGGCCATCGCCACCCTCCTCGTCTTCCCTTTCATACGTGTCCG
CAAAGTGCTCATGGCGCAAAGCAAGGGCCGCGACGAGGGAGGGAGCGAGG
GAGGGAGGGAGGCGGTGGCGGACAGTGCGTGGGTCACCCTCAAGGCGACG
GTGAAGGAGGAGGGCGTGCACGGTCTCTACCGAGGTGAGTCATATTGATG
GACAGTGCTCTTTGCCCTCCCTCGTCATCGCCTTCCCCCCCTTCCCCTAT
TCCTCTGCCCTTGCGTCCTCCATCCTCATCCCCGCCGTTTTTCCTCCCTC
TTTCCTTCCTCTTTGGCTTCCTCCTCCCCTCCCTCCCCTCCCTCCTCCTT
CCCAGGCATGGCCCCGGAGCTGACCC back to topCoding sequence (CDS) from alignment at scaffold_38:133985..136060+ >mRNA_9692 ID=mRNA_9692|Name=jgi.p|Nanoce1779_2|633588|organism=Nannochloropsis oceanica|type=CDS|length=5994bp|location=Sequence derived from alignment at scaffold_38:133985..136060+ (Nannochloropsis oceanica) ATGAACTCCCCGGAGGTGCTGGCCGAAGCCTTGTCCGCGGCAGAAGGTGG CGCCATTTCCACCGCTGTGCTTTATCCGCTTGAGGTAATTAAGACCGTCA TCCAAGCCAGCAAGGGCAAGAAAAAGGCAGAGACAAAGCCGTCAGCTGCG AGTAGCTCGACCTGGAATGAAGAGCAAGCACGGGCTGAAGAAGGTGAAGC CAGCCCCATTGCTGCTGCCGCCGCTGCCACCGTCACTGCCATCACTCTTG CTTCTGGCAGCGCGGCGGAGAAAGAGAGGAAGGGAGGGGAGGATGCAGCC AAGCCCTTGACAAGCCGCGAGGTGGCCCAGGACATTTACAAGCGGGCGGG CGTGACGGGATTCTTCGGTGGGGTCCAGTACGCGTCGCTGCAAAGTGCGT TGGAAAAATCGATTTATTTTTATGCCTACAGCACTATGAAGGGCATCACC AAGCTGCTGAATGGCGGCAGGTTCGGAGTGCGTGAGAACCTGATCGTCGG ATACCTGAGCGAGGTCATCCACCTGCCCGTTACCGTCCCCCTGGAGGTGA TCATCACGCGCATCATCACCAGCCAAGGCCGCGTCTCCTCTTGGGCGCAG GCCACGAAGGAGCTGCTGGAGGAAAACGGGGTTAAAGGCTTGTACAAAGG CATCACCACATATGGCGTCTTGTGCCTGAAGCCAGCCATCCAGTACACGG TCTTCGAGCAGCTCCGACGGGGCATCATCTCCTTCCTCTCGCGGCGACAA GGGGTCCCAGTCAAGGCCCTAACGGCTTGGCAAGCTTTCCTCCTCGGTGC GCTCTCTCGGGCCATCGCCACCCTCCTCGTCTTCCCTTTCATACGTGTCC GCAAAGTGCTCATGGCGCAAAGCAAGGGCCGCGACGAGGGAGGGAGCGAG GGAGGGAGGGAGGCGGTGGCGGACAGTGCGTGGGTCACCCTCAAGGCGAC GGTGAAGGAGGAGGGCGTGCACGGTCTCTACCGAGGTGAGTCATATTGAA TGAACTCCCCGGAGGTGCTGGCCGAAGCCTTGTCCGCGGCAGAAGGTGGC GCCATTTCCACCGCTGTGCTTTATCCGCTTGAGGTAATTAAGACCGTCAT CCAAGCCAGCAAGGGCAAGAAAAAGGCAGAGACAAAGCCGTCAGCTGCGA GTAGCTCGACCTGGAATGAAGAGCAAGCACGGGCTGAAGAAGGTGAAGCC AGCCCCATTGCTGCTGCCGCCGCTGCCACCGTCACTGCCATCACTCTTGC TTCTGGCAGCGCGGCGGAGAAAGAGAGGAAGGGAGGGGAGGATGCAGCCA AGCCCTTGACAAGCCGCGAGGTGGCCCAGGACATTTACAAGCGGGCGGGC GTGACGGGATTCTTCGGTGGGGTCCAGTACGCGTCGCTGCAAAGTGCGTT GGAAAAATCGATTTATTTTTATGCCTACAGCACTATGAAGGGCATCACCA AGCTGCTGAATGGCGGCAGGTTCGGAGTGCGTGAGAACCTGATCGTCGGA TACCTGAGCGAGGTCATCCACCTGCCCGTTACCGTCCCCCTGGAGGTGAT CATCACGCGCATCATCACCAGCCAAGGCCGCGTCTCCTCTTGGGCGCAGG CCACGAAGGAGCTGCTGGAGGAAAACGGGGTTAAAGGCTTGTACAAAGGC ATCACCACATATGGCGTCTTGTGCCTGAAGCCAGCCATCCAGTACACGGT CTTCGAGCAGCTCCGACGGGGCATCATCTCCTTCCTCTCGCGGCGACAAG GGGTCCCAGTCAAGGCCCTAACGGCTTGGCAAGCTTTCCTCCTCGGTGCG CTCTCTCGGGCCATCGCCACCCTCCTCGTCTTCCCTTTCATACGTGTCCG CAAAGTGCTCATGGCGCAAAGCAAGGGCCGCGACGAGGGAGGGAGCGAGG GAGGGAGGGAGGCGGTGGCGGACAGTGCGTGGGTCACCCTCAAGGCGACG GTGAAGGAGGAGGGCGTGCACGGTCTCTACCGAGGTGAGTCATATTGAAT GAACTCCCCGGAGGTGCTGGCCGAAGCCTTGTCCGCGGCAGAAGGTGGCG CCATTTCCACCGCTGTGCTTTATCCGCTTGAGGTAATTAAGACCGTCATC CAAGCCAGCAAGGGCAAGAAAAAGGCAGAGACAAAGCCGTCAGCTGCGAG TAGCTCGACCTGGAATGAAGAGCAAGCACGGGCTGAAGAAGGTGAAGCCA GCCCCATTGCTGCTGCCGCCGCTGCCACCGTCACTGCCATCACTCTTGCT TCTGGCAGCGCGGCGGAGAAAGAGAGGAAGGGAGGGGAGGATGCAGCCAA GCCCTTGACAAGCCGCGAGGTGGCCCAGGACATTTACAAGCGGGCGGGCG TGACGGGATTCTTCGGTGGGGTCCAGTACGCGTCGCTGCAAAGTGCGTTG GAAAAATCGATTTATTTTTATGCCTACAGCACTATGAAGGGCATCACCAA GCTGCTGAATGGCGGCAGGTTCGGAGTGCGTGAGAACCTGATCGTCGGAT ACCTGAGCGAGGTCATCCACCTGCCCGTTACCGTCCCCCTGGAGGTGATC ATCACGCGCATCATCACCAGCCAAGGCCGCGTCTCCTCTTGGGCGCAGGC CACGAAGGAGCTGCTGGAGGAAAACGGGGTTAAAGGCTTGTACAAAGGCA TCACCACATATGGCGTCTTGTGCCTGAAGCCAGCCATCCAGTACACGGTC TTCGAGCAGCTCCGACGGGGCATCATCTCCTTCCTCTCGCGGCGACAAGG GGTCCCAGTCAAGGCCCTAACGGCTTGGCAAGCTTTCCTCCTCGGTGCGC TCTCTCGGGCCATCGCCACCCTCCTCGTCTTCCCTTTCATACGTGTCCGC AAAGTGCTCATGGCGCAAAGCAAGGGCCGCGACGAGGGAGGGAGCGAGGG AGGGAGGGAGGCGGTGGCGGACAGTGCGTGGGTCACCCTCAAGGCGACGG TGAAGGAGGAGGGCGTGCACGGTCTCTACCGAGGTGAGTCATATTGAATG AACTCCCCGGAGGTGCTGGCCGAAGCCTTGTCCGCGGCAGAAGGTGGCGC CATTTCCACCGCTGTGCTTTATCCGCTTGAGGTAATTAAGACCGTCATCC AAGCCAGCAAGGGCAAGAAAAAGGCAGAGACAAAGCCGTCAGCTGCGAGT AGCTCGACCTGGAATGAAGAGCAAGCACGGGCTGAAGAAGGTGAAGCCAG CCCCATTGCTGCTGCCGCCGCTGCCACCGTCACTGCCATCACTCTTGCTT CTGGCAGCGCGGCGGAGAAAGAGAGGAAGGGAGGGGAGGATGCAGCCAAG CCCTTGACAAGCCGCGAGGTGGCCCAGGACATTTACAAGCGGGCGGGCGT GACGGGATTCTTCGGTGGGGTCCAGTACGCGTCGCTGCAAAGTGCGTTGG AAAAATCGATTTATTTTTATGCCTACAGCACTATGAAGGGCATCACCAAG CTGCTGAATGGCGGCAGGTTCGGAGTGCGTGAGAACCTGATCGTCGGATA CCTGAGCGAGGTCATCCACCTGCCCGTTACCGTCCCCCTGGAGGTGATCA TCACGCGCATCATCACCAGCCAAGGCCGCGTCTCCTCTTGGGCGCAGGCC ACGAAGGAGCTGCTGGAGGAAAACGGGGTTAAAGGCTTGTACAAAGGCAT CACCACATATGGCGTCTTGTGCCTGAAGCCAGCCATCCAGTACACGGTCT TCGAGCAGCTCCGACGGGGCATCATCTCCTTCCTCTCGCGGCGACAAGGG GTCCCAGTCAAGGCCCTAACGGCTTGGCAAGCTTTCCTCCTCGGTGCGCT CTCTCGGGCCATCGCCACCCTCCTCGTCTTCCCTTTCATACGTGTCCGCA AAGTGCTCATGGCGCAAAGCAAGGGCCGCGACGAGGGAGGGAGCGAGGGA GGGAGGGAGGCGGTGGCGGACAGTGCGTGGGTCACCCTCAAGGCGACGGT GAAGGAGGAGGGCGTGCACGGTCTCTACCGAGGTGAGTCATATTGAATGA ACTCCCCGGAGGTGCTGGCCGAAGCCTTGTCCGCGGCAGAAGGTGGCGCC ATTTCCACCGCTGTGCTTTATCCGCTTGAGGTAATTAAGACCGTCATCCA AGCCAGCAAGGGCAAGAAAAAGGCAGAGACAAAGCCGTCAGCTGCGAGTA GCTCGACCTGGAATGAAGAGCAAGCACGGGCTGAAGAAGGTGAAGCCAGC CCCATTGCTGCTGCCGCCGCTGCCACCGTCACTGCCATCACTCTTGCTTC TGGCAGCGCGGCGGAGAAAGAGAGGAAGGGAGGGGAGGATGCAGCCAAGC CCTTGACAAGCCGCGAGGTGGCCCAGGACATTTACAAGCGGGCGGGCGTG ACGGGATTCTTCGGTGGGGTCCAGTACGCGTCGCTGCAAAGTGCGTTGGA AAAATCGATTTATTTTTATGCCTACAGCACTATGAAGGGCATCACCAAGC TGCTGAATGGCGGCAGGTTCGGAGTGCGTGAGAACCTGATCGTCGGATAC CTGAGCGAGGTCATCCACCTGCCCGTTACCGTCCCCCTGGAGGTGATCAT CACGCGCATCATCACCAGCCAAGGCCGCGTCTCCTCTTGGGCGCAGGCCA CGAAGGAGCTGCTGGAGGAAAACGGGGTTAAAGGCTTGTACAAAGGCATC ACCACATATGGCGTCTTGTGCCTGAAGCCAGCCATCCAGTACACGGTCTT CGAGCAGCTCCGACGGGGCATCATCTCCTTCCTCTCGCGGCGACAAGGGG TCCCAGTCAAGGCCCTAACGGCTTGGCAAGCTTTCCTCCTCGGTGCGCTC TCTCGGGCCATCGCCACCCTCCTCGTCTTCCCTTTCATACGTGTCCGCAA AGTGCTCATGGCGCAAAGCAAGGGCCGCGACGAGGGAGGGAGCGAGGGAG GGAGGGAGGCGGTGGCGGACAGTGCGTGGGTCACCCTCAAGGCGACGGTG AAGGAGGAGGGCGTGCACGGTCTCTACCGAGGTGAGTCATATTGAATGAA CTCCCCGGAGGTGCTGGCCGAAGCCTTGTCCGCGGCAGAAGGTGGCGCCA TTTCCACCGCTGTGCTTTATCCGCTTGAGGTAATTAAGACCGTCATCCAA GCCAGCAAGGGCAAGAAAAAGGCAGAGACAAAGCCGTCAGCTGCGAGTAG CTCGACCTGGAATGAAGAGCAAGCACGGGCTGAAGAAGGTGAAGCCAGCC CCATTGCTGCTGCCGCCGCTGCCACCGTCACTGCCATCACTCTTGCTTCT GGCAGCGCGGCGGAGAAAGAGAGGAAGGGAGGGGAGGATGCAGCCAAGCC CTTGACAAGCCGCGAGGTGGCCCAGGACATTTACAAGCGGGCGGGCGTGA CGGGATTCTTCGGTGGGGTCCAGTACGCGTCGCTGCAAAGTGCGTTGGAA AAATCGATTTATTTTTATGCCTACAGCACTATGAAGGGCATCACCAAGCT GCTGAATGGCGGCAGGTTCGGAGTGCGTGAGAACCTGATCGTCGGATACC TGAGCGAGGTCATCCACCTGCCCGTTACCGTCCCCCTGGAGGTGATCATC ACGCGCATCATCACCAGCCAAGGCCGCGTCTCCTCTTGGGCGCAGGCCAC GAAGGAGCTGCTGGAGGAAAACGGGGTTAAAGGCTTGTACAAAGGCATCA CCACATATGGCGTCTTGTGCCTGAAGCCAGCCATCCAGTACACGGTCTTC GAGCAGCTCCGACGGGGCATCATCTCCTTCCTCTCGCGGCGACAAGGGGT CCCAGTCAAGGCCCTAACGGCTTGGCAAGCTTTCCTCCTCGGTGCGCTCT CTCGGGCCATCGCCACCCTCCTCGTCTTCCCTTTCATACGTGTCCGCAAA GTGCTCATGGCGCAAAGCAAGGGCCGCGACGAGGGAGGGAGCGAGGGAGG GAGGGAGGCGGTGGCGGACAGTGCGTGGGTCACCCTCAAGGCGACGGTGA AGGAGGAGGGCGTGCACGGTCTCTACCGAGGTGAGTCATATTGA back to top
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