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Properties
| Property Name | Value |
|---|
| TranscriptId | 607419 |
| Track | FilteredModels2 |
| ProteinId | 607333 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_38 | supercontig | scaffold_38:98452..101083 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9682 ID=mRNA_9682|Name=jgi.p|Nanoce1779_2|607333|organism=Nannochloropsis oceanica|type=mRNA|length=2558bp
GAACGAACAACGCACTCTTTCAAGCCACTGGTTGACAGGCTACATGAAGA
CATGTGTACATATTCTAAACTCTAGGTTGAGTCCCTGAGCGATTGATAGT
CCACATGCTTCGTGCTTAGAGATTATGCGTATGACGACGGTGATGATGTG
TGTGTGCCATCTGCGTGCCATCTGGCAAAATCTGGCAAACGATGTACTCT
TAGAGATTCCGTCCTCCTTCGTGCAGTGGACTCGCACATCGCTCCAAGCA
CAGGCCTTTAAGCTCTTTGGGCCTGAGCCTTGTCACACTCAGACGGAAGC
TGCGCATTATTCATCGTTTCCTTGTCGCATGCTCGGGTTGCTCGCTCTGG
TTGCGTAGCTTACGTGAGCGACTCCAAAATGCAATAGAATTTAGAACCAT
ATGGGCCCACGGAATGTACATGTTCTTTATTATCGTGCACCCCAAAAGGA
CTGCTGTGGGGAGGATTATGCACTCATGTCCGTTTATAGTGCACAGTGAA
CTGTATTGAGTGGTAAACGTGTCCATGTGCATTTGTGTGCGAAGAGCGCA
GGTAGACAGATTCTAGTAGAGACATGGTGGGGTTTGAGAGACGGTCAGTG
GGACAAGGACATTCCGGTAGCACACACCGTATCCCTCATGCATGCACATG
TTGTTTACAGTGTAAATGCGGGGTGAATTTCGACTACGCAGGGTTCTATT
TATTCCTTACCCTTTCCATCCTCCCTCTCTCTCCTTCTCACAGAAGCAAT
CCCTTCCCCCTATTCTTCGGATTCTTATTAATCAGGTAAATGTCGTGAGT
GGGGTTTATCTTGCATCTCTGAGAGTGACATTCCTAAGACAGTATCAGCA
TGAATTAGCATGAATTTTATACATGTTTCCCTCTCTTACTCATCTTTGTT
TTGCTCCACTCTTTCTAAACACATCCTCTTCATCCTCACCTCCTTCTTCT
CTTCCCCTATATCACCTCCGAAAGCAATGGCACTTATCTTTCCATCTTCA
CAAACAATTGTCACCTACACCCTTGACTCTGAAATTAACAACGACTTCCT
CACCCGCCTGCTACCCTTCTCTACTCATTCCATCTGCCTCCTCCTTCCTC
TAGAATGTCTAGAGTAGGAATCTAGGTCACTGAACCATTCACAACCACTT
CAATCGGTACTGCTCACAATGTACCCAAAGCTATCTTCTGGCTCTCTTCC
ATGCATATAAATCTTTGACAGCTCGCTGCCCCGTTTTAGATGAGCCGTAT
CGTGGCCCCTCGTCTTCCTCTTGTCCCACCCCTCCCTCCCTCATCTCCTT
CCTGCTCTTCTCTCCTGACCTCCTCCCCCAATCCCATCTCACCACTCCAC
CCTTTTTTCCCCTTATTTTGAACAGGGAAATGAACGACCATTTTTCAAAA
AGAGGTCGTGGCTTTTTCGCCCCTCACCCTCTACCGCATCATGTGCTGCC
CACATATGCATTTTCAAGTAAAAGCTTGCCAATCTCCCAGATTTTTACCT
TTCAAAGCATCCTCCCCCCCCCCTGATGATACAGCAATGAAGCTGAGTGG
CGCCTTCTTCATCACCCTTTTCGCCTCGCTCGTGTTTCATGTCGTCGGGG
ACTGTCCGAGTTTAAGGCCATTTGCTGAGACGAGCGTGGTGAATGGCCAA
GGTGCCTTCTACAAAGTCCGAATCGCCGGGGGCTCAGAGGCCATCAAAAA
TGCAACCTTTTCGATCACTCTGCCCGATGGTGTGAGTATTCGTGACTTTG
AAGTCTGGCCGAGACGTCGAGACCCCTTGCAAAACGGTACCGTATTGACC
TGGAGTAATGTGTCCATGCGCCCATATATGCGCTCTAGTTTCCACGTGAC
ATTGGGCGTGAATCTGACTTCCGTAATTGGGTTGAATGGATCGACGGGCT
GCACCTCGGGCGAGATCTCCTTTCAATCTACTCTGAGCGACGGCGATCAC
TGCAATGTGGATGCGCCAGCCATAAGCACGAAGGTGGAAAATGTGACTTC
CGGGCAGGGGGATAGATGTGGCGGTAGTTCTACTCCCTACACCGCGAAGA
ACCAGTCCGTGTTCTCCTGGGGGACGTATAAACCTTTTGACGCAGCGAAC
CTGCACATCAATGGTATCCAGAACTGTCTAGATGCATGCGCTGACGCCTC
TGGCTTCTTTGTGGCCTGGAAGCCTAATCCAGAGGCTGACGACTGCTATT
GCCAGTCGAAATCTCAGTATCTTGTTGACGGTGTTGAAAAGGACACTGCG
CTTTCTGGTTACACCATCTTTGAGAATCCGGCTGAATTGCATGTGCGACG
AAATTAATCTGGTTCCATCTGTTTTTCGTACTTTCTGCAGTTTATTTTTG
ATATGTCACCTTGGAGGAAAGCGGGAGATGGCATAATGGCAGGTCCTATT
TTCTTACTATAAAATGTATTTTACGCGTCGCTGTACATGTATTCTATGCG
TCAAATTTAATACTCCAAAGTTTTTTGAGCTTTCAGCTGTGCGAGCGATA
GACTGTTGCATTGTGGAAAAATAAAAGCATGAAGTGAACTCCGAGAGAGT
CTGTGGAA back to topprotein sequence of jgi.p|Nanoce1779_2|607333 >mRNA_9682-protein ID=mRNA_9682-protein|Name=jgi.p|Nanoce1779_2|607333|organism=Nannochloropsis oceanica|type=polypeptide|length=289bp
MCCPHMHFQVKACQSPRFLPFKASSPPPDDTAMKLSGAFFITLFASLVFH
VVGDCPSLRPFAETSVVNGQGAFYKVRIAGGSEAIKNATFSITLPDGVSI
RDFEVWPRRRDPLQNGTVLTWSNVSMRPYMRSSFHVTLGVNLTSVIGLNG
STGCTSGEISFQSTLSDGDHCNVDAPAISTKVENVTSGQGDRCGGSSTPY
TAKNQSVFSWGTYKPFDAANLHINGIQNCLDACADASGFFVAWKPNPEAD
DCYCQSKSQYLVDGVEKDTALSGYTIFENPAELHVRRN* back to topmRNA from alignment at scaffold_38:98452..101083- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9682 ID=mRNA_9682|Name=jgi.p|Nanoce1779_2|607333|organism=Nannochloropsis oceanica|type=mRNA|length=2632bp|location=Sequence derived from alignment at scaffold_38:98452..101083- (Nannochloropsis oceanica)
GAACGAACAACGCACTCTTTCAAGCCACTGGTTGACAGGCTACATGAAGA
CATGTGTACATATTCTAAACTCTAGGTTGAGTCCCTGAGCGATTGATAGT
CCACATGCTTCGTGCTTAGAGATTATGCGTATGACGACGGTGATGATGTG
TGTGTGCCATCTGCGTGCCATCTGGCAAAATCTGGCAAACGATGTACTCT
TAGAGATTCCGTCCTCCTTCGTGCAGTGGACTCGCACATCGCTCCAAGCA
CAGGCCTTTAAGCTCTTTGGGCCTGAGCCTTGTCACACTCAGACGGAAGC
TGCGCATTATTCATCGTTTCCTTGTCGCATGCTCGGGTTGCTCGCTCTGG
TTGCGTAGCTTACGTGAGCGACTCCAAAATGCAATAGAATTTAGAACCAT
ATGGGCCCACGGAATGTACATGTTCTTTATTATCGTGCACCCCAAAAGGA
CTGCTGTGGGGAGGATTATGCACTCATGTCCGTTTATAGTGCACAGTGAA
CTGTATTGAGTGGTAAACGTGTCCATGTGCATTTGTGTGCGAAGAGCGCA
GGTAGACAGATTCTAGTAGAGACATGGTGGGGTTTGAGAGACGGTCAGTG
GGACAAGGACATTCCGGTAGCACACACCGTATCCCTCATGCATGCACATG
TTGTTTACAGTGTAAATGCGGGGTGAATTTCGACTACGCAGGGTTCTATT
TATTCCTTACCCTTTCCATCCTCCCTCTCTCTCCTTCTCACAGAAGCAAT
CCCTTCCCCCTATTCTTCGGATTCTTATTAATCAGGTAAATGTCGTGAGT
GGGGTTTATCTTGCATCTCTGAGAGTGACATTCCTAAGACAGTATCAGCA
TGAATTAGCATGAATTTTATACATGTTTCCCTCTCTTACTCATCTTTGTT
TTGCTCCACTCTTTCTAAACACATCCTCTTCATCCTCACCTCCTTCTTCT
CTTCCCCTATATCACCTCCGAAAGCAATGGCACTTATCTTTCCATCTTCA
CAAACAATTGTCACCTACACCCTTGACTCTGAAATTAACAACGACTTCCT
CACCCGCCTGCTACCCTTCTCTACTCATTCCATCTGCCTCCTCCTTCCTC
TAGAATGTCTAGAGTAGGAATCTAGGTCACTGAACCATTCACAACCACTT
CAATCGGTACTGCTCACAATGTACCCAAAGCTATCTTCTGGCTCTCTTCC
ATGCATATAAATCTTTGACAGCTCGCTGCCCCGTTTTAGATGAGCCGTAT
CGTGGCCCCTCGTCTTCCTCTTGTCCCACCCCTCCCTCCCTCATCTCCTT
CCTGCTCTTCTCTCCTGACCTCCTCCCCCAATCCCATCTCACCACTCCAC
CCTTTTTTCCCCTTATTTTGAACAGGGAAATGAACGACCATTTTTCAAAA
AGAGGTCGTGGCTTTTTCGCCCCTCACCCTCTACCGCATCATGTGCTGCC
CACATATGCATTTTCAAGTAAAAGCTTGCCAATCTCCCAGATTTTTACCT
TTCAAAGCATCCTCCCCCCCCCCTGATGATACAGCAATGAAGCTGAGTGG
CGCCTTCTTCATCACCCTTTTCGCCTCGCTCGTGTTTCATGTCGTCGGGG
ACTGTCCGAGTTTAAGGCCATTTGCTGAGACGAGCGTGGTGAATGGCCAA
GGTGCCTTCTACAAAGTCCGAATCGCCGGGGGCTCAGAGGCCATCAAAAA
TGCAACCTTTTCGGTAAGAATATTTCAAGTCACGTGGCAGCACGCACGGC
CAAGTGACTCATACACTTTTCATGCTTTCATATGTAGATCACTCTGCCCG
ATGGTGTGAGTATTCGTGACTTTGAAGTCTGGCCGAGACGTCGAGACCCC
TTGCAAAACGGTACCGTATTGACCTGGAGTAATGTGTCCATGCGCCCATA
TATGCGCTCTAGTTTCCACGTGACATTGGGCGTGAATCTGACTTCCGTAA
TTGGGTTGAATGGATCGACGGGCTGCACCTCGGGCGAGATCTCCTTTCAA
TCTACTCTGAGCGACGGCGATCACTGCAATGTGGATGCGCCAGCCATAAG
CACGAAGGTGGAAAATGTGACTTCCGGGCAGGGGGATAGATGTGGCGGTA
GTTCTACTCCCTACACCGCGAAGAACCAGTCCGTGTTCTCCTGGGGGACG
TATAAACCTTTTGACGCAGCGAACCTGCACATCAATGGTATCCAGAACTG
TCTAGATGCATGCGCTGACGCCTCTGGCTTCTTTGTGGCCTGGAAGCCTA
ATCCAGAGGCTGACGACTGCTATTGCCAGTCGAAATCTCAGTATCTTGTT
GACGGTGTTGAAAAGGACACTGCGCTTTCTGGTTACACCATCTTTGAGAA
TCCGGCTGAATTGCATGTGCGACGAAATTAATCTGGTTCCATCTGTTTTT
CGTACTTTCTGCAGTTTATTTTTGATATGTCACCTTGGAGGAAAGCGGGA
GATGGCATAATGGCAGGTCCTATTTTCTTACTATAAAATGTATTTTACGC
GTCGCTGTACATGTATTCTATGCGTCAAATTTAATACTCCAAAGTTTTTT
GAGCTTTCAGCTGTGCGAGCGATAGACTGTTGCATTGTGGAAAAATAAAA
GCATGAAGTGAACTCCGAGAGAGTCTGTGGAA back to topCoding sequence (CDS) from alignment at scaffold_38:98452..101083- >mRNA_9682 ID=mRNA_9682|Name=jgi.p|Nanoce1779_2|607333|organism=Nannochloropsis oceanica|type=CDS|length=1734bp|location=Sequence derived from alignment at scaffold_38:98452..101083- (Nannochloropsis oceanica)
ATCACTCTGCCCGATGGTGTGAGTATTCGTGACTTTGAAGTCTGGCCGAG
ACGTCGAGACCCCTTGCAAAACGGTACCGTATTGACCTGGAGTAATGTGT
CCATGCGCCCATATATGCGCTCTAGTTTCCACGTGACATTGGGCGTGAAT
CTGACTTCCGTAATTGGGTTGAATGGATCGACGGGCTGCACCTCGGGCGA
GATCTCCTTTCAATCTACTCTGAGCGACGGCGATCACTGCAATGTGGATG
CGCCAGCCATAAGCACGAAGGTGGAAAATGTGACTTCCGGGCAGGGGGAT
AGATGTGGCGGTAGTTCTACTCCCTACACCGCGAAGAACCAGTCCGTGTT
CTCCTGGGGGACGTATAAACCTTTTGACGCAGCGAACCTGCACATCAATG
GTATCCAGAACTGTCTAGATGCATGCGCTGACGCCTCTGGCTTCTTTGTG
GCCTGGAAGCCTAATCCAGAGGCTGACGACTGCTATTGCCAGTCGAAATC
TCAGTATCTTGTTGACGGTGTTGAAAAGGACACTGCGCTTTCTGGTTACA
CCATCTTTGAGAATCCGGCTGAATTGCATGTGCGACGAAATTAAATGTGC
TGCCCACATATGCATTTTCAAGTAAAAGCTTGCCAATCTCCCAGATTTTT
ACCTTTCAAAGCATCCTCCCCCCCCCCTGATGATACAGCAATGAAGCTGA
GTGGCGCCTTCTTCATCACCCTTTTCGCCTCGCTCGTGTTTCATGTCGTC
GGGGACTGTCCGAGTTTAAGGCCATTTGCTGAGACGAGCGTGGTGAATGG
CCAAGGTGCCTTCTACAAAGTCCGAATCGCCGGGGGCTCAGAGGCCATCA
AAAATGCAACCTTTTCGATCACTCTGCCCGATGGTGTGAGTATTCGTGAC
TTTGAAGTCTGGCCGAGACGTCGAGACCCCTTGCAAAACGGTACCGTATT
GACCTGGAGTAATGTGTCCATGCGCCCATATATGCGCTCTAGTTTCCACG
TGACATTGGGCGTGAATCTGACTTCCGTAATTGGGTTGAATGGATCGACG
GGCTGCACCTCGGGCGAGATCTCCTTTCAATCTACTCTGAGCGACGGCGA
TCACTGCAATGTGGATGCGCCAGCCATAAGCACGAAGGTGGAAAATGTGA
CTTCCGGGCAGGGGGATAGATGTGGCGGTAGTTCTACTCCCTACACCGCG
AAGAACCAGTCCGTGTTCTCCTGGGGGACGTATAAACCTTTTGACGCAGC
GAACCTGCACATCAATGGTATCCAGAACTGTCTAGATGCATGCGCTGACG
CCTCTGGCTTCTTTGTGGCCTGGAAGCCTAATCCAGAGGCTGACGACTGC
TATTGCCAGTCGAAATCTCAGTATCTTGTTGACGGTGTTGAAAAGGACAC
TGCGCTTTCTGGTTACACCATCTTTGAGAATCCGGCTGAATTGCATGTGC
GACGAAATTAAATGTGCTGCCCACATATGCATTTTCAAGTAAAAGCTTGC
CAATCTCCCAGATTTTTACCTTTCAAAGCATCCTCCCCCCCCCCTGATGA
TACAGCAATGAAGCTGAGTGGCGCCTTCTTCATCACCCTTTTCGCCTCGC
TCGTGTTTCATGTCGTCGGGGACTGTCCGAGTTTAAGGCCATTTGCTGAG
ACGAGCGTGGTGAATGGCCAAGGTGCCTTCTACAAAGTCCGAATCGCCGG
GGGCTCAGAGGCCATCAAAAATGCAACCTTTTCG back to top
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