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Properties
| Property Name | Value |
|---|
| TranscriptId | 607395 |
| Track | FilteredModels2 |
| ProteinId | 607309 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_38 | supercontig | scaffold_38:85530..87665 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9679 ID=mRNA_9679|Name=jgi.p|Nanoce1779_2|607309|organism=Nannochloropsis oceanica|type=mRNA|length=1245bp
ACAGTGCACTAACAAGGGCAGTGCAGCGCGGGGAACACAAAAGGTACCAC
GCCAGGCGCGGAGTCTACGAGCCCATATCATTGCTCGCCGCCTCGCCAAC
ACGAGCGGCAGGATCAATTTGGCAAGTGCTTATTTATAGCCTGTCTCTGT
AGCGAAAATGGTGTGGCACGGGATTCATTTATCAGCCATAGCTAAGCAGC
TTCCAGCTATCCGCGGGTATTTGCAGGAAGATGGCCGGCTGATCGACCTG
CAAGACGAGACCTACCGGATGAGCCCCCTAATTTGGAGTTGTGTCATGGG
CCACGACGACGTTGCGGCTTGGTTACTTGCGCGCGGGGCCTCCGTGGATC
TAGTGGACTCGGGTGGACGTTCAGCATTGTTTTATGCCAGCAAGATAGGA
TACCTGGACCTGGTCTCGCTCCTATTGAAGCACAACCCCGACGTCCGAAA
GCAGAGCGCTGAAGGCATGACCCCCCTCATCATCGCCAGCGCCTGCGGGC
ACACTGAGGTAGTGCGTGCCTTGGTCGCCCACGTCTACCGCCCTCCAACC
ATCAGCAAGGAGGGAAAGGCCGCAGCAGCTGCTACCCCTCCCTCCTCCTC
CTCCCCAACAAGCGAGGCCGCCACAGGCTACCTGGACTTGGTGACAAAAC
GAGGCAATAGCGCCGTACATTGTGCCTCCCGCTTCCCGCAGATCCTCAAA
CTCTTGCTGCAGGTGCGTGCTATTGCCTCGGCCCCCCTTCCTTCCCTCCC
TCCCTCTTCCCCTTTCCACATGCTGTCCCCTTGAGTCTGTTCGTCGTCGC
TTTTCCCACGCCTACCACTCTCCTCTCTGCCCTTCCCTCCCTACCTCCCT
TCCTTCCTCTCTCTCTCTCTCTTCTCTCTCTCTCCTGCAGGAAGGAGCCA
ATCCCACCCTCGTGAACCACGAAGGGCACACGGCCCTCGAGATCTCGCTG
GCTAAAAACGTGCCGGCCTCGGTCCGGGTGCTCAAGAGGTTCCTGCAAGA
GAAGGAAACACGGCGCGCACGGCTCTTGTTCAAGGCCCGCGCCCTGTCAG
ACGCCGCCCACACCCTCCACCACACCCGCCACACGGCAAAAACCCGCGCA
GAGAAGCACCGCAAGTGTGTGGCTGTCGCCCCTGCATATGTGAAAGAGAG
GGTGGAGGAAGGGGCTGCCTTGCCGCTGGTGGTGGTGGGAGGAGAGGGGA
GGGAGGGCAGGAGGAGAAAGAGAAAGAGGGGGAAGGAGGGGGCTG back to topprotein sequence of jgi.p|Nanoce1779_2|607309 >mRNA_9679-protein ID=mRNA_9679-protein|Name=jgi.p|Nanoce1779_2|607309|organism=Nannochloropsis oceanica|type=polypeptide|length=209bp
MVWHGIHLSAIAKQLPAIRGYLQEDGRLIDLQDETYRMSPLIWSCVMGHD
DVAAWLLARGASVDLVDSGGRSALFYASKIGYLDLVSLLLKHNPDVRKQS
AEGMTPLIIASACGHTEVVRALVAHVYRPPTISKEGKAAAAATPPSSSSP
TSEAATGYLDLVTKRGNSAVHCASRFPQILKLLLQVRAIASAPLPSLPPS
SPFHMLSP* back to topmRNA from alignment at scaffold_38:85530..87665- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9679 ID=mRNA_9679|Name=jgi.p|Nanoce1779_2|607309|organism=Nannochloropsis oceanica|type=mRNA|length=2136bp|location=Sequence derived from alignment at scaffold_38:85530..87665- (Nannochloropsis oceanica)
ACAGTGCACTAACAAGGGCAGTGCAGCGCGGGGAACACAAAAGGTACCAC
GCCAGGCGCGGAGTCTACGAGCCCATATCATTGCTCGCCGCCTCGCCAAC
ACGAGCGGCAGGATCAATTTGGCAAGGTATGTTCCCCACGACCCTGTGTA
CCCCTACAACAGGAAAGACGCAGCAAACAAGCACATTTCTCATCTTTATC
CTTACATAAAGTGCTTATTTATAGCCTGTCTCTGTAGCGAAAATGGTGTG
GCACGGGATTCATTTATCAGCCATAGCTAAGCAGGTCTGTCGGGTATGGG
CGCTTTCCATTTCCGTGTCTTGACCTTCCCCTCTCCACCTCAACCCTCAC
ACTCACCTCCCCCTTACTCTCTGTTCATAACTATACCAAGCTTCCAGCTA
TCCGCGGGTATTTGCAGGAAGATGGCCGGCTGATCGACCTGCAAGACGAG
ACCTACCGGATGAGCCCCCTAATTTGGAGTGTACGTTGGGGGGGGGGGGA
AGGGAGGAAGGGAGGAAGGGAGGAGGATCGCAGCGTTGGGCTGCAAGGCT
GCGCGCTTTGAAATCCGTTGTATTCATATTTGGGGATGAATATGCATTAC
ACATTTCTCTCCCCTCAATCTTGAAACACTTCTCCTGACCTACCCCCCTT
CGTCCTTTCCTCTAGTGTGTCATGGGCCACGACGACGTTGCGGCTTGGTT
ACTTGCGCGCGGGGCCTCCGTGGATCTAGTGGACTCGGGTGGACGTTCAG
CATTGTTTTATGCCAGCAAGATAGGGTACGTGGAAAGGAAGGAGCGGGAA
GGGGAGGGGAAGAAGGAGTGGCATCGATATGGAAATTCTACCCTTTCGAG
TTGTTCGTCTATTCCCTCCTTTCCCCCGCTCCAGATACCTGGACCTGGTC
TCGCTCCTATTGAAGCACAACCCCGACGTCCGAAAGCAGAGCGCTGAAGG
TAAAGATGGAGGGGGGGGAGGGCCGGAAAGATGAAGGCAATGGGCTCACT
AGGTCAGACCTAGAAAGCCAATTGTGCATGTAGCCCGTCAATCACTGCCT
CCGTTCGCCTCCATCCCTCCCCAGGCATGACCCCCCTCATCATCGCCAGC
GCCTGCGGGCACACTGAGGTAGTGCGTGCCTTGGTCGCCCACGTCTACCG
CCCTCCAACCATCAGCAAGGAGGGAAAGGCCGCAGCAGCTGCTACCCCTC
CCTCCTCCTCCTCCCCAACAAGCGAGGCCGCCACAGGCTACCTGGACTTG
GTGACAAAACGAGGCAATAGCGCCGTACATTGTGCCTCCCGCTTCCCGCA
GATCCTCAAACTCTTGCTGCAGGTGCGTGCTATTGCCTCGGCCCCCCTTC
CTTCCCTCCCTCCCTCTTCCCCTTTCCACATGCTGTCCCCTTGAGTCTGT
TCGTCGTCGCTTTTCCCACGCCTACCACTCTCCTCTCTGCCCTTCCCTCC
CTACCTCCCTTCCTTCCTCTCTCTCTCTCTCTTCTCTCTCTCTCCTGCAG
GAAGGAGCCAATCCCACCCTCGTGAACCACGAAGGGCACACGGCCCTCGA
GATCTCGCTGGCTAAAAACGTGCCGGCCTCGGTCCGGGTGCTCAAGGTGG
GGGGGGGAGGGATAGAGGGAGGGAGGGAAGGACGAAAAGTAGGGGGGGAA
AAGGGAACACATGCAGGGCAGTAGTGACAAATCAAGCTCTTACCTCTTTC
TTTCCCCCTTCCTCTTTCCTTCCATTTCTCTCTCCTCCCTCATTTATTGT
AGAGGTTCCTGCAAGAGAAGGAAACACGGCGCGCACGGCTCTTGTTCAAG
GCCCGCGCCCTGTCAGACGCCGCCCACACCCTCCACCACACCCGCCACAC
GGCAAAAACCCGCGCAGAGAAGGTTTGTTGCTCTAATCTCCTAACCTTAC
CTTCCTCCCTCGCTGCCTTTCCTCCACTGACATGTTGGCTCCCGCACTCC
CCTTCTTACACTTCCATCTTTCCCTTCCTCTCTCCCTTCTCCCACAGCAC
CGCAAGTGTGTGGCTGTCGCCCCTGCATATGTGAAAGAGAGGGTGGAGGA
AGGGGCTGCCTTGCCGCTGGTGGTGGTGGGAGGAGAGGGGAGGGAGGGCA
GGAGGAGAAAGAGAAAGAGGGGGAAGGAGGGGGCTG back to topCoding sequence (CDS) from alignment at scaffold_38:85530..87665- >mRNA_9679 ID=mRNA_9679|Name=jgi.p|Nanoce1779_2|607309|organism=Nannochloropsis oceanica|type=CDS|length=3135bp|location=Sequence derived from alignment at scaffold_38:85530..87665- (Nannochloropsis oceanica)
GCATGACCCCCCTCATCATCGCCAGCGCCTGCGGGCACACTGAGGTAGTG
CGTGCCTTGGTCGCCCACGTCTACCGCCCTCCAACCATCAGCAAGGAGGG
AAAGGCCGCAGCAGCTGCTACCCCTCCCTCCTCCTCCTCCCCAACAAGCG
AGGCCGCCACAGGCTACCTGGACTTGGTGACAAAACGAGGCAATAGCGCC
GTACATTGTGCCTCCCGCTTCCCGCAGATCCTCAAACTCTTGCTGCAGGT
GCGTGCTATTGCCTCGGCCCCCCTTCCTTCCCTCCCTCCCTCTTCCCCTT
TCCACATGCTGTCCCCTTGAATACCTGGACCTGGTCTCGCTCCTATTGAA
GCACAACCCCGACGTCCGAAAGCAGAGCGCTGAAGTGTGTCATGGGCCAC
GACGACGTTGCGGCTTGGTTACTTGCGCGCGGGGCCTCCGTGGATCTAGT
GGACTCGGGTGGACGTTCAGCATTGTTTTATGCCAGCAAGATAGGCTTCC
AGCTATCCGCGGGTATTTGCAGGAAGATGGCCGGCTGATCGACCTGCAAG
ACGAGACCTACCGGATGAGCCCCCTAATTTGGAGTATGGTGTGGCACGGG
ATTCATTTATCAGCCATAGCTAAGCAGGCATGACCCCCCTCATCATCGCC
AGCGCCTGCGGGCACACTGAGGTAGTGCGTGCCTTGGTCGCCCACGTCTA
CCGCCCTCCAACCATCAGCAAGGAGGGAAAGGCCGCAGCAGCTGCTACCC
CTCCCTCCTCCTCCTCCCCAACAAGCGAGGCCGCCACAGGCTACCTGGAC
TTGGTGACAAAACGAGGCAATAGCGCCGTACATTGTGCCTCCCGCTTCCC
GCAGATCCTCAAACTCTTGCTGCAGGTGCGTGCTATTGCCTCGGCCCCCC
TTCCTTCCCTCCCTCCCTCTTCCCCTTTCCACATGCTGTCCCCTTGAATA
CCTGGACCTGGTCTCGCTCCTATTGAAGCACAACCCCGACGTCCGAAAGC
AGAGCGCTGAAGTGTGTCATGGGCCACGACGACGTTGCGGCTTGGTTACT
TGCGCGCGGGGCCTCCGTGGATCTAGTGGACTCGGGTGGACGTTCAGCAT
TGTTTTATGCCAGCAAGATAGGCTTCCAGCTATCCGCGGGTATTTGCAGG
AAGATGGCCGGCTGATCGACCTGCAAGACGAGACCTACCGGATGAGCCCC
CTAATTTGGAGTATGGTGTGGCACGGGATTCATTTATCAGCCATAGCTAA
GCAGGCATGACCCCCCTCATCATCGCCAGCGCCTGCGGGCACACTGAGGT
AGTGCGTGCCTTGGTCGCCCACGTCTACCGCCCTCCAACCATCAGCAAGG
AGGGAAAGGCCGCAGCAGCTGCTACCCCTCCCTCCTCCTCCTCCCCAACA
AGCGAGGCCGCCACAGGCTACCTGGACTTGGTGACAAAACGAGGCAATAG
CGCCGTACATTGTGCCTCCCGCTTCCCGCAGATCCTCAAACTCTTGCTGC
AGGTGCGTGCTATTGCCTCGGCCCCCCTTCCTTCCCTCCCTCCCTCTTCC
CCTTTCCACATGCTGTCCCCTTGAATACCTGGACCTGGTCTCGCTCCTAT
TGAAGCACAACCCCGACGTCCGAAAGCAGAGCGCTGAAGTGTGTCATGGG
CCACGACGACGTTGCGGCTTGGTTACTTGCGCGCGGGGCCTCCGTGGATC
TAGTGGACTCGGGTGGACGTTCAGCATTGTTTTATGCCAGCAAGATAGGC
TTCCAGCTATCCGCGGGTATTTGCAGGAAGATGGCCGGCTGATCGACCTG
CAAGACGAGACCTACCGGATGAGCCCCCTAATTTGGAGTATGGTGTGGCA
CGGGATTCATTTATCAGCCATAGCTAAGCAGGCATGACCCCCCTCATCAT
CGCCAGCGCCTGCGGGCACACTGAGGTAGTGCGTGCCTTGGTCGCCCACG
TCTACCGCCCTCCAACCATCAGCAAGGAGGGAAAGGCCGCAGCAGCTGCT
ACCCCTCCCTCCTCCTCCTCCCCAACAAGCGAGGCCGCCACAGGCTACCT
GGACTTGGTGACAAAACGAGGCAATAGCGCCGTACATTGTGCCTCCCGCT
TCCCGCAGATCCTCAAACTCTTGCTGCAGGTGCGTGCTATTGCCTCGGCC
CCCCTTCCTTCCCTCCCTCCCTCTTCCCCTTTCCACATGCTGTCCCCTTG
AATACCTGGACCTGGTCTCGCTCCTATTGAAGCACAACCCCGACGTCCGA
AAGCAGAGCGCTGAAGTGTGTCATGGGCCACGACGACGTTGCGGCTTGGT
TACTTGCGCGCGGGGCCTCCGTGGATCTAGTGGACTCGGGTGGACGTTCA
GCATTGTTTTATGCCAGCAAGATAGGCTTCCAGCTATCCGCGGGTATTTG
CAGGAAGATGGCCGGCTGATCGACCTGCAAGACGAGACCTACCGGATGAG
CCCCCTAATTTGGAGTATGGTGTGGCACGGGATTCATTTATCAGCCATAG
CTAAGCAGGCATGACCCCCCTCATCATCGCCAGCGCCTGCGGGCACACTG
AGGTAGTGCGTGCCTTGGTCGCCCACGTCTACCGCCCTCCAACCATCAGC
AAGGAGGGAAAGGCCGCAGCAGCTGCTACCCCTCCCTCCTCCTCCTCCCC
AACAAGCGAGGCCGCCACAGGCTACCTGGACTTGGTGACAAAACGAGGCA
ATAGCGCCGTACATTGTGCCTCCCGCTTCCCGCAGATCCTCAAACTCTTG
CTGCAGGTGCGTGCTATTGCCTCGGCCCCCCTTCCTTCCCTCCCTCCCTC
TTCCCCTTTCCACATGCTGTCCCCTTGAATACCTGGACCTGGTCTCGCTC
CTATTGAAGCACAACCCCGACGTCCGAAAGCAGAGCGCTGAAGTGTGTCA
TGGGCCACGACGACGTTGCGGCTTGGTTACTTGCGCGCGGGGCCTCCGTG
GATCTAGTGGACTCGGGTGGACGTTCAGCATTGTTTTATGCCAGCAAGAT
AGGCTTCCAGCTATCCGCGGGTATTTGCAGGAAGATGGCCGGCTGATCGA
CCTGCAAGACGAGACCTACCGGATGAGCCCCCTAATTTGGAGTATGGTGT
GGCACGGGATTCATTTATCAGCCATAGCTAAGCAG back to top
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