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Properties
| Property Name | Value |
|---|
| TranscriptId | 659500 |
| Track | FilteredModels2 |
| ProteinId | 659414 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_38 | supercontig | scaffold_38:63463..64654 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9673 ID=mRNA_9673|Name=jgi.p|Nanoce1779_2|659414|organism=Nannochloropsis oceanica|type=mRNA|length=1111bp
ATGGCGTCAACTGAGTGCTTTTCGATGAGCGAATTTGCTCTCACGGCGCA
CGTAGAGGCCAAGATGTACCCACCAATTGCAGCGCTAGGCGAGACCCCCC
TGCTAGTGCAAGAGATTCGAGCAGGTGTAATGGGTGCTTCGGTGGGACTG
CTGCCTGGCAGATGCTCCAAGATCATGAAAAAATACCTTCCGAGCACTGA
AAAGCAGCGACGAGCGTCAAAAGAGGACTTGTCGAGATTAACGGAGGAGG
AGAGAGTAGAGCGACGCAAGATACGTGCTCGCATGTACAATCGCATGTCT
CGCCACCGCCGCAATCAGCTGCATAGTCAATTGCGCAAGGACGTGAGTCG
CATGGGAATCTACAAGAATATTGTCGATGATGCGCCAGACATGATATGTG
TCATTTCCCCAGATATTCAGAGCCAGGTGCTATACATCAACAATGCCGCT
CGATGCGTCCTCCATACTGACCCCGCGCAGCTGGTGGGGTCCAGCTTCTG
GGACATCATCCACAAAAAAGAAAAGATGGCGCTGTTCAGGGCTCTCACAA
CCATCACCATCACCAAGTCGGCCGGGAAAGTGGAAAGGCTACGCTGTCGT
GTAGTCACCAACAACCCCGGTATCTATGTGTCTGTCAAGATGACGCTAGC
AAATGGGATGCAGGGCATTGTCTGTATTATGCGTCATGAAGATTCGAACA
ATCCTGCCATTTTGCGCGTGTCGCCTAATGAAAGGCCGTGAATCATATGG
AAGCAAGAAGAGGGTGATGAGGGAGTGAAGAAAGACACACACAGCGAGAA
GGGCGAGTAGGGCAGAGAGACTTGAAGAAGAGATCCACACACATCAATCC
TGTCCCCCTGTAAGATTTTTGCATGATGAGAGGTCAGACTAATCCCTCCC
CCCTTCCCCATCTATAGTGAGGGACTTTGAGACAAGTAAGAGGCGTGGCC
GACGGAATTGAAGAAAAAAGGAAAATACCATTTCTTGTTGTGGATTTCGA
ACGCTTTTTCCTGGTCTGCAGGCAGACTGTCCTGACCAAACTTTGGACGA
AAAGCACTTCATTCGGCAATCGTCCGGATCTATGATCGTGCACGAAATGC
AGGAAATACTT back to topprotein sequence of jgi.p|Nanoce1779_2|659414 >mRNA_9673-protein ID=mRNA_9673-protein|Name=jgi.p|Nanoce1779_2|659414|organism=Nannochloropsis oceanica|type=polypeptide|length=247bp
MASTECFSMSEFALTAHVEAKMYPPIAALGETPLLVQEIRAGVMGASVGL
LPGRCSKIMKKYLPSTEKQRRASKEDLSRLTEEERVERRKIRARMYNRMS
RHRRNQLHSQLRKDVSRMGIYKNIVDDAPDMICVISPDIQSQVLYINNAA
RCVLHTDPAQLVGSSFWDIIHKKEKMALFRALTTITITKSAGKVERLRCR
VVTNNPGIYVSVKMTLANGMQGIVCIMRHEDSNNPAILRVSPNERP* back to topmRNA from alignment at scaffold_38:63463..64654- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9673 ID=mRNA_9673|Name=jgi.p|Nanoce1779_2|659414|organism=Nannochloropsis oceanica|type=mRNA|length=1192bp|location=Sequence derived from alignment at scaffold_38:63463..64654- (Nannochloropsis oceanica)
ATGGCGTCAACTGAGTGCTTTTCGATGAGCGAATTTGCTCTCACGGCGCA
CGTAGAGGCCAAGATGTACCCACCAATTGCAGCGCTAGGCGAGACCCCCC
TGCTAGTGCAAGAGATTCGAGCAGGTGTAATGGGTGCTTCGGTGGGACTG
CTGCCTGGCAGATGCTCCAAGATCATGAAAAAATACCTTCCGGTAAGAAA
CATGGAATCTTTTGTATAGCCTCTTTTGGAAACTCACTATTTGTCCCCAT
CCACTCATCTTTCTTTGCAACAGAGCACTGAAAAGCAGCGACGAGCGTCA
AAAGAGGACTTGTCGAGATTAACGGAGGAGGAGAGAGTAGAGCGACGCAA
GATACGTGCTCGCATGTACAATCGCATGTCTCGCCACCGCCGCAATCAGC
TGCATAGTCAATTGCGCAAGGACGTGAGTCGCATGGGAATCTACAAGAAT
ATTGTCGATGATGCGCCAGACATGATATGTGTCATTTCCCCAGATATTCA
GAGCCAGGTGCTATACATCAACAATGCCGCTCGATGCGTCCTCCATACTG
ACCCCGCGCAGCTGGTGGGGTCCAGCTTCTGGGACATCATCCACAAAAAA
GAAAAGATGGCGCTGTTCAGGGCTCTCACAACCATCACCATCACCAAGTC
GGCCGGGAAAGTGGAAAGGCTACGCTGTCGTGTAGTCACCAACAACCCCG
GTATCTATGTGTCTGTCAAGATGACGCTAGCAAATGGGATGCAGGGCATT
GTCTGTATTATGCGTCATGAAGATTCGAACAATCCTGCCATTTTGCGCGT
GTCGCCTAATGAAAGGCCGTGAATCATATGGAAGCAAGAAGAGGGTGATG
AGGGAGTGAAGAAAGACACACACAGCGAGAAGGGCGAGTAGGGCAGAGAG
ACTTGAAGAAGAGATCCACACACATCAATCCTGTCCCCCTGTAAGATTTT
TGCATGATGAGAGGTCAGACTAATCCCTCCCCCCTTCCCCATCTATAGTG
AGGGACTTTGAGACAAGTAAGAGGCGTGGCCGACGGAATTGAAGAAAAAA
GGAAAATACCATTTCTTGTTGTGGATTTCGAACGCTTTTTCCTGGTCTGC
AGGCAGACTGTCCTGACCAAACTTTGGACGAAAAGCACTTCATTCGGCAA
TCGTCCGGATCTATGATCGTGCACGAAATGCAGGAAATACTT back to topCoding sequence (CDS) from alignment at scaffold_38:63463..64654- >mRNA_9673 ID=mRNA_9673|Name=jgi.p|Nanoce1779_2|659414|organism=Nannochloropsis oceanica|type=CDS|length=1482bp|location=Sequence derived from alignment at scaffold_38:63463..64654- (Nannochloropsis oceanica)
AGCACTGAAAAGCAGCGACGAGCGTCAAAAGAGGACTTGTCGAGATTAAC
GGAGGAGGAGAGAGTAGAGCGACGCAAGATACGTGCTCGCATGTACAATC
GCATGTCTCGCCACCGCCGCAATCAGCTGCATAGTCAATTGCGCAAGGAC
GTGAGTCGCATGGGAATCTACAAGAATATTGTCGATGATGCGCCAGACAT
GATATGTGTCATTTCCCCAGATATTCAGAGCCAGGTGCTATACATCAACA
ATGCCGCTCGATGCGTCCTCCATACTGACCCCGCGCAGCTGGTGGGGTCC
AGCTTCTGGGACATCATCCACAAAAAAGAAAAGATGGCGCTGTTCAGGGC
TCTCACAACCATCACCATCACCAAGTCGGCCGGGAAAGTGGAAAGGCTAC
GCTGTCGTGTAGTCACCAACAACCCCGGTATCTATGTGTCTGTCAAGATG
ACGCTAGCAAATGGGATGCAGGGCATTGTCTGTATTATGCGTCATGAAGA
TTCGAACAATCCTGCCATTTTGCGCGTGTCGCCTAATGAAAGGCCGTGAA
TGGCGTCAACTGAGTGCTTTTCGATGAGCGAATTTGCTCTCACGGCGCAC
GTAGAGGCCAAGATGTACCCACCAATTGCAGCGCTAGGCGAGACCCCCCT
GCTAGTGCAAGAGATTCGAGCAGGTGTAATGGGTGCTTCGGTGGGACTGC
TGCCTGGCAGATGCTCCAAGATCATGAAAAAATACCTTCCGAGCACTGAA
AAGCAGCGACGAGCGTCAAAAGAGGACTTGTCGAGATTAACGGAGGAGGA
GAGAGTAGAGCGACGCAAGATACGTGCTCGCATGTACAATCGCATGTCTC
GCCACCGCCGCAATCAGCTGCATAGTCAATTGCGCAAGGACGTGAGTCGC
ATGGGAATCTACAAGAATATTGTCGATGATGCGCCAGACATGATATGTGT
CATTTCCCCAGATATTCAGAGCCAGGTGCTATACATCAACAATGCCGCTC
GATGCGTCCTCCATACTGACCCCGCGCAGCTGGTGGGGTCCAGCTTCTGG
GACATCATCCACAAAAAAGAAAAGATGGCGCTGTTCAGGGCTCTCACAAC
CATCACCATCACCAAGTCGGCCGGGAAAGTGGAAAGGCTACGCTGTCGTG
TAGTCACCAACAACCCCGGTATCTATGTGTCTGTCAAGATGACGCTAGCA
AATGGGATGCAGGGCATTGTCTGTATTATGCGTCATGAAGATTCGAACAA
TCCTGCCATTTTGCGCGTGTCGCCTAATGAAAGGCCGTGAATGGCGTCAA
CTGAGTGCTTTTCGATGAGCGAATTTGCTCTCACGGCGCACGTAGAGGCC
AAGATGTACCCACCAATTGCAGCGCTAGGCGAGACCCCCCTGCTAGTGCA
AGAGATTCGAGCAGGTGTAATGGGTGCTTCGGTGGGACTGCTGCCTGGCA
GATGCTCCAAGATCATGAAAAAATACCTTCCG back to top
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