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Properties
| Property Name | Value |
|---|
| TranscriptId | 659481 |
| Track | FilteredModels2 |
| ProteinId | 659395 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_38 | supercontig | scaffold_38:4819..5890 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9659 ID=mRNA_9659|Name=jgi.p|Nanoce1779_2|659395|organism=Nannochloropsis oceanica|type=mRNA|length=917bp
GTATTTTTTTGTTTCCTCTACTGTCTTTTTGCTTTCCGTCCATTATATTG
GTGATAGCTTTTGTCGGGTAGACACCTAAAGATAGACAGTCACGGTGAAT
AGTGTGGCGCATCTATTTCTTGCCAGCAACGGCGCGTCCGGGCTCCCCCA
CTCTCCCATTTCGTATTCCTTGTGATTTCCGCCCCCCTCCCTTCCACCTT
TTGCCAGACAAGACTCATGCACAAGCATACATATACGCATGCACATACAC
ATTAGCTAATCATCCTTTCACACCCCACGACACATGAAACCCACAGCACA
ATCCCTTTCTTCCGACAACCATGAAGATGACTGCCTTTTCTATCCTCCTG
GCCGGCGTCGCCCTCTTCTCCGCCATGTCCGGTGTCATGGTCCAAGCTCA
AGATTTAGCAAATCCTCCAGGAATCAACAATTGTGGCAACGTAAGCCTTG
AGCTCATTCTCCTCGTTGACGTCTCGGGTAGCGTAAACGCCTCTGAGTTT
CAGCTTCAGAAGCTAGGGTATGTGAGCGCCTTTAACAATCCAGGTGTGCA
GAACAACATCGCCAGTCAACCCGGTGGGGTAGCCGTCACATTGGTGTACT
GGTCAGCTTCTGATGAACAACGTCAAGTAGTGAGATGGACCAAGCTTACA
GATGCCCAGTCGAGTATTGATTTTGCCACTGCTATTAATGCGCTACAGCA
ACCTCCTCTGCCATCGACTTTGCTGTCAATGATGTCTTTAGTGCAAGCGG
CTGTACCACAAGCAGTAAAATCATTGATATCTCAACAGATGGAATACAGA
ACGACCCAGACGAGTCGCCTAGCGAAACATTATTGCGCTTGCGAGCTGCC
CGAGATGCTGCTGAAAGCCAGGATATTACAATTAATGCCCTTGTCATCTT
GGGAGGCGGTCCCATAA back to topprotein sequence of jgi.p|Nanoce1779_2|659395 >mRNA_9659-protein ID=mRNA_9659-protein|Name=jgi.p|Nanoce1779_2|659395|organism=Nannochloropsis oceanica|type=polypeptide|length=199bp
MKMTAFSILLAGVALFSAMSGVMVQAQDLANPPGINNCGNVSLELILLVD
VSGSVNASEFQLQKLGYVSAFNNPGVQNNIASQPGGVAVTLVYWSASDEQ
RQVVRWTKLTDAQSSIDFATAINALQQPPLPSTLLSMMSLVQAAVPQAVK
SLISQQMEYRTTQTSRLAKHYCACELPEMLLKARILQLMPLSSWEAVP* back to topmRNA from alignment at scaffold_38:4819..5890- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9659 ID=mRNA_9659|Name=jgi.p|Nanoce1779_2|659395|organism=Nannochloropsis oceanica|type=mRNA|length=1072bp|location=Sequence derived from alignment at scaffold_38:4819..5890- (Nannochloropsis oceanica)
GTATTTTTTTGTTTCCTCTACTGTCTTTTTGCTTTCCGTCCATTATATTG
GTGATAGCTTTTGTCGGGTAGACACCTAAAGATAGACAGTCACGGTGAAT
AGTGTGGCGCATCTATTTCTTGCCAGCAACGGCGCGTCCGGGCTCCCCCA
CTCTCCCATTTCGTATTCCTTGTGATTTCCGCCCCCCTCCCTTCCACCTT
TTGCCAGACAAGACTCATGCACAAGCATACATATACGCATGCACATACAC
ATTAGCTAATCATCCTTTCACACCCCACGACACATGAAACCCACAGCACA
ATCCCTTTCTTCCGACAACCATGAAGATGACTGCCTTTTCTATCCTCCTG
GCCGGCGTCGCCCTCTTCTCCGCCATGGTAAGTTCCAACACGCCTATGTA
AACATGCATGAATGAAGTGCCTACCCCATAAATCGAGGTCGCGCTCCTTT
TCTCTCATGTCTCCCTCCTCCTCTCTTTCTTGCTCTACCCTTCCTTCCCT
TATCTTACAGTCCGGTGTCATGGTCCAAGCTCAAGATTTAGCAAATCCTC
CAGGAATCAACAATTGTGGCAACGTAAGCCTTGAGCTCATTCTCCTCGTT
GACGTCTCGGGTAGCGTAAACGCCTCTGAGTTTCAGCTTCAGAAGCTAGG
GTATGTGAGCGCCTTTAACAATCCAGGTGTGCAGAACAACATCGCCAGTC
AACCCGGTGGGGTAGCCGTCACATTGGTGTACTGGTCAGCTTCTGATGAA
CAACGTCAAGTAGTGAGATGGACCAAGCTTACAGATGCCCAGTCGAGTAT
TGATTTTGCCACTGCTATTAATGGTACGACCCGTCAATTTGATAGCGCTA
CAGCAACCTCCTCTGCCATCGACTTTGCTGTCAATGATGTCTTTAGTGCA
AGCGGCTGTACCACAAGCAGTAAAATCATTGATATCTCAACAGATGGAAT
ACAGAACGACCCAGACGAGTCGCCTAGCGAAACATTATTGCGCTTGCGAG
CTGCCCGAGATGCTGCTGAAAGCCAGGATATTACAATTAATGCCCTTGTC
ATCTTGGGAGGCGGTCCCATAA back to topCoding sequence (CDS) from alignment at scaffold_38:4819..5890- >mRNA_9659 ID=mRNA_9659|Name=jgi.p|Nanoce1779_2|659395|organism=Nannochloropsis oceanica|type=CDS|length=1791bp|location=Sequence derived from alignment at scaffold_38:4819..5890- (Nannochloropsis oceanica)
CGCTACAGCAACCTCCTCTGCCATCGACTTTGCTGTCAATGATGTCTTTA
GTGCAAGCGGCTGTACCACAAGCAGTAAAATCATTGATATCTCAACAGAT
GGAATACAGAACGACCCAGACGAGTCGCCTAGCGAAACATTATTGCGCTT
GCGAGCTGCCCGAGATGCTGCTGAAAGCCAGGATATTACAATTAATGCCC
TTGTCATCTTGGGAGGCGGTCCCATAATCCGGTGTCATGGTCCAAGCTCA
AGATTTAGCAAATCCTCCAGGAATCAACAATTGTGGCAACGTAAGCCTTG
AGCTCATTCTCCTCGTTGACGTCTCGGGTAGCGTAAACGCCTCTGAGTTT
CAGCTTCAGAAGCTAGGGTATGTGAGCGCCTTTAACAATCCAGGTGTGCA
GAACAACATCGCCAGTCAACCCGGTGGGGTAGCCGTCACATTGGTGTACT
GGTCAGCTTCTGATGAACAACGTCAAGTAGTGAGATGGACCAAGCTTACA
GATGCCCAGTCGAGTATTGATTTTGCCACTGCTATTAATGATGAAGATGA
CTGCCTTTTCTATCCTCCTGGCCGGCGTCGCCCTCTTCTCCGCCATGCGC
TACAGCAACCTCCTCTGCCATCGACTTTGCTGTCAATGATGTCTTTAGTG
CAAGCGGCTGTACCACAAGCAGTAAAATCATTGATATCTCAACAGATGGA
ATACAGAACGACCCAGACGAGTCGCCTAGCGAAACATTATTGCGCTTGCG
AGCTGCCCGAGATGCTGCTGAAAGCCAGGATATTACAATTAATGCCCTTG
TCATCTTGGGAGGCGGTCCCATAATCCGGTGTCATGGTCCAAGCTCAAGA
TTTAGCAAATCCTCCAGGAATCAACAATTGTGGCAACGTAAGCCTTGAGC
TCATTCTCCTCGTTGACGTCTCGGGTAGCGTAAACGCCTCTGAGTTTCAG
CTTCAGAAGCTAGGGTATGTGAGCGCCTTTAACAATCCAGGTGTGCAGAA
CAACATCGCCAGTCAACCCGGTGGGGTAGCCGTCACATTGGTGTACTGGT
CAGCTTCTGATGAACAACGTCAAGTAGTGAGATGGACCAAGCTTACAGAT
GCCCAGTCGAGTATTGATTTTGCCACTGCTATTAATGATGAAGATGACTG
CCTTTTCTATCCTCCTGGCCGGCGTCGCCCTCTTCTCCGCCATGCGCTAC
AGCAACCTCCTCTGCCATCGACTTTGCTGTCAATGATGTCTTTAGTGCAA
GCGGCTGTACCACAAGCAGTAAAATCATTGATATCTCAACAGATGGAATA
CAGAACGACCCAGACGAGTCGCCTAGCGAAACATTATTGCGCTTGCGAGC
TGCCCGAGATGCTGCTGAAAGCCAGGATATTACAATTAATGCCCTTGTCA
TCTTGGGAGGCGGTCCCATAATCCGGTGTCATGGTCCAAGCTCAAGATTT
AGCAAATCCTCCAGGAATCAACAATTGTGGCAACGTAAGCCTTGAGCTCA
TTCTCCTCGTTGACGTCTCGGGTAGCGTAAACGCCTCTGAGTTTCAGCTT
CAGAAGCTAGGGTATGTGAGCGCCTTTAACAATCCAGGTGTGCAGAACAA
CATCGCCAGTCAACCCGGTGGGGTAGCCGTCACATTGGTGTACTGGTCAG
CTTCTGATGAACAACGTCAAGTAGTGAGATGGACCAAGCTTACAGATGCC
CAGTCGAGTATTGATTTTGCCACTGCTATTAATGATGAAGATGACTGCCT
TTTCTATCCTCCTGGCCGGCGTCGCCCTCTTCTCCGCCATG back to top
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