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Properties
| Property Name | Value |
|---|
| TranscriptId | 633406 |
| Track | FilteredModels2 |
| ProteinId | 633320 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_31 | supercontig | scaffold_31:173744..175463 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9642 ID=mRNA_9642|Name=jgi.p|Nanoce1779_2|633320|organism=Nannochloropsis oceanica|type=mRNA|length=1325bp
CCCCAAAATAGAACAAATAAGAACCTCTCAACAAGTTTTTTTTCTCCTGC
TTTTTCATGCAGCACACACCATCAAACAAGTAAATCCCCCAGGTGTGCAC
CTTGCTTACATGCTGCCCCTTACTTCCTCCTTCACCCACCTCACACAACA
AATACACCACTCTGGCCGCCCACAGGGCGGGCGTATCCTCTAGTTTGCCA
AGATAATAAAGTCTAAGATACCTCATGCAATCATAGCTTTTTAGTTAGAG
CGAAGAGGCACCAGACTTATCGATTAGTTCGGTTGCAAGACACCTGAATT
GGAGGCGAAGTATGAAGCTGAAAACCTCAACGTCCTCAGCTACAAGTCTT
ATACAAATAACCTTTATAAGCTCATGGACACCAAAAGCCGGTGGAAAAAA
AAGTCAAGCAAAACCATCAAAGCTATGCTTTGATGAATACAGGTGATCAA
AGAACGGTAAGAAAACCTTAAGAGCACAGGCAATTTATACAAATGTGCAT
GATTTAAAACGAGAGCGCAAGTTCAATGCAATGCACTGATGGGTCCGCAA
TAATGCTTTAGTGCGAAATCTGTCGCAATCTGCTGCTTTACGCCTTATTC
TTCTCATATACCAACGTTGCCTGAGTGTATATACATTGCCATCATGACAT
AAACTCTGCGGTCTCTTACATCCTTTCAAAAGGCACAGAACTGTTGAGTT
CTTATCATGGTCCCAACTCGTAGAATACAAATTTTGACTCTGTCTCTCTT
GGGCATTATATTCTTTTGGGTAGCAAATCTTTTTTATCCTGATGGACAAC
GAAAGAGAATGCCGCTACTGCTCGCGCCTTGTAATCTGGCCCCTCATGAG
ACCAAGACTATGTTTGTAACAGCGCTAGTAGACTTGGGGGCCGATTACGA
TGTTAAATCGGTCGACGAGAGAATGAAACACTTCAATAAGCTAGCCGCGA
GTGGTATACCGCTTATCGTCTTCGTCAGTCCTACATTTTCTCCTCTCTTG
GAGAAAGTCGCTGAGCAACATCCAAATATTAAGAGAGTGATTACAATTGA
CTGGACCATATTTGACACGTACAAGATAATCAATAGTTTCCAAAATCTTA
AACTACCAGGCGTCAGAGGGGAAAAAAAGGATACTTTTCAATATATGGCA
CTCCAGCTTTCCAAGCCAGAGTTTCTGTACATGGCACTCAACCATACACT
ATCCTCACACTTGGCATGGATCGATTTTAATGTAGCACATGTGTTCAAAA
CAGAAAATGCGATCTTAAAATTGCAAGCAATCGGTCAAATGTCTTTGAAG
GTGCCATTGATGGCGTTTGCTGGTA back to topprotein sequence of jgi.p|Nanoce1779_2|633320 >mRNA_9642-protein ID=mRNA_9642-protein|Name=jgi.p|Nanoce1779_2|633320|organism=Nannochloropsis oceanica|type=polypeptide|length=206bp
MVPTRRIQILTLSLLGIIFFWVANLFYPDGQRKRMPLLLAPCNLAPHETK
TMFVTALVDLGADYDVKSVDERMKHFNKLAASGIPLIVFVSPTFSPLLEK
VAEQHPNIKRVITIDWTIFDTYKIINSFQNLKLPGVRGEKKDTFQYMALQ
LSKPEFLYMALNHTLSSHLAWIDFNVAHVFKTENAILKLQAIGQMSLKVP
LMAFAG back to topmRNA from alignment at scaffold_31:173744..175463- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9642 ID=mRNA_9642|Name=jgi.p|Nanoce1779_2|633320|organism=Nannochloropsis oceanica|type=mRNA|length=1720bp|location=Sequence derived from alignment at scaffold_31:173744..175463- (Nannochloropsis oceanica)
CCCCAAAATAGAACAAATAAGAACCTCTCAACAAGTTTTTTTTCTCCTGC
TTTTTCATGCAGCACACACCATCAAACAAGTAAATCCCCCAGGTGTGCAC
CTTGCTTACATGCTGCCCCTTACTTCCTCCTTCACCCACCTCACACAACA
AATACACCACTCTGGCCGCCCACAGGGCGGGCGTATCCTCTAGTTTGCCA
AGATAATAAAGTCTAAGATACCTCATGCAATCATAGCTTTTTAGTTAGAG
CGAAGAGGCACCAGACTTATCGATTAGTTCGGTTGCAAGACACCTGAATT
GGAGGCGAAGTATGAAGCTGAAAACCTCAACGTCCTCAGCTACAAGTCTT
ATACAAATAACCTTTATAAGCTCATGGACACCAAAAGCCGGTGGAAAAAA
AAGTCAAGGTATATGAAAATGTTTTGATGTCGAATATCGACGGTGTCGAA
AGTCTTTGGTCAGAATGCGGCTCTTTGACGCTTCATGTTGCGTGCTGGTC
TGTGAGGTTTCTAGCGTAATCTTGTCGCTGAATAGACACTTTTATGCATC
CTGCGAAACGTTTGCATTGCTTAGTGATGGCATATTCGTTGTTGTTGATG
ATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGAT
GATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGA
TGATGATGATGATGATGATGATGATATGGATGACGGCTGCACTCTGATGA
TCAAAGTACCTTTCTAACGCTATTTCTTATGTCTCGGTGACCGATGCCCC
CAGCAAAACCATCAAAGCTATGCTTTGATGAATACAGGTGATCAAAGAAC
GGTAAGAAAACCTTAAGAGCACAGGCAATTTATACAAATGTGCATGATTT
AAAACGAGAGCGCAAGTTCAATGCAATGCACTGATGGGTCCGCAATAATG
CTTTAGTGCGAAATCTGTCGCAATCTGCTGCTTTACGCCTTATTCTTCTC
ATATACCAACGTTGCCTGAGTGTATATACATTGCCATCATGACATAAACT
CTGCGGTCTCTTACATCCTTTCAAAAGGCACAGAACTGTTGAGTTCTTAT
CATGGTCCCAACTCGTAGAATACAAATTTTGACTCTGTCTCTCTTGGGCA
TTATATTCTTTTGGGTAGCAAATCTTTTTTATCCTGATGGACAACGAAAG
AGAATGCCGCTACTGCTCGCGCCTTGTAATCTGGCCCCTCATGAGACCAA
GACTATGTTTGTAACAGCGCTAGTAGACTTGGGGGCCGATTACGATGTTA
AATCGGTCGACGAGAGAATGAAACACTTCAATAAGCTAGCCGCGAGTGGT
ATACCGCTTATCGTCTTCGTCAGTCCTACATTTTCTCCTCTCTTGGAGAA
AGTCGCTGAGCAACATCCAAATATTAAGAGAGTGATTACAATTGACTGGA
CCATATTTGACACGTACAAGATAATCAATAGTTTCCAAAATCTTAAACTA
CCAGGCGTCAGAGGGGAAAAAAAGGATACTTTTCAATATATGGCACTCCA
GCTTTCCAAGCCAGAGTTTCTGTACATGGCACTCAACCATACACTATCCT
CACACTTGGCATGGATCGATTTTAATGTAGCACATGTGTTCAAAACAGAA
AATGCGATCTTAAAATTGCAAGCAATCGGTCAAATGTCTTTGAAGGTGCC
ATTGATGGCGTTTGCTGGTA back to topCoding sequence (CDS) from alignment at scaffold_31:173744..175463- >mRNA_9642 ID=mRNA_9642|Name=jgi.p|Nanoce1779_2|633320|organism=Nannochloropsis oceanica|type=CDS|length=618bp|location=Sequence derived from alignment at scaffold_31:173744..175463- (Nannochloropsis oceanica)
ATGGTCCCAACTCGTAGAATACAAATTTTGACTCTGTCTCTCTTGGGCAT
TATATTCTTTTGGGTAGCAAATCTTTTTTATCCTGATGGACAACGAAAGA
GAATGCCGCTACTGCTCGCGCCTTGTAATCTGGCCCCTCATGAGACCAAG
ACTATGTTTGTAACAGCGCTAGTAGACTTGGGGGCCGATTACGATGTTAA
ATCGGTCGACGAGAGAATGAAACACTTCAATAAGCTAGCCGCGAGTGGTA
TACCGCTTATCGTCTTCGTCAGTCCTACATTTTCTCCTCTCTTGGAGAAA
GTCGCTGAGCAACATCCAAATATTAAGAGAGTGATTACAATTGACTGGAC
CATATTTGACACGTACAAGATAATCAATAGTTTCCAAAATCTTAAACTAC
CAGGCGTCAGAGGGGAAAAAAAGGATACTTTTCAATATATGGCACTCCAG
CTTTCCAAGCCAGAGTTTCTGTACATGGCACTCAACCATACACTATCCTC
ACACTTGGCATGGATCGATTTTAATGTAGCACATGTGTTCAAAACAGAAA
ATGCGATCTTAAAATTGCAAGCAATCGGTCAAATGTCTTTGAAGGTGCCA
TTGATGGCGTTTGCTGGT back to top
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