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Properties
| Property Name | Value |
|---|
| TranscriptId | 605312 |
| Track | FilteredModels2 |
| ProteinId | 605226 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_31 | supercontig | scaffold_31:112260..113557 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9624 ID=mRNA_9624|Name=jgi.p|Nanoce1779_2|605226|organism=Nannochloropsis oceanica|type=mRNA|length=1041bp
CCCTTCCTCCTCCTCTTCCTCTTCATTTTCTTTTCTTGTTCCTCTTTTCT
CTTTGTCGTCTTTCTTGTCTTCTAGCTCGTTTATTTTTTCGATCTCCTTC
TGATGTTTGTGGATGACGGGACGACATGTCGAGAAGGAAGACGGCCGGAG
CTTTTCCTCCTCTTCCCCTCCTCCTCTTCCCCCCCCCCCCCCTTCTCCTC
TGCTCCCCCCTCCTCCCACCAGGCCCTCGTTGTCGTCATCCCCTGATTCC
TCGACCTCGTCTTGCTGCTGCAGCATCCGTTCCACCTCCTCGACTGCTCC
CTCCAGCCCCTCTGCCTCCTCGTACACTCTGTGCAGAGCATCTAGCGACA
GAACGCCTTCGAAGATCCGGCACAGTTCATCCCACGCCTTTAAGCTCAGG
CCTTCCCTCCGTCCCGCCACTCCCGGTGAGGGGCGGGCGACTCTCCTTCC
ACCTTTTCCACCTCCGCAGCAGCAGCTGCAGCGGCGGCGGCACCGGCAGC
CGAAGCGCCGGAGTCGCATCCCACAGCGCTGCTACCTTCATCTGTTATAA
GGAGCAATATGCCCAGAGCTCTGCATACATTGAAAAGAGTAAGTGATAAG
CATGCAATTTCTCACATCAATTCATCCCTGCTTCCGCCTTCCCTCCCTCT
TACCCTTCGGTACAGGGCGGCTTTACGTGTACAATCTATACTTTTCCATC
AAGTAAATTAAGATTTGCTTCATCGGTTCTTTCAAGATGCGATTTTTGCG
TGCCCATCTTCTATCTGTCCCTAATGTCCCATCCACCCTCCCTTCCTACC
TGGCCACGTCTCCATCCTCGCGTGATAAAACCGCCCTTACCGTGCCCCAC
GGCACTTTTCCATCTAACATTTCATGTAAGGCGTCAATATCCTGCTCGCT
ATACTCCTTGTCCTGGTGGTGGTGGTGATGTTTCTTCTTTCTGGCCATCT
TTTAGTTCTGGGAAACGTGTGGCCGCCACAAGAGGGAAGACGCTATAAGG
TCAAGGATGCAGGTCCGACTGATGCCTAGTTTCCGGCGCCT back to topprotein sequence of jgi.p|Nanoce1779_2|605226 >mRNA_9624-protein ID=mRNA_9624-protein|Name=jgi.p|Nanoce1779_2|605226|organism=Nannochloropsis oceanica|type=polypeptide|length=157bp
MSRRKTAGAFPPLPLLLFPPPPLLLCSPLLPPGPRCRHPLIPRPRLAAAA
SVPPPRLLPPAPLPPRTLCAEHLATERLRRSGTVHPTPLSSGLPSVPPLP
VRGGRLSFHLFHLRSSSCSGGGTGSRSAGVASHSAATFICYKEQYAQSSA
YIEKSK* back to topmRNA from alignment at scaffold_31:112260..113557+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9624 ID=mRNA_9624|Name=jgi.p|Nanoce1779_2|605226|organism=Nannochloropsis oceanica|type=mRNA|length=1298bp|location=Sequence derived from alignment at scaffold_31:112260..113557+ (Nannochloropsis oceanica)
CCCTTCCTCCTCCTCTTCCTCTTCATTTTCTTTTCTTGTTCCTCTTTTCT
CTTTGTCGTCTTTCTTGTCTTCTAGCTCGTTTATTTTTTCGATCTCCTTC
TGATGTTTGTGGATGACGGGACGACATGTCGAGAAGGAAGACGGCCGGAG
CTTTTCCTCCTCTTCCCCTCCTCCTCTTCCCCCCCCCCCCCCTTCTCCTC
TGCTCCCCCCTCCTCCCACCAGGCCCTCGTTGTCGTCATCCCCTGATTCC
TCGACCTCGTCTTGCTGCTGCAGCATCCGTTCCACCTCCTGTCAGTCGTA
TGCGGAGAGATCAAACCATCGCCCACAGCTTCCACCCTCCTTTCCCTCCT
CCCCTCCTCTCTCCTCTCTCCCTTCCTACCTCGACTGCTCCCTCCAGCCC
CTCTGCCTCCTCGTACACTCTGTGCAGAGCATCTAGCGACAGAACGCCTT
CGAAGATCCGGCACAGTTCATCCCACGCCTTTAAGCTCAGGCCTTCCCTC
CGTCCCGCCACTCCCGGTGAGGGGCGGGCGACTGAGGGAGGGAAGGGAGA
AGAAGGAAGATGAGGAGGAGTTATGAAAGAAGGGTTGGTAATTTTTGACG
CCGCTGAGGATAAATTGGCAGCACTGTCGTCGTTTTCCTGCTCCTGCTCC
TCGTCCCGAACCTCTTTGCTGCTCTCCTTCCCTCCCTCCTTCCCCACCTC
TCCTTCCACCTTTTCCACCTCCGCAGCAGCAGCTGCAGCGGCGGCGGCAC
CGGCAGCCGAAGCGCCGGAGTCGCATCCCACAGCGCTGCTACCTTCATCT
GTTATAAGGAGCAATATGCCCAGAGCTCTGCATACATTGAAAAGAGTAAG
TGATAAGCATGCAATTTCTCACATCAATTCATCCCTGCTTCCGCCTTCCC
TCCCTCTTACCCTTCGGTACAGGGCGGCTTTACGTGTACAATCTATACTT
TTCCATCAAGTAAATTAAGATTTGCTTCATCGGTTCTTTCAAGATGCGAT
TTTTGCGTGCCCATCTTCTATCTGTCCCTAATGTCCCATCCACCCTCCCT
TCCTACCTGGCCACGTCTCCATCCTCGCGTGATAAAACCGCCCTTACCGT
GCCCCACGGCACTTTTCCATCTAACATTTCATGTAAGGCGTCAATATCCT
GCTCGCTATACTCCTTGTCCTGGTGGTGGTGGTGATGTTTCTTCTTTCTG
GCCATCTTTTAGTTCTGGGAAACGTGTGGCCGCCACAAGAGGGAAGACGC
TATAAGGTCAAGGATGCAGGTCCGACTGATGCCTAGTTTCCGGCGCCT back to topCoding sequence (CDS) from alignment at scaffold_31:112260..113557+ >mRNA_9624 ID=mRNA_9624|Name=jgi.p|Nanoce1779_2|605226|organism=Nannochloropsis oceanica|type=CDS|length=1413bp|location=Sequence derived from alignment at scaffold_31:112260..113557+ (Nannochloropsis oceanica)
ATGTCGAGAAGGAAGACGGCCGGAGCTTTTCCTCCTCTTCCCCTCCTCCT
CTTCCCCCCCCCCCCCCTTCTCCTCTGCTCCCCCCTCCTCCCACCAGGCC
CTCGTTGTCGTCATCCCCTGATTCCTCGACCTCGTCTTGCTGCTGCAGCA
TCCGTTCCACCTCCTCGACTGCTCCCTCCAGCCCCTCTGCCTCCTCGTAC
ACTCTGTGCAGAGCATCTAGCGACAGAACGCCTTCGAAGATCCGGCACAG
TTCATCCCACGCCTTTAAGCTCAGGCCTTCCCTCCGTCCCGCCACTCCCG
GTGAGGGGCGGGCGACTCTCCTTCCACCTTTTCCACCTCCGCAGCAGCAG
CTGCAGCGGCGGCGGCACCGGCAGCCGAAGCGCCGGAGTCGCATCCCACA
GCGCTGCTACCTTCATCTGTTATAAGGAGCAATATGCCCAGAGCTCTGCA
TACATTGAAAAGAGTAAGTGAATGTCGAGAAGGAAGACGGCCGGAGCTTT
TCCTCCTCTTCCCCTCCTCCTCTTCCCCCCCCCCCCCCTTCTCCTCTGCT
CCCCCCTCCTCCCACCAGGCCCTCGTTGTCGTCATCCCCTGATTCCTCGA
CCTCGTCTTGCTGCTGCAGCATCCGTTCCACCTCCTCGACTGCTCCCTCC
AGCCCCTCTGCCTCCTCGTACACTCTGTGCAGAGCATCTAGCGACAGAAC
GCCTTCGAAGATCCGGCACAGTTCATCCCACGCCTTTAAGCTCAGGCCTT
CCCTCCGTCCCGCCACTCCCGGTGAGGGGCGGGCGACTCTCCTTCCACCT
TTTCCACCTCCGCAGCAGCAGCTGCAGCGGCGGCGGCACCGGCAGCCGAA
GCGCCGGAGTCGCATCCCACAGCGCTGCTACCTTCATCTGTTATAAGGAG
CAATATGCCCAGAGCTCTGCATACATTGAAAAGAGTAAGTGAATGTCGAG
AAGGAAGACGGCCGGAGCTTTTCCTCCTCTTCCCCTCCTCCTCTTCCCCC
CCCCCCCCCTTCTCCTCTGCTCCCCCCTCCTCCCACCAGGCCCTCGTTGT
CGTCATCCCCTGATTCCTCGACCTCGTCTTGCTGCTGCAGCATCCGTTCC
ACCTCCTCGACTGCTCCCTCCAGCCCCTCTGCCTCCTCGTACACTCTGTG
CAGAGCATCTAGCGACAGAACGCCTTCGAAGATCCGGCACAGTTCATCCC
ACGCCTTTAAGCTCAGGCCTTCCCTCCGTCCCGCCACTCCCGGTGAGGGG
CGGGCGACTCTCCTTCCACCTTTTCCACCTCCGCAGCAGCAGCTGCAGCG
GCGGCGGCACCGGCAGCCGAAGCGCCGGAGTCGCATCCCACAGCGCTGCT
ACCTTCATCTGTTATAAGGAGCAATATGCCCAGAGCTCTGCATACATTGA
AAAGAGTAAGTGA back to top
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