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Properties
| Property Name | Value |
|---|
| TranscriptId | 642384 |
| Track | FilteredModels2 |
| ProteinId | 642298 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_31 | supercontig | scaffold_31:92475..93797 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9619 ID=mRNA_9619|Name=jgi.p|Nanoce1779_2|642298|organism=Nannochloropsis oceanica|type=mRNA|length=546bp
ATGAGCCTGGCCACCCTCCAAGCCCACGCGCACTTGAATCTCCTATCCAT
TAAGGGCATTGTGTACGACGTCTCGGCTCAGGCACAGAAATGGGCACCAC
TCTGCGGGCACGATATCAGCCGAGTGCTGGCCAAGGCGCTTGAGGGCGAA
GACCTCGACCTCGCCTTGGTCGATCAGGGTCTTGCCGGCCTCTCGTACGA
TGAAATTCTCCATCTAGAAAAGCTGGTGGCTGCCTTCCAACAGGCCTTCC
CCGCCGTGGCCCACCTTCCACCGCACGAGCACCACACCCTCTTTGCCTCG
GAGGTGGGGGAGGGCGGGAGGGCGGGAGGGAAGGAAGGTGAGGAGAACGG
GGTGATGCTGCACGCATTGATTGAAGAGAAGGGAAGCAACTTGGAGCACA
TACGACTCCTCGTGGAGCACGGGGCGGATCTGGAGGCGAGGGCATTATTG
TACGACGGAGAAAGGGGATGGGAGCTGGCCAAACGGTTTGGGAGGGGGGA
GGAGGTGGAAGCACTCCTGCGGGTTGGAGGGGGGAAGGAGAAGTAG back to topprotein sequence of jgi.p|Nanoce1779_2|642298 >mRNA_9619-protein ID=mRNA_9619-protein|Name=jgi.p|Nanoce1779_2|642298|organism=Nannochloropsis oceanica|type=polypeptide|length=182bp
MSLATLQAHAHLNLLSIKGIVYDVSAQAQKWAPLCGHDISRVLAKALEGE
DLDLALVDQGLAGLSYDEILHLEKLVAAFQQAFPAVAHLPPHEHHTLFAS
EVGEGGRAGGKEGEENGVMLHALIEEKGSNLEHIRLLVEHGADLEARALL
YDGERGWELAKRFGRGEEVEALLRVGGGKEK* back to topmRNA from alignment at scaffold_31:92475..93797+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9619 ID=mRNA_9619|Name=jgi.p|Nanoce1779_2|642298|organism=Nannochloropsis oceanica|type=mRNA|length=1323bp|location=Sequence derived from alignment at scaffold_31:92475..93797+ (Nannochloropsis oceanica)
ATGAGCCTGGCCACCCTCCAAGCCCACGCGCACTTGAATCTCCTATCCAT
TAAGGGCATTGTGTACGACGTCTCGGCTCAGGCACAGGTACATAGGGTCA
AGGTGTCAGGCTGAAGGCGTGTTTATCTGTCATTGACAGTGCAGCGATGT
AAGCAATGATTTCCTCCCTTTTTTTGCTTCTCTCCGACTGTGTTGCTTTT
CGTCTATTGCCATCCTCTTCTTCTTTTCTCCTCTTCCCCATCCGCACTTT
CACCCTCCCGTTTCCCTCTCTCCCTCCTTCCCTCTCACTTCAATCGGCTC
GTCCCAGAAATGGGCACCACTCTGCGGGCACGATATCAGCCGAGTGCTGG
CCAAGGCGCTTGAGGGCGAAGACCTCGACCTCGCCTTGGTCGATCAGGTG
AGCGGATGTTGGGGTGGGGGGTATCCAAGTGACTGCACTCGAGAGAAGAA
GAGGAAGAGGTAATGACAAATAAAGGAATGGATTGGGTTCGGGTCTCTGA
GATGAGGGAGGGGGGTAGCACGGAAGCAAAATGACCAGTCGGTCTGCAAA
GGCAGAGAGCGCGCCTCTACTCCTCGAGCCCAACACGCATTGATTTAAAC
GTACTTTCTCTCTCCTTGTTTTCTTACCACGCCCCCCCCCCCCTCCCTCC
CTCCCTCCCTCCCTTACTTAGGGTCTTGCCGGCCTCTCGTACGATGAAAT
TCTCCATCTAGAAAAGCTGGTGGCTGCCTTCCAACAGGCCTTCCCCGCCG
TGGCCCACCTTCCACCGCACGAGCACCACACCCTCTTTGCCTCGGAGGTG
GGGGAGGGCGGGAGGGCGGGAGGGAAGGAAGGTGAGGAGAACGGGGTGAT
GCTGCACGCATTGATTGAAGAGAAGGGAAGCAACTTGGAGCACATACGGT
GAGAGAGTGATAAGGAGGGAGGGAAGGAGGCAGGGAGGAGGAAAAACAGA
AAGATCTGTGACACGTCTGACCACATGTCCCTCTCCCCCCCCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCAGCCTCCTCCTC
TGTCCCTCTACCATCAACTATCCCTGTCCCCGCACCGGTCTCAGTCCTCT
GCACAAGGCCATCGAGGTCGGGAGGGAGGGAGAGGAGGGAGGGAAGGAGG
GAGGGGCTGCCCCCCTCCTCCCTCTCCTCAGACTCCTCGTGGAGCACGGG
GCGGATCTGGAGGCGAGGGCATTATTGTACGACGGAGAAAGGGGATGGGA
GCTGGCCAAACGGTTTGGGAGGGGGGAGGAGGTGGAAGCACTCCTGCGGG
TTGGAGGGGGGAAGGAGAAGTAG back to topCoding sequence (CDS) from alignment at scaffold_31:92475..93797+ >mRNA_9619 ID=mRNA_9619|Name=jgi.p|Nanoce1779_2|642298|organism=Nannochloropsis oceanica|type=CDS|length=2184bp|location=Sequence derived from alignment at scaffold_31:92475..93797+ (Nannochloropsis oceanica)
ATGAGCCTGGCCACCCTCCAAGCCCACGCGCACTTGAATCTCCTATCCAT
TAAGGGCATTGTGTACGACGTCTCGGCTCAGGCACAGAAATGGGCACCAC
TCTGCGGGCACGATATCAGCCGAGTGCTGGCCAAGGCGCTTGAGGGCGAA
GACCTCGACCTCGCCTTGGTCGATCAGGGTCTTGCCGGCCTCTCGTACGA
TGAAATTCTCCATCTAGAAAAGCTGGTGGCTGCCTTCCAACAGGCCTTCC
CCGCCGTGGCCCACCTTCCACCGCACGAGCACCACACCCTCTTTGCCTCG
GAGGTGGGGGAGGGCGGGAGGGCGGGAGGGAAGGAAGGTGAGGAGAACGG
GGTGATGCTGCACGCATTGATTGAAGAGAAGGGAAGCAACTTGGAGCACA
TACGACTCCTCGTGGAGCACGGGGCGGATCTGGAGGCGAGGGCATTATTG
TACGACGGAGAAAGGGGATGGGAGCTGGCCAAACGGTTTGGGAGGGGGGA
GGAGGTGGAAGCACTCCTGCGGGTTGGAGGGGGGAAGGAGAAGTAGATGA
GCCTGGCCACCCTCCAAGCCCACGCGCACTTGAATCTCCTATCCATTAAG
GGCATTGTGTACGACGTCTCGGCTCAGGCACAGAAATGGGCACCACTCTG
CGGGCACGATATCAGCCGAGTGCTGGCCAAGGCGCTTGAGGGCGAAGACC
TCGACCTCGCCTTGGTCGATCAGGGTCTTGCCGGCCTCTCGTACGATGAA
ATTCTCCATCTAGAAAAGCTGGTGGCTGCCTTCCAACAGGCCTTCCCCGC
CGTGGCCCACCTTCCACCGCACGAGCACCACACCCTCTTTGCCTCGGAGG
TGGGGGAGGGCGGGAGGGCGGGAGGGAAGGAAGGTGAGGAGAACGGGGTG
ATGCTGCACGCATTGATTGAAGAGAAGGGAAGCAACTTGGAGCACATACG
ACTCCTCGTGGAGCACGGGGCGGATCTGGAGGCGAGGGCATTATTGTACG
ACGGAGAAAGGGGATGGGAGCTGGCCAAACGGTTTGGGAGGGGGGAGGAG
GTGGAAGCACTCCTGCGGGTTGGAGGGGGGAAGGAGAAGTAGATGAGCCT
GGCCACCCTCCAAGCCCACGCGCACTTGAATCTCCTATCCATTAAGGGCA
TTGTGTACGACGTCTCGGCTCAGGCACAGAAATGGGCACCACTCTGCGGG
CACGATATCAGCCGAGTGCTGGCCAAGGCGCTTGAGGGCGAAGACCTCGA
CCTCGCCTTGGTCGATCAGGGTCTTGCCGGCCTCTCGTACGATGAAATTC
TCCATCTAGAAAAGCTGGTGGCTGCCTTCCAACAGGCCTTCCCCGCCGTG
GCCCACCTTCCACCGCACGAGCACCACACCCTCTTTGCCTCGGAGGTGGG
GGAGGGCGGGAGGGCGGGAGGGAAGGAAGGTGAGGAGAACGGGGTGATGC
TGCACGCATTGATTGAAGAGAAGGGAAGCAACTTGGAGCACATACGACTC
CTCGTGGAGCACGGGGCGGATCTGGAGGCGAGGGCATTATTGTACGACGG
AGAAAGGGGATGGGAGCTGGCCAAACGGTTTGGGAGGGGGGAGGAGGTGG
AAGCACTCCTGCGGGTTGGAGGGGGGAAGGAGAAGTAGATGAGCCTGGCC
ACCCTCCAAGCCCACGCGCACTTGAATCTCCTATCCATTAAGGGCATTGT
GTACGACGTCTCGGCTCAGGCACAGAAATGGGCACCACTCTGCGGGCACG
ATATCAGCCGAGTGCTGGCCAAGGCGCTTGAGGGCGAAGACCTCGACCTC
GCCTTGGTCGATCAGGGTCTTGCCGGCCTCTCGTACGATGAAATTCTCCA
TCTAGAAAAGCTGGTGGCTGCCTTCCAACAGGCCTTCCCCGCCGTGGCCC
ACCTTCCACCGCACGAGCACCACACCCTCTTTGCCTCGGAGGTGGGGGAG
GGCGGGAGGGCGGGAGGGAAGGAAGGTGAGGAGAACGGGGTGATGCTGCA
CGCATTGATTGAAGAGAAGGGAAGCAACTTGGAGCACATACGACTCCTCG
TGGAGCACGGGGCGGATCTGGAGGCGAGGGCATTATTGTACGACGGAGAA
AGGGGATGGGAGCTGGCCAAACGGTTTGGGAGGGGGGAGGAGGTGGAAGC
ACTCCTGCGGGTTGGAGGGGGGAAGGAGAAGTAG back to top
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