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Properties
| Property Name | Value |
|---|
| TranscriptId | 624158 |
| Track | FilteredModels2 |
| ProteinId | 624072 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_31 | supercontig | scaffold_31:47495..49444 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9605 ID=mRNA_9605|Name=jgi.p|Nanoce1779_2|624072|organism=Nannochloropsis oceanica|type=mRNA|length=1293bp
ATGATCAACCTCCTCTCTACCGCCGCCGCCTTTCTAGGGGCGCTAGTAGC
TGTCGACTGGCTTGGCAATGATGGACAAGTCACCATTCCCACGTTGTACT
GGCTGATGGACCATCCGGGTATGGCTTTGCTGCGGAGTCTTGACCCCGAG
ACAGCGCACGACTGGGCCATTTGGGCTCTGAGCAAGGAGCTGGTGCCAGC
CAACCGCACAGGCCCTTCAGACAGGGATAGTGCCCTGCTGCAGGTGTCGC
TGTGGGATGGATTGTGTGTCTTCCCGAACCCGGTGGGTGTGGCGGCGGGC
TTCGACAAGCATGCGGAGGCAATGAAAGGACTGCTGGGTCTGGGGCTGGG
GTTTGTGGAGATCGGGAGCGTCACGCCTCGGCCGCAAGACGGTAATGCCA
AGCCACGCATGTTTAGGTTGGAGGAGGACCGGGCCGTCATCAACCGTTAT
GGCTTTAATTCGCACGGCCTGGCGGTGGTGGCGAAGCGCCTTCAGGACTT
CTGGGAGGAGCGACTGAGGCGCGAGGAAAAGAATGAGAGGGGAGCCGTAG
CAGGAGCAGCAGGAGGGGTAGTAGGCGTGAATGTCGGCAAGAACAAGACG
ACGGAGAGGGCGGAGGAGGACTATGTGCAGGGTGCTCGGGAGCTTGGTCC
TTATGCCGATTATCTGGTCATTAATGTTTCCAGCCCCAACACGCCGGGTC
TCAGGTCCTTGCAGCGGAAGGGTGCTTTCGAGTCCCTCATTCGGGCAGTG
CAGAAGGAATTGAAGGAGGGTGGGAAGGCGGGGCCTGTCACCAACGTGCA
CGGTCGACGCGTGCCTCTGCTCATCAAGGTCGCGCCTGATCTGTCTGGGG
AGGAAAAAAAAGACATTGCAGCCGTGGCTCTCAAGACAGGTATTGACGGG
CTGGTGGTCTCAAACACCACCGTCTCCCGCCCCCCCTCCCTCCAGTCCCG
ACACGCCACCGAAACAGGGGGGTTGAGCGGGCTGCCTCTTAAGGACTTGG
CCACGCAGACCATCCACGATCTTTACCTACTTACGGGGCGGGGCAAAGTA
CCCATAATAGGTGTGGGTGGAGTCGGCTCGGGCCAGGATGCGTACGATAA
GATACGGGCGGGTGCCTCGTTGGTGCAGGTATACAGCATGTTGGTGTACG
AGGGTCCAGGAGCAGTCAAACGGATCACGCAAGAGCTGGCGGCCTTGCTG
GAACGAGACGAGTACAAGCACGTCAGTGAGGCGTGTGTGGTGGTATACTT
ATTGACAAACAAAGACGTGGAACCAGGAGGGATGGGTCCTTGA back to topprotein sequence of jgi.p|Nanoce1779_2|624072 >mRNA_9605-protein ID=mRNA_9605-protein|Name=jgi.p|Nanoce1779_2|624072|organism=Nannochloropsis oceanica|type=polypeptide|length=431bp
MINLLSTAAAFLGALVAVDWLGNDGQVTIPTLYWLMDHPGMALLRSLDPE
TAHDWAIWALSKELVPANRTGPSDRDSALLQVSLWDGLCVFPNPVGVAAG
FDKHAEAMKGLLGLGLGFVEIGSVTPRPQDGNAKPRMFRLEEDRAVINRY
GFNSHGLAVVAKRLQDFWEERLRREEKNERGAVAGAAGGVVGVNVGKNKT
TERAEEDYVQGARELGPYADYLVINVSSPNTPGLRSLQRKGAFESLIRAV
QKELKEGGKAGPVTNVHGRRVPLLIKVAPDLSGEEKKDIAAVALKTGIDG
LVVSNTTVSRPPSLQSRHATETGGLSGLPLKDLATQTIHDLYLLTGRGKV
PIIGVGGVGSGQDAYDKIRAGASLVQVYSMLVYEGPGAVKRITQELAALL
ERDEYKHVSEACVVVYLLTNKDVEPGGMGP* back to topmRNA from alignment at scaffold_31:47495..49444- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9605 ID=mRNA_9605|Name=jgi.p|Nanoce1779_2|624072|organism=Nannochloropsis oceanica|type=mRNA|length=1950bp|location=Sequence derived from alignment at scaffold_31:47495..49444- (Nannochloropsis oceanica)
ATGATCAACCTCCTCTCTACCGCCGCCGCCTTTCTAGGGGCGCTAGTAGC
TGTCGACTGGCTTGGCAATGATGGACAAGTCACCATTCCCACGTTGTACT
GGCTGATGGACCATCCGGGTATGGCTTTGCTGCGGAGTCTTGACCCCGAG
ACAGCGCACGACTGGGCCATTTGGGCTCTGAGCAAGGAGCTGGTGCCAGC
CAACCGCACAGGCCCTTCAGACAGGGATAGTGCCCTGCTGCAGGTGTCGC
TGTGGGATGGATTGTGTGTCTTCCCGAACCCGGTGGGTGTGGCGGCGGGC
TTCGACAAGCATGCGGAGGCAATGAAAGGACTGCTGGGTCTGGGGCTGGG
GTTTGTGGAGATCGGGAGCGTCACGCCTCGGCCGCAAGACGGTAATGCCA
AGCCACGCATGTTTAGGTTGGAGGAGGACCGGGCCGTCATCAACCGTTAT
GGCTTTAATTCGCACGGCCTGGCGGTGGTGGCGAAGCGCCTTCAGGACTT
CTGGGAGGAGCGACTGAGGCGCGAGGAAAAGAATGAGAGGGGAGCCGTAG
CAGGAGCAGCAGGAGGGGTAGTAGGCGTGAATGTCGGCAAGAACAAGACG
ACGGAGAGGGCGGAGGAGGACTATGTGCAGGGTGCTCGGGAGCTTGGTCC
TTATGCCGATTATCTGGTCATTAATGTTTCCAGCCCCAACACGCCGGGTC
TCAGGTCCTTGCAGCGGAAGGGTGCTTTCGAGTCCCTCATTCGGGCAGTG
CAGAAGGAATTGAAGGAGGGTGGGAAGGCGGGGCCTGTCACCAACGTGCA
CGGTCGACGCGTGCCTCTGCTCATCAAGGTCGCGCCTGATCTGTCTGGGG
AGGAAAAAAAAGACATTGCAGCCGTGGCTCTCAAGACAGGTATTGACGGG
CTGGTGGTCTCAAACACCACCGTCTCCCGCCCCCCCTCCCTCCAGTCCCG
ACACGCCACCGAAACAGGGGGGTTGAGCGGGCTGCCTCTTAAGGACTTGG
CCACGCAGACCATCCACGATCTTTACCTACTTACGGGGCGGGGCAAAGTA
CCCATAATAGGTGTGGGTGGAGTCGGCTCGGGCCAGGATGCGTACGATAA
GATACGGGCGGGTGCCTCGTTGGTGCAGGTGATAGGACGGGAGGGAGGGA
AGGAGGACGAGGAGAAGGGGGGTTTTCAGGCTGGATGAAGCGCTTCCCCA
TGACTTTGTGAGGAATTAGCACTCTGTCCTTTCCTTTCCGCGCACTTTCC
ATTACTGATCACATTTTCATACCTCCTAATCCTTCCTTTTCCTCTTAACT
CCCTCCCTTCCTAGGTATACAGCATGTTGGTGTACGAGGGTCCAGGAGCA
GTCAAACGGATCACGCAAGAGCTGGCGGCCTTGCTGGAACGAGACGAGTA
CAAGCACGTCAGTGAGGCGGTGGGTGCGATTCATCGAGAGATGCAGCAGC
AGCGGCAGCCGCACACGCCCAATATCCTCGCCATTGACGTGGTCGGAGAA
GGGAGGGAGGAGGGAGAGCTGAAGGGGGGGAAGAGAAAGGGGTGGTGGAG
GTGGTTATCACGGGGTTGAGGAGGGAGAGAGGGGGGGAGGGAGGAAGGGA
GAGAGGAAACAAGGAGCATGTACACTAGTAGAGGGAATATGATAAAAGAC
GCACGACATTCACAAGGCTGCTCCTTGGTTTTTCCTCATTTTCATTGTTG
GTTTATGTTGCTAATTTTATGAAGGCATTTTGGCGAGTGCTGATATGCTG
CCATCGCTTTTGCCGTCGGTCCTGCTCAACGCTGCGATAGCCAACCCCAG
CCGATGCTACAATATGCTCCAGCACACAACAAGAATCTACACATGCATGC
ACGAAGTACGGTTTTTAAAATATTGATGCGTGTCACACAGTGTGTGGTGG
TATACTTATTGACAAACAAAGACGTGGAACCAGGAGGGATGGGTCCTTGA
back to topCoding sequence (CDS) from alignment at scaffold_31:47495..49444- >mRNA_9605 ID=mRNA_9605|Name=jgi.p|Nanoce1779_2|624072|organism=Nannochloropsis oceanica|type=CDS|length=3879bp|location=Sequence derived from alignment at scaffold_31:47495..49444- (Nannochloropsis oceanica)
TGTGTGGTGGTATACTTATTGACAAACAAAGACGTGGAACCAGGAGGGAT
GGGTCCTTGAGTATACAGCATGTTGGTGTACGAGGGTCCAGGAGCAGTCA
AACGGATCACGCAAGAGCTGGCGGCCTTGCTGGAACGAGACGAGTACAAG
CACGTCAGTGAGGCGATGATCAACCTCCTCTCTACCGCCGCCGCCTTTCT
AGGGGCGCTAGTAGCTGTCGACTGGCTTGGCAATGATGGACAAGTCACCA
TTCCCACGTTGTACTGGCTGATGGACCATCCGGGTATGGCTTTGCTGCGG
AGTCTTGACCCCGAGACAGCGCACGACTGGGCCATTTGGGCTCTGAGCAA
GGAGCTGGTGCCAGCCAACCGCACAGGCCCTTCAGACAGGGATAGTGCCC
TGCTGCAGGTGTCGCTGTGGGATGGATTGTGTGTCTTCCCGAACCCGGTG
GGTGTGGCGGCGGGCTTCGACAAGCATGCGGAGGCAATGAAAGGACTGCT
GGGTCTGGGGCTGGGGTTTGTGGAGATCGGGAGCGTCACGCCTCGGCCGC
AAGACGGTAATGCCAAGCCACGCATGTTTAGGTTGGAGGAGGACCGGGCC
GTCATCAACCGTTATGGCTTTAATTCGCACGGCCTGGCGGTGGTGGCGAA
GCGCCTTCAGGACTTCTGGGAGGAGCGACTGAGGCGCGAGGAAAAGAATG
AGAGGGGAGCCGTAGCAGGAGCAGCAGGAGGGGTAGTAGGCGTGAATGTC
GGCAAGAACAAGACGACGGAGAGGGCGGAGGAGGACTATGTGCAGGGTGC
TCGGGAGCTTGGTCCTTATGCCGATTATCTGGTCATTAATGTTTCCAGCC
CCAACACGCCGGGTCTCAGGTCCTTGCAGCGGAAGGGTGCTTTCGAGTCC
CTCATTCGGGCAGTGCAGAAGGAATTGAAGGAGGGTGGGAAGGCGGGGCC
TGTCACCAACGTGCACGGTCGACGCGTGCCTCTGCTCATCAAGGTCGCGC
CTGATCTGTCTGGGGAGGAAAAAAAAGACATTGCAGCCGTGGCTCTCAAG
ACAGGTATTGACGGGCTGGTGGTCTCAAACACCACCGTCTCCCGCCCCCC
CTCCCTCCAGTCCCGACACGCCACCGAAACAGGGGGGTTGAGCGGGCTGC
CTCTTAAGGACTTGGCCACGCAGACCATCCACGATCTTTACCTACTTACG
GGGCGGGGCAAAGTACCCATAATAGGTGTGGGTGGAGTCGGCTCGGGCCA
GGATGCGTACGATAAGATACGGGCGGGTGCCTCGTTGGTGCAGTGTGTGG
TGGTATACTTATTGACAAACAAAGACGTGGAACCAGGAGGGATGGGTCCT
TGAGTATACAGCATGTTGGTGTACGAGGGTCCAGGAGCAGTCAAACGGAT
CACGCAAGAGCTGGCGGCCTTGCTGGAACGAGACGAGTACAAGCACGTCA
GTGAGGCGATGATCAACCTCCTCTCTACCGCCGCCGCCTTTCTAGGGGCG
CTAGTAGCTGTCGACTGGCTTGGCAATGATGGACAAGTCACCATTCCCAC
GTTGTACTGGCTGATGGACCATCCGGGTATGGCTTTGCTGCGGAGTCTTG
ACCCCGAGACAGCGCACGACTGGGCCATTTGGGCTCTGAGCAAGGAGCTG
GTGCCAGCCAACCGCACAGGCCCTTCAGACAGGGATAGTGCCCTGCTGCA
GGTGTCGCTGTGGGATGGATTGTGTGTCTTCCCGAACCCGGTGGGTGTGG
CGGCGGGCTTCGACAAGCATGCGGAGGCAATGAAAGGACTGCTGGGTCTG
GGGCTGGGGTTTGTGGAGATCGGGAGCGTCACGCCTCGGCCGCAAGACGG
TAATGCCAAGCCACGCATGTTTAGGTTGGAGGAGGACCGGGCCGTCATCA
ACCGTTATGGCTTTAATTCGCACGGCCTGGCGGTGGTGGCGAAGCGCCTT
CAGGACTTCTGGGAGGAGCGACTGAGGCGCGAGGAAAAGAATGAGAGGGG
AGCCGTAGCAGGAGCAGCAGGAGGGGTAGTAGGCGTGAATGTCGGCAAGA
ACAAGACGACGGAGAGGGCGGAGGAGGACTATGTGCAGGGTGCTCGGGAG
CTTGGTCCTTATGCCGATTATCTGGTCATTAATGTTTCCAGCCCCAACAC
GCCGGGTCTCAGGTCCTTGCAGCGGAAGGGTGCTTTCGAGTCCCTCATTC
GGGCAGTGCAGAAGGAATTGAAGGAGGGTGGGAAGGCGGGGCCTGTCACC
AACGTGCACGGTCGACGCGTGCCTCTGCTCATCAAGGTCGCGCCTGATCT
GTCTGGGGAGGAAAAAAAAGACATTGCAGCCGTGGCTCTCAAGACAGGTA
TTGACGGGCTGGTGGTCTCAAACACCACCGTCTCCCGCCCCCCCTCCCTC
CAGTCCCGACACGCCACCGAAACAGGGGGGTTGAGCGGGCTGCCTCTTAA
GGACTTGGCCACGCAGACCATCCACGATCTTTACCTACTTACGGGGCGGG
GCAAAGTACCCATAATAGGTGTGGGTGGAGTCGGCTCGGGCCAGGATGCG
TACGATAAGATACGGGCGGGTGCCTCGTTGGTGCAGTGTGTGGTGGTATA
CTTATTGACAAACAAAGACGTGGAACCAGGAGGGATGGGTCCTTGAGTAT
ACAGCATGTTGGTGTACGAGGGTCCAGGAGCAGTCAAACGGATCACGCAA
GAGCTGGCGGCCTTGCTGGAACGAGACGAGTACAAGCACGTCAGTGAGGC
GATGATCAACCTCCTCTCTACCGCCGCCGCCTTTCTAGGGGCGCTAGTAG
CTGTCGACTGGCTTGGCAATGATGGACAAGTCACCATTCCCACGTTGTAC
TGGCTGATGGACCATCCGGGTATGGCTTTGCTGCGGAGTCTTGACCCCGA
GACAGCGCACGACTGGGCCATTTGGGCTCTGAGCAAGGAGCTGGTGCCAG
CCAACCGCACAGGCCCTTCAGACAGGGATAGTGCCCTGCTGCAGGTGTCG
CTGTGGGATGGATTGTGTGTCTTCCCGAACCCGGTGGGTGTGGCGGCGGG
CTTCGACAAGCATGCGGAGGCAATGAAAGGACTGCTGGGTCTGGGGCTGG
GGTTTGTGGAGATCGGGAGCGTCACGCCTCGGCCGCAAGACGGTAATGCC
AAGCCACGCATGTTTAGGTTGGAGGAGGACCGGGCCGTCATCAACCGTTA
TGGCTTTAATTCGCACGGCCTGGCGGTGGTGGCGAAGCGCCTTCAGGACT
TCTGGGAGGAGCGACTGAGGCGCGAGGAAAAGAATGAGAGGGGAGCCGTA
GCAGGAGCAGCAGGAGGGGTAGTAGGCGTGAATGTCGGCAAGAACAAGAC
GACGGAGAGGGCGGAGGAGGACTATGTGCAGGGTGCTCGGGAGCTTGGTC
CTTATGCCGATTATCTGGTCATTAATGTTTCCAGCCCCAACACGCCGGGT
CTCAGGTCCTTGCAGCGGAAGGGTGCTTTCGAGTCCCTCATTCGGGCAGT
GCAGAAGGAATTGAAGGAGGGTGGGAAGGCGGGGCCTGTCACCAACGTGC
ACGGTCGACGCGTGCCTCTGCTCATCAAGGTCGCGCCTGATCTGTCTGGG
GAGGAAAAAAAAGACATTGCAGCCGTGGCTCTCAAGACAGGTATTGACGG
GCTGGTGGTCTCAAACACCACCGTCTCCCGCCCCCCCTCCCTCCAGTCCC
GACACGCCACCGAAACAGGGGGGTTGAGCGGGCTGCCTCTTAAGGACTTG
GCCACGCAGACCATCCACGATCTTTACCTACTTACGGGGCGGGGCAAAGT
ACCCATAATAGGTGTGGGTGGAGTCGGCTCGGGCCAGGATGCGTACGATA
AGATACGGGCGGGTGCCTCGTTGGTGCAG back to top
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