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Properties
| Property Name | Value |
|---|
| TranscriptId | 251381 |
| Track | FilteredModels2 |
| ProteinId | 251295 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_31 | supercontig | scaffold_31:13603..15046 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9594 ID=mRNA_9594|Name=jgi.p|Nanoce1779_2|251295|organism=Nannochloropsis oceanica|type=mRNA|length=684bp
GCGTGAGGATGCCTTAAGTGGCATGAATGTCGGGCAGAGGTTTGAGATGG
GTGAGTGACGCAAGGGCGGATAGGAGGAAGGGTTGAGGGTTGATAGTCAA
GTCATAGTTCGGATAGCCTCTCGTTTATAGGGACAGGGAATGAATGCGTC
TTTATTTCTCATCACCTCTCTCCTTACTCCTGCCCTTCCTCTCTCATATC
CCTCTATCTTGCTCGAAAGGCTATGACATCGAGGACGAGACCGTTCCCCT
CGAGCAAGACGACGCCCTCCCCCTCATAGAAACCATTGCCAATGCCGCCG
ACATGCGGAAAGGCGAGGACGTGTACGCTATCCGCGTGTCTTCCTTGACG
ACCGTATCGTCCTTTTTTGTGCTCGTCTCGGGGAACAGCCGGCCGCAGAT
CCAGGCCATAGCCGGCGCCATCGAGGATGACATGATGGAGAAGCACGGGA
TGGAAGCTCGGAACGGCGGGGAGGGCACAGCAGACAGCGGGTGGATCCTG
CTGGACTTCGGGAGCGTGGTAGTGAATGTGATGACGTCCGTGGCGAGGAA
ATACTACGCGCTGGAAAAGCTGTGGAAAAAGGGCGAGGAGGTGGACTTGT
CCCACATACTGAAGCCAAACGCCCTTCCTTAATCGAGGATGCGTTCTGGT
CCTAGAGAGGACGAAATGATGAGATGAGAAAGGA back to topprotein sequence of jgi.p|Nanoce1779_2|251295 >mRNA_9594-protein ID=mRNA_9594-protein|Name=jgi.p|Nanoce1779_2|251295|organism=Nannochloropsis oceanica|type=polypeptide|length=163bp
MRLYFSSPLSLLLPFLSHIPLSCSKGYDIEDETVPLEQDDALPLIETIAN
AADMRKGEDVYAIRVSSLTTVSSFFVLVSGNSRPQIQAIAGAIEDDMMEK
HGMEARNGGEGTADSGWILLDFGSVVVNVMTSVARKYYALEKLWKKGEEV
DLSHILKPNALP* back to topmRNA from alignment at scaffold_31:13603..15046- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9594 ID=mRNA_9594|Name=jgi.p|Nanoce1779_2|251295|organism=Nannochloropsis oceanica|type=mRNA|length=1444bp|location=Sequence derived from alignment at scaffold_31:13603..15046- (Nannochloropsis oceanica)
GCGTGAGGATGCCTTAAGTGGCATGAATGTCGGGCAGAGGTTTGAGATGG
GTGAGTGACGCAAGGGCGGATAGGAGGAAGGGTTGAGGGTTGATAGTCAA
GTCATAGTTCGGATAGCCTCTCGTTTATAGGGACAGGGAATGAATGCGTC
TTTATTTCTCATCACCTCTCTCCTTACTCCTGCCCTTCCTCTCTCATATC
CCTCTATCTTGCTCGAAAGGCTATGACATCGAGGACGAGACCGTTCCCCT
CGAGCAAGACGACGCCCTCCCCCTCATAGAAACCATTGCCAATGCCGCCG
ACATGCGGAAAGGCGAGGACGTGTACGCTATCCGCGTGTCTTCCTTGACG
ACCGTATCGTCCTTTTTTGTGCTCGTCTCGGGGAACAGCCGGCCGCAGAT
CCAGGCCATAGCCGGTACGTCGCGAACGTCATCAATCCTCCTCCTTCATC
ACTACTTCTGCCTCGTCACTACTCCTCTCACCACTGCCTTCTCATCACCC
CTCCTGCCTCATCATTGATCCTCTCTCATCACCACTCCTCCCTAATCACT
ACTCCTCTCACCACACCTCTCTCATCATCACTGCACTTTCATCACCCCTC
CTCCCTCATCACTACTCCTCTCTCATCATCACACCTCTCTCATCACTACT
TTCTCATCACTACTCCTCTCACCACTGCATTCTCGTCACTACTTTCACAT
CATCACTCCTCTCTCGTCACTACTCCTCCTTCATCGCCTCATCCTGCGCT
TGTTTCCTCTTCCTCCTTTGTCAAGGCTTTTGCTTTCTTCGATTCTTTAC
TTGGATCTCCCCGAGATCAGGAGATGACGGTTTGGGGCTTGCTCCCCATA
ACTTTCACTTATGTTCTCTTCCGCCCTCCCTCATTCCCTCCTTCCACTCC
TCCTCTCCCAGGCGCCATCGAGGATGACATGATGGAGAAGCACGGGATGG
AAGCTCGGAACGGCGGGGAGGGCACAGCAGACAGCGGGTGGATCCTGCTG
GACTTCGGGAGCGTGGTAGTGAATGTGATGACGTCCGTGGCGAGGAAATA
CTACGCGCTGGAAAAGCTGTGGAAAAAGGTAGGTGTAGGTGCATGTGTGC
GTGCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTCCCTCCCTTCCTCCCTC
CCTCCTTCCCATTTCAATCCCCGTGGAGATTGGTGGGATGCATACATTGA
CACTTGTCTTATCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCC
TTCCCTCCCGCCCTCCTCCTGCAGGGCGAGGAGGTGGACTTGTCCCACAT
ACTGAAGCCAAACGCGCCTCCGGGGTCTGAGAATGGGATGGAGGAAGGGA
GGGAGGGAGGGAGGGAAGGGCCGTCCTCGGATCCTTCCTTAATCGAGGAT
GCGTTCTGGTCCTAGAGAGGACGAAATGATGAGATGAGAAAGGA back to topCoding sequence (CDS) from alignment at scaffold_31:13603..15046- >mRNA_9594 ID=mRNA_9594|Name=jgi.p|Nanoce1779_2|251295|organism=Nannochloropsis oceanica|type=CDS|length=1956bp|location=Sequence derived from alignment at scaffold_31:13603..15046- (Nannochloropsis oceanica)
CCTTCCTTAAGGCGAGGAGGTGGACTTGTCCCACATACTGAAGCCAAACG
CGCGCCATCGAGGATGACATGATGGAGAAGCACGGGATGGAAGCTCGGAA
CGGCGGGGAGGGCACAGCAGACAGCGGGTGGATCCTGCTGGACTTCGGGA
GCGTGGTAGTGAATGTGATGACGTCCGTGGCGAGGAAATACTACGCGCTG
GAAAAGCTGTGGAAAAAGATGCGTCTTTATTTCTCATCACCTCTCTCCTT
ACTCCTGCCCTTCCTCTCTCATATCCCTCTATCTTGCTCGAAAGGCTATG
ACATCGAGGACGAGACCGTTCCCCTCGAGCAAGACGACGCCCTCCCCCTC
ATAGAAACCATTGCCAATGCCGCCGACATGCGGAAAGGCGAGGACGTGTA
CGCTATCCGCGTGTCTTCCTTGACGACCGTATCGTCCTTTTTTGTGCTCG
TCTCGGGGAACAGCCGGCCGCAGATCCAGGCCATAGCCGCCTTCCTTAAG
GCGAGGAGGTGGACTTGTCCCACATACTGAAGCCAAACGCGCGCCATCGA
GGATGACATGATGGAGAAGCACGGGATGGAAGCTCGGAACGGCGGGGAGG
GCACAGCAGACAGCGGGTGGATCCTGCTGGACTTCGGGAGCGTGGTAGTG
AATGTGATGACGTCCGTGGCGAGGAAATACTACGCGCTGGAAAAGCTGTG
GAAAAAGATGCGTCTTTATTTCTCATCACCTCTCTCCTTACTCCTGCCCT
TCCTCTCTCATATCCCTCTATCTTGCTCGAAAGGCTATGACATCGAGGAC
GAGACCGTTCCCCTCGAGCAAGACGACGCCCTCCCCCTCATAGAAACCAT
TGCCAATGCCGCCGACATGCGGAAAGGCGAGGACGTGTACGCTATCCGCG
TGTCTTCCTTGACGACCGTATCGTCCTTTTTTGTGCTCGTCTCGGGGAAC
AGCCGGCCGCAGATCCAGGCCATAGCCGCCTTCCTTAAGGCGAGGAGGTG
GACTTGTCCCACATACTGAAGCCAAACGCGCGCCATCGAGGATGACATGA
TGGAGAAGCACGGGATGGAAGCTCGGAACGGCGGGGAGGGCACAGCAGAC
AGCGGGTGGATCCTGCTGGACTTCGGGAGCGTGGTAGTGAATGTGATGAC
GTCCGTGGCGAGGAAATACTACGCGCTGGAAAAGCTGTGGAAAAAGATGC
GTCTTTATTTCTCATCACCTCTCTCCTTACTCCTGCCCTTCCTCTCTCAT
ATCCCTCTATCTTGCTCGAAAGGCTATGACATCGAGGACGAGACCGTTCC
CCTCGAGCAAGACGACGCCCTCCCCCTCATAGAAACCATTGCCAATGCCG
CCGACATGCGGAAAGGCGAGGACGTGTACGCTATCCGCGTGTCTTCCTTG
ACGACCGTATCGTCCTTTTTTGTGCTCGTCTCGGGGAACAGCCGGCCGCA
GATCCAGGCCATAGCCGCCTTCCTTAAGGCGAGGAGGTGGACTTGTCCCA
CATACTGAAGCCAAACGCGCGCCATCGAGGATGACATGATGGAGAAGCAC
GGGATGGAAGCTCGGAACGGCGGGGAGGGCACAGCAGACAGCGGGTGGAT
CCTGCTGGACTTCGGGAGCGTGGTAGTGAATGTGATGACGTCCGTGGCGA
GGAAATACTACGCGCTGGAAAAGCTGTGGAAAAAGATGCGTCTTTATTTC
TCATCACCTCTCTCCTTACTCCTGCCCTTCCTCTCTCATATCCCTCTATC
TTGCTCGAAAGGCTATGACATCGAGGACGAGACCGTTCCCCTCGAGCAAG
ACGACGCCCTCCCCCTCATAGAAACCATTGCCAATGCCGCCGACATGCGG
AAAGGCGAGGACGTGTACGCTATCCGCGTGTCTTCCTTGACGACCGTATC
GTCCTTTTTTGTGCTCGTCTCGGGGAACAGCCGGCCGCAGATCCAGGCCA
TAGCCG back to top
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