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Properties
| Property Name | Value |
|---|
| TranscriptId | 313467 |
| Track | FilteredModels2 |
| ProteinId | 313381 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_44 | supercontig | scaffold_44:160748..161605 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9585 ID=mRNA_9585|Name=jgi.p|Nanoce1779_2|313381|organism=Nannochloropsis oceanica|type=mRNA|length=858bp
CCTCCTTCTTCGCTTGTGTCTTACTGCTGCTGCTGCTGCTGCTGCTGCTG
CTACTACTGAATGGTAGTCGCTTGACCCAGGGAAGGGAAGGGGAGGGTAA
CAAAAGAGAGGAGGTATTGGATGTGTAAGAGTGTATGTAATTATTTATCT
GTGCATGAAAGAGAGAGGGGAGAGAGAGACACATACAGAGATGTATTTGG
AAAGCACGCACAACGCCCCTAAAAAGCATGTTCTATTCCGTCCGTTCTCC
TCCCCTCTTCCCCCCTCCCCTTTACCCCCCGGTCCCTTACCCCTGCTGCC
GCCGACGATGCGTAGAGGGTGTGGTTGTGTGTGGATACGGTAGAGAGGCG
AGAGGAGAGTGTGTGGTAGGCTGTGGATTGCGGAAGGAGCATCAGGAGGC
CTGGGAGGAAGGAAGGAAGGGAGGAAGGGAGGGAGGGAGAGAGGGGAAGA
AGGAGTCAAAGGCGAGAGGAGAGTGTATGGTAGCATCAGGAGGCCTGGGA
GGGAGAAAGGGAGGGAGAAGTGCGGAGCAAGCAAACGAGAGAGAAAGGGA
GGAGAGGGAGGGCAGGGCGGAGCATCAACACCATCATTCACCGTCATTAG
AAACACCAGCACCACCTGTCACTCACCGTAGAGAGATTTCAAGAGCGCGG
GCTGGAAGGGCGCGGCAGAGTCGAGGAGCTGGAGGCGGAGGAGGACGAAG
ACGGGAGATTCGAGGAGTTGGACGAGCTTGTCGATTTGCATGAGGAAGCT
CACCTGCGAGGGAGGGAGGGAGGGGGGAAAGGTGGTGTGAGGAGTTGCAG
GAGCTTGTCGATCTGCACGAGGAAGGTGACCTCCGAGGAAGGGAAGGAGA
GAGAGAGG back to topprotein sequence of jgi.p|Nanoce1779_2|313381 >mRNA_9585-protein ID=mRNA_9585-protein|Name=jgi.p|Nanoce1779_2|313381|organism=Nannochloropsis oceanica|type=polypeptide|length=172bp
MFYSVRSPPLFPPPLYPPVPYPCCRRRCVEGVVVCGYGREARGECVVGCG
LRKEHQEAWEEGRKGGREGGREGKKESKARGECMVASGGLGGRKGGRSAE
QANEREREEREGRAEHQHHHSPSLETPAPPVTHRREISRARAGRARQSRG
AGGGGGRRREIRGVGRACRFA* back to topmRNA from alignment at scaffold_44:160748..161605+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9585 ID=mRNA_9585|Name=jgi.p|Nanoce1779_2|313381|organism=Nannochloropsis oceanica|type=mRNA|length=858bp|location=Sequence derived from alignment at scaffold_44:160748..161605+ (Nannochloropsis oceanica)
CCTCCTTCTTCGCTTGTGTCTTACTGCTGCTGCTGCTGCTGCTGCTGCTG
CTACTACTGAATGGTAGTCGCTTGACCCAGGGAAGGGAAGGGGAGGGTAA
CAAAAGAGAGGAGGTATTGGATGTGTAAGAGTGTATGTAATTATTTATCT
GTGCATGAAAGAGAGAGGGGAGAGAGAGACACATACAGAGATGTATTTGG
AAAGCACGCACAACGCCCCTAAAAAGCATGTTCTATTCCGTCCGTTCTCC
TCCCCTCTTCCCCCCTCCCCTTTACCCCCCGGTCCCTTACCCCTGCTGCC
GCCGACGATGCGTAGAGGGTGTGGTTGTGTGTGGATACGGTAGAGAGGCG
AGAGGAGAGTGTGTGGTAGGCTGTGGATTGCGGAAGGAGCATCAGGAGGC
CTGGGAGGAAGGAAGGAAGGGAGGAAGGGAGGGAGGGAGAGAGGGGAAGA
AGGAGTCAAAGGCGAGAGGAGAGTGTATGGTAGCATCAGGAGGCCTGGGA
GGGAGAAAGGGAGGGAGAAGTGCGGAGCAAGCAAACGAGAGAGAAAGGGA
GGAGAGGGAGGGCAGGGCGGAGCATCAACACCATCATTCACCGTCATTAG
AAACACCAGCACCACCTGTCACTCACCGTAGAGAGATTTCAAGAGCGCGG
GCTGGAAGGGCGCGGCAGAGTCGAGGAGCTGGAGGCGGAGGAGGACGAAG
ACGGGAGATTCGAGGAGTTGGACGAGCTTGTCGATTTGCATGAGGAAGCT
CACCTGCGAGGGAGGGAGGGAGGGGGGAAAGGTGGTGTGAGGAGTTGCAG
GAGCTTGTCGATCTGCACGAGGAAGGTGACCTCCGAGGAAGGGAAGGAGA
GAGAGAGG back to topCoding sequence (CDS) from alignment at scaffold_44:160748..161605+ >mRNA_9585 ID=mRNA_9585|Name=jgi.p|Nanoce1779_2|313381|organism=Nannochloropsis oceanica|type=CDS|length=516bp|location=Sequence derived from alignment at scaffold_44:160748..161605+ (Nannochloropsis oceanica)
ATGTTCTATTCCGTCCGTTCTCCTCCCCTCTTCCCCCCTCCCCTTTACCC
CCCGGTCCCTTACCCCTGCTGCCGCCGACGATGCGTAGAGGGTGTGGTTG
TGTGTGGATACGGTAGAGAGGCGAGAGGAGAGTGTGTGGTAGGCTGTGGA
TTGCGGAAGGAGCATCAGGAGGCCTGGGAGGAAGGAAGGAAGGGAGGAAG
GGAGGGAGGGAGAGAGGGGAAGAAGGAGTCAAAGGCGAGAGGAGAGTGTA
TGGTAGCATCAGGAGGCCTGGGAGGGAGAAAGGGAGGGAGAAGTGCGGAG
CAAGCAAACGAGAGAGAAAGGGAGGAGAGGGAGGGCAGGGCGGAGCATCA
ACACCATCATTCACCGTCATTAGAAACACCAGCACCACCTGTCACTCACC
GTAGAGAGATTTCAAGAGCGCGGGCTGGAAGGGCGCGGCAGAGTCGAGGA
GCTGGAGGCGGAGGAGGACGAAGACGGGAGATTCGAGGAGTTGGACGAGC
TTGTCGATTTGCATGA back to top
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