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Properties
Property Name | Value |
TranscriptId | 674554 |
Track | FilteredModels2 |
ProteinId | 674468 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_44 | supercontig | scaffold_44:125244..128686 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9571 ID=mRNA_9571|Name=jgi.p|Nanoce1779_2|674468|organism=Nannochloropsis oceanica|type=mRNA|length=3443bp CAACAGGCCACCATCAACAAAATAATAAATCCATCGGGTTCAACGTCAAA ACCTCCCCCCTCCTGTGTGTTCCTGGACCTCACAGCTCTGTCCCCCTCGT CTATTACCCGCCGCCTCCTCCTCCCTTTGCATGAACCGGACCTTGATTTC GTACCAACGCTTTCACCCATCGATCCGTGGACCTCTCCTCTTGCGGCAGT GCTGTTGCTTCCTTCTCCTAGCCTCGGCTTCCTCCTCCTCCTCCTCATCC TCCTCCTCCTCTCTCCCTGCCAGAACCCCCCTTGTTCCTAGCATGGGCAA CCCGATCGCCTTCACCCCTTCTCGAACCACCATGATGACGTCCATCCCTC CTGTCCCTCCCCTCTCCCGCCGTCTCTGGCAAGCCTCCCTCCCTATGGCC CACGCTGTCCTTCACCACCCCTTTGTCCGCTCCATCGGGCAGGGCACCCT TCCCCTCCCTCTCTTCCAAGCCTACGCCGCGCAAGACGCTCATTTTTTAC AGAGCTTTGCAAAAGCTTACGCACATGCCATGACAAAAGCAGAGGACCCA AAGACAGTGGTGGCGCTGAGCGGAATGATTGCTGCGGTTGTGGAAGAATT AGAGCTTCACTCCTCTGTATTAGAGAAGGAGGGAGGGGTGCAGGGTGAAA GCTGCAAGGGAGGAGGAAACGGTTGTGCTACCAGCAGTAATAGCTATAGG GACACTAGGGAAAATGCTGCGAATGGTAACGACGTGGCAGAAGAAAGTCG ACAAGAAACCTCCTCCACCACCACCACCACCATCCCCCCTCTCATCCCCT CCCCCGCTTGTCTCGCCTACACCTCCTTCCTCATCTCCAAGGCATCTTCT CCCTCCAGCTCCATCGCTCACATTTTGGCGGCATTGACCCCGTGTATGCG GCTGTATGCCCATGTAGGGAGGAGGTTGGTCGAGGTAGTGGAGGAGGGGA TGGCGGAAGGGAGGGAACGGGGGGCTGGAGAATCCCTATCCATACCTACA ATACCAAATGTAGGAGAGGTGCCTGCGTCGTCCTCCTCGTCTTCCTTCCC TCCCTCCCTCCGTGCTTGGCTGGATGTGTATTCTAGCCCTGCCTTCGAAG CCAGCGCCGCCGCCGTAGAGGCCTTGTTGGACACCGAAGCCGCCAGAGAG AGGGAAGAGAGGAGGAGGAGAAGGGAGGAGGAGGGAGGGATGGAGGGATG GCAAGAGGACGAGGAGAGGAGGGAGGAAGAGAAGTTGTTCTCCCTGTACC TTAAAGCGATGAATCTCGAGTACAATTTCTTCGCGGAGCAATGGGAGAGA GGAAGGGAGGATTGGAAGGGGTATCAGCCCATCCTCCTCGTCACAGATTT TGACTCCACCTGCTCCCTTTCCGACACCACCCACCTCCTGCCTAAGGCCG CGGGGTATTTCAAGGGGCCGGAGTATTCTCTTTCCAAATGGGAGGAGCTT GAAAATGCATACCTCGCCCAGCTGGCCCAGGTCATGCGCCCCCTCCTCGA AGGCAGCCCCCTCTCCTTCCCGCCTCCCTCCTCGTCCTCCTCTTTCACAG AGGGGCAAGGTCAAGACGCTGCTGCCCCTGTAGAAGCAACCTCTTTCTTC CCCCCTTCTTCATTCTCTCTCATGAAGGAGAGGGATCTAGCCGCAGCTGC TGCTCACCTATCTCCCCTCGACGCCTTTGACGTCCGCGCCGTTGAATCAG TCTCTGCCTCCAACCTCCTCAAGGGCATCGACCTCTCCCTCCTTCCCGGC CTCCTCCTCTCTTCCACCCCTTTATCCACCTCCTCCTCCTTTGTGTCCTC CCTCGCCCTCCAACCACACTGTGCTCCGGTCCTTCGTTACGCTGATGCCC TTGTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCT TCTTCTTCTTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCCTCCTCCTC CTCCTCCTCCTCTTCTTCTTCCTCCTGCCTCCCAAACCCCTCCTCCCCCT TTTTCTTCCACGTTCTCTCTGTATCATGGTCGTCCCTCCTCATCACCACC GCCACTGGGCTTGACCCCTCTCGAGTCACCTGCAATCAGCTCGAGAGCGA GGGTGGGAGGGAGGGAGGGAAGGAGGACGGGGTCCGCTCTATTGCCTCCC CGGACGAGGGAGGGAGGGAGGGCGATAGCAAAGGGGGTGAGTCCTCGACA GGAAAGATCAAAGTACTTGTGGATGGCCCTGGTGGAAAGCTTCGCCACTT CCGACGGCTTCAGGCCAAGGCAGCGAGGGAGGGAGGAAGGGAGGGCAAGA CTGTATATATCGGTGATTCTGTGACAGATATCTTGGCTTTAATGGCCGCT GATGTGGGGATAGTAGTAGGACACTCGGAGACTTTAAGAAAGATGGTAAA AAAAATTGGGTGGGAAATACGGCCGTTGCTGGCCTTTCCCGTGGAGGAGG GCAGGAGGGAGGGAAGAAGGGCGGTGTGGGCGGCGAGGGATTGGGCAGAG ATTGGGGTGTTTTTATTTGGGAGGAGAGGGGCGGAAGTGGTAGGGGAGGG AGAGAAAGAGGGAGGGGGGGAGGTGTAGGCTTGTTAATTACGAAAGAGAT CGGTAACTGGTATCAAAACTGACCAACAAGGGCTTGACCCCGAAGAAAAC TGAAGAGAAAGCAATGAAGATGTATTTAAGGAAAGTCATGAACGTGGTTC CTAGAGTCGGTTGTGACTGACTGCTACCATTATTATTGGGACCGGTTTGT GCGTGTTTGTCCGTGTACCCTGCCCTTCTTCACCCACTGCATGTTGCATT GGCGGCCATTGGCGCAGAACAACGAATATTGAATGCACCATCAACGACAT CACTTCAATGCGATTAGCCTCCGTAGGCACGTCAACACAAGTGATCTGCC CCATTCCTTCAACTGTCCATGCCCCTTGCACGCTGTCATTCTGGCATGCA CTATTTTCCTCAAGGCAGCCATGCATAGATGCATCCCCATGCATAGATGC ATCCCCTCTCCTTAGAGACCTTCCACCCAACCGCCATGATAGGGGCTGAT ATCCCACCACCAACCTTACCATCGAACCACACCTCACTTTTCCCCGGCAG TCATGCCTAAGGTCACCGCTGCGAGTCAACGGCGGGCTCGCGCCCGGGCA TCGAGTCAGCCTTACACCAAGCAACCTCCTGTCCCCGCTGCCATTACCGT CCTTCCCGACCCCAACCGCCCTGATTTGGCCGGGACTGGCTTGCAAAAGC CCGCGCACCGACAAAAACTCATGCGTAAAAAAGCATTTTTAGAGAGTATT GGAGAATCAGCGGCGGCTGCGGCGGTAGACGTGGGGGCTCGGAGTCAAAA AGCAGCTTGCAAGGGGAGCAAGCACGGGGAGGAAAGTTTGACACCGAGCT GGAGCGATGTGCGCGGCCTGCTGGTCTCGCTAAAGTCCCCGTC back to topprotein sequence of jgi.p|Nanoce1779_2|674468 >mRNA_9571-protein ID=mRNA_9571-protein|Name=jgi.p|Nanoce1779_2|674468|organism=Nannochloropsis oceanica|type=polypeptide|length=816bp MNRTLISYQRFHPSIRGPLLLRQCCCFLLLASASSSSSSSSSSSLPARTP LVPSMGNPIAFTPSRTTMMTSIPPVPPLSRRLWQASLPMAHAVLHHPFVR SIGQGTLPLPLFQAYAAQDAHFLQSFAKAYAHAMTKAEDPKTVVALSGMI AAVVEELELHSSVLEKEGGVQGESCKGGGNGCATSSNSYRDTRENAANGN DVAEESRQETSSTTTTTIPPLIPSPACLAYTSFLISKASSPSSSIAHILA ALTPCMRLYAHVGRRLVEVVEEGMAEGRERGAGESLSIPTIPNVGEVPAS SSSSSFPPSLRAWLDVYSSPAFEASAAAVEALLDTEAAREREERRRRREE EGGMEGWQEDEERREEEKLFSLYLKAMNLEYNFFAEQWERGREDWKGYQP ILLVTDFDSTCSLSDTTHLLPKAAGYFKGPEYSLSKWEELENAYLAQLAQ VMRPLLEGSPLSFPPPSSSSSFTEGQGQDAAAPVEATSFFPPSSFSLMKE RDLAAAAAHLSPLDAFDVRAVESVSASNLLKGIDLSLLPGLLLSSTPLST SSSFVSSLALQPHCAPVLRYADALVSSSSSSSSSSSSSSSSSSSSSSSSS SSSSSSSSSSSSSSSCLPNPSSPFFFHVLSVSWSSLLITTATGLDPSRVT CNQLESEGGREGGKEDGVRSIASPDEGGREGDSKGGESSTGKIKVLVDGP GGKLRHFRRLQAKAAREGGREGKTVYIGDSVTDILALMAADVGIVVGHSE TLRKMVKKIGWEIRPLLAFPVEEGRREGRRAVWAARDWAEIGVFLFGRRG AEVVGEGEKEGGGEV* back to topmRNA from alignment at scaffold_44:125244..128686+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9571 ID=mRNA_9571|Name=jgi.p|Nanoce1779_2|674468|organism=Nannochloropsis oceanica|type=mRNA|length=3443bp|location=Sequence derived from alignment at scaffold_44:125244..128686+ (Nannochloropsis oceanica) CAACAGGCCACCATCAACAAAATAATAAATCCATCGGGTTCAACGTCAAA
ACCTCCCCCCTCCTGTGTGTTCCTGGACCTCACAGCTCTGTCCCCCTCGT
CTATTACCCGCCGCCTCCTCCTCCCTTTGCATGAACCGGACCTTGATTTC
GTACCAACGCTTTCACCCATCGATCCGTGGACCTCTCCTCTTGCGGCAGT
GCTGTTGCTTCCTTCTCCTAGCCTCGGCTTCCTCCTCCTCCTCCTCATCC
TCCTCCTCCTCTCTCCCTGCCAGAACCCCCCTTGTTCCTAGCATGGGCAA
CCCGATCGCCTTCACCCCTTCTCGAACCACCATGATGACGTCCATCCCTC
CTGTCCCTCCCCTCTCCCGCCGTCTCTGGCAAGCCTCCCTCCCTATGGCC
CACGCTGTCCTTCACCACCCCTTTGTCCGCTCCATCGGGCAGGGCACCCT
TCCCCTCCCTCTCTTCCAAGCCTACGCCGCGCAAGACGCTCATTTTTTAC
AGAGCTTTGCAAAAGCTTACGCACATGCCATGACAAAAGCAGAGGACCCA
AAGACAGTGGTGGCGCTGAGCGGAATGATTGCTGCGGTTGTGGAAGAATT
AGAGCTTCACTCCTCTGTATTAGAGAAGGAGGGAGGGGTGCAGGGTGAAA
GCTGCAAGGGAGGAGGAAACGGTTGTGCTACCAGCAGTAATAGCTATAGG
GACACTAGGGAAAATGCTGCGAATGGTAACGACGTGGCAGAAGAAAGTCG
ACAAGAAACCTCCTCCACCACCACCACCACCATCCCCCCTCTCATCCCCT
CCCCCGCTTGTCTCGCCTACACCTCCTTCCTCATCTCCAAGGCATCTTCT
CCCTCCAGCTCCATCGCTCACATTTTGGCGGCATTGACCCCGTGTATGCG
GCTGTATGCCCATGTAGGGAGGAGGTTGGTCGAGGTAGTGGAGGAGGGGA
TGGCGGAAGGGAGGGAACGGGGGGCTGGAGAATCCCTATCCATACCTACA
ATACCAAATGTAGGAGAGGTGCCTGCGTCGTCCTCCTCGTCTTCCTTCCC
TCCCTCCCTCCGTGCTTGGCTGGATGTGTATTCTAGCCCTGCCTTCGAAG
CCAGCGCCGCCGCCGTAGAGGCCTTGTTGGACACCGAAGCCGCCAGAGAG
AGGGAAGAGAGGAGGAGGAGAAGGGAGGAGGAGGGAGGGATGGAGGGATG
GCAAGAGGACGAGGAGAGGAGGGAGGAAGAGAAGTTGTTCTCCCTGTACC
TTAAAGCGATGAATCTCGAGTACAATTTCTTCGCGGAGCAATGGGAGAGA
GGAAGGGAGGATTGGAAGGGGTATCAGCCCATCCTCCTCGTCACAGATTT
TGACTCCACCTGCTCCCTTTCCGACACCACCCACCTCCTGCCTAAGGCCG
CGGGGTATTTCAAGGGGCCGGAGTATTCTCTTTCCAAATGGGAGGAGCTT
GAAAATGCATACCTCGCCCAGCTGGCCCAGGTCATGCGCCCCCTCCTCGA
AGGCAGCCCCCTCTCCTTCCCGCCTCCCTCCTCGTCCTCCTCTTTCACAG
AGGGGCAAGGTCAAGACGCTGCTGCCCCTGTAGAAGCAACCTCTTTCTTC
CCCCCTTCTTCATTCTCTCTCATGAAGGAGAGGGATCTAGCCGCAGCTGC
TGCTCACCTATCTCCCCTCGACGCCTTTGACGTCCGCGCCGTTGAATCAG
TCTCTGCCTCCAACCTCCTCAAGGGCATCGACCTCTCCCTCCTTCCCGGC
CTCCTCCTCTCTTCCACCCCTTTATCCACCTCCTCCTCCTTTGTGTCCTC
CCTCGCCCTCCAACCACACTGTGCTCCGGTCCTTCGTTACGCTGATGCCC
TTGTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCT
TCTTCTTCTTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCTTCTTCTTCCTCCTGCCTCCCAAACCCCTCCTCCCCCT
TTTTCTTCCACGTTCTCTCTGTATCATGGTCGTCCCTCCTCATCACCACC
GCCACTGGGCTTGACCCCTCTCGAGTCACCTGCAATCAGCTCGAGAGCGA
GGGTGGGAGGGAGGGAGGGAAGGAGGACGGGGTCCGCTCTATTGCCTCCC
CGGACGAGGGAGGGAGGGAGGGCGATAGCAAAGGGGGTGAGTCCTCGACA
GGAAAGATCAAAGTACTTGTGGATGGCCCTGGTGGAAAGCTTCGCCACTT
CCGACGGCTTCAGGCCAAGGCAGCGAGGGAGGGAGGAAGGGAGGGCAAGA
CTGTATATATCGGTGATTCTGTGACAGATATCTTGGCTTTAATGGCCGCT
GATGTGGGGATAGTAGTAGGACACTCGGAGACTTTAAGAAAGATGGTAAA
AAAAATTGGGTGGGAAATACGGCCGTTGCTGGCCTTTCCCGTGGAGGAGG
GCAGGAGGGAGGGAAGAAGGGCGGTGTGGGCGGCGAGGGATTGGGCAGAG
ATTGGGGTGTTTTTATTTGGGAGGAGAGGGGCGGAAGTGGTAGGGGAGGG
AGAGAAAGAGGGAGGGGGGGAGGTGTAGGCTTGTTAATTACGAAAGAGAT
CGGTAACTGGTATCAAAACTGACCAACAAGGGCTTGACCCCGAAGAAAAC
TGAAGAGAAAGCAATGAAGATGTATTTAAGGAAAGTCATGAACGTGGTTC
CTAGAGTCGGTTGTGACTGACTGCTACCATTATTATTGGGACCGGTTTGT
GCGTGTTTGTCCGTGTACCCTGCCCTTCTTCACCCACTGCATGTTGCATT
GGCGGCCATTGGCGCAGAACAACGAATATTGAATGCACCATCAACGACAT
CACTTCAATGCGATTAGCCTCCGTAGGCACGTCAACACAAGTGATCTGCC
CCATTCCTTCAACTGTCCATGCCCCTTGCACGCTGTCATTCTGGCATGCA
CTATTTTCCTCAAGGCAGCCATGCATAGATGCATCCCCATGCATAGATGC
ATCCCCTCTCCTTAGAGACCTTCCACCCAACCGCCATGATAGGGGCTGAT
ATCCCACCACCAACCTTACCATCGAACCACACCTCACTTTTCCCCGGCAG
TCATGCCTAAGGTCACCGCTGCGAGTCAACGGCGGGCTCGCGCCCGGGCA
TCGAGTCAGCCTTACACCAAGCAACCTCCTGTCCCCGCTGCCATTACCGT
CCTTCCCGACCCCAACCGCCCTGATTTGGCCGGGACTGGCTTGCAAAAGC
CCGCGCACCGACAAAAACTCATGCGTAAAAAAGCATTTTTAGAGAGTATT
GGAGAATCAGCGGCGGCTGCGGCGGTAGACGTGGGGGCTCGGAGTCAAAA
AGCAGCTTGCAAGGGGAGCAAGCACGGGGAGGAAAGTTTGACACCGAGCT
GGAGCGATGTGCGCGGCCTGCTGGTCTCGCTAAAGTCCCCGTC back to topCoding sequence (CDS) from alignment at scaffold_44:125244..128686+ >mRNA_9571 ID=mRNA_9571|Name=jgi.p|Nanoce1779_2|674468|organism=Nannochloropsis oceanica|type=CDS|length=2448bp|location=Sequence derived from alignment at scaffold_44:125244..128686+ (Nannochloropsis oceanica) ATGAACCGGACCTTGATTTCGTACCAACGCTTTCACCCATCGATCCGTGG ACCTCTCCTCTTGCGGCAGTGCTGTTGCTTCCTTCTCCTAGCCTCGGCTT CCTCCTCCTCCTCCTCATCCTCCTCCTCCTCTCTCCCTGCCAGAACCCCC CTTGTTCCTAGCATGGGCAACCCGATCGCCTTCACCCCTTCTCGAACCAC CATGATGACGTCCATCCCTCCTGTCCCTCCCCTCTCCCGCCGTCTCTGGC AAGCCTCCCTCCCTATGGCCCACGCTGTCCTTCACCACCCCTTTGTCCGC TCCATCGGGCAGGGCACCCTTCCCCTCCCTCTCTTCCAAGCCTACGCCGC GCAAGACGCTCATTTTTTACAGAGCTTTGCAAAAGCTTACGCACATGCCA TGACAAAAGCAGAGGACCCAAAGACAGTGGTGGCGCTGAGCGGAATGATT GCTGCGGTTGTGGAAGAATTAGAGCTTCACTCCTCTGTATTAGAGAAGGA GGGAGGGGTGCAGGGTGAAAGCTGCAAGGGAGGAGGAAACGGTTGTGCTA CCAGCAGTAATAGCTATAGGGACACTAGGGAAAATGCTGCGAATGGTAAC GACGTGGCAGAAGAAAGTCGACAAGAAACCTCCTCCACCACCACCACCAC CATCCCCCCTCTCATCCCCTCCCCCGCTTGTCTCGCCTACACCTCCTTCC TCATCTCCAAGGCATCTTCTCCCTCCAGCTCCATCGCTCACATTTTGGCG GCATTGACCCCGTGTATGCGGCTGTATGCCCATGTAGGGAGGAGGTTGGT CGAGGTAGTGGAGGAGGGGATGGCGGAAGGGAGGGAACGGGGGGCTGGAG AATCCCTATCCATACCTACAATACCAAATGTAGGAGAGGTGCCTGCGTCG TCCTCCTCGTCTTCCTTCCCTCCCTCCCTCCGTGCTTGGCTGGATGTGTA TTCTAGCCCTGCCTTCGAAGCCAGCGCCGCCGCCGTAGAGGCCTTGTTGG ACACCGAAGCCGCCAGAGAGAGGGAAGAGAGGAGGAGGAGAAGGGAGGAG GAGGGAGGGATGGAGGGATGGCAAGAGGACGAGGAGAGGAGGGAGGAAGA GAAGTTGTTCTCCCTGTACCTTAAAGCGATGAATCTCGAGTACAATTTCT TCGCGGAGCAATGGGAGAGAGGAAGGGAGGATTGGAAGGGGTATCAGCCC ATCCTCCTCGTCACAGATTTTGACTCCACCTGCTCCCTTTCCGACACCAC CCACCTCCTGCCTAAGGCCGCGGGGTATTTCAAGGGGCCGGAGTATTCTC TTTCCAAATGGGAGGAGCTTGAAAATGCATACCTCGCCCAGCTGGCCCAG GTCATGCGCCCCCTCCTCGAAGGCAGCCCCCTCTCCTTCCCGCCTCCCTC CTCGTCCTCCTCTTTCACAGAGGGGCAAGGTCAAGACGCTGCTGCCCCTG TAGAAGCAACCTCTTTCTTCCCCCCTTCTTCATTCTCTCTCATGAAGGAG AGGGATCTAGCCGCAGCTGCTGCTCACCTATCTCCCCTCGACGCCTTTGA CGTCCGCGCCGTTGAATCAGTCTCTGCCTCCAACCTCCTCAAGGGCATCG ACCTCTCCCTCCTTCCCGGCCTCCTCCTCTCTTCCACCCCTTTATCCACC TCCTCCTCCTTTGTGTCCTCCCTCGCCCTCCAACCACACTGTGCTCCGGT CCTTCGTTACGCTGATGCCCTTGTCTCCTCCTCCTCCTCCTCCTCCTCCT CCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCTCCTCTTCCTCC TCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCCTCCTGCCT CCCAAACCCCTCCTCCCCCTTTTTCTTCCACGTTCTCTCTGTATCATGGT CGTCCCTCCTCATCACCACCGCCACTGGGCTTGACCCCTCTCGAGTCACC TGCAATCAGCTCGAGAGCGAGGGTGGGAGGGAGGGAGGGAAGGAGGACGG GGTCCGCTCTATTGCCTCCCCGGACGAGGGAGGGAGGGAGGGCGATAGCA AAGGGGGTGAGTCCTCGACAGGAAAGATCAAAGTACTTGTGGATGGCCCT GGTGGAAAGCTTCGCCACTTCCGACGGCTTCAGGCCAAGGCAGCGAGGGA GGGAGGAAGGGAGGGCAAGACTGTATATATCGGTGATTCTGTGACAGATA TCTTGGCTTTAATGGCCGCTGATGTGGGGATAGTAGTAGGACACTCGGAG ACTTTAAGAAAGATGGTAAAAAAAATTGGGTGGGAAATACGGCCGTTGCT GGCCTTTCCCGTGGAGGAGGGCAGGAGGGAGGGAAGAAGGGCGGTGTGGG CGGCGAGGGATTGGGCAGAGATTGGGGTGTTTTTATTTGGGAGGAGAGGG GCGGAAGTGGTAGGGGAGGGAGAGAAAGAGGGAGGGGGGGAGGTGTAG back to top
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