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Properties
| Property Name | Value |
|---|
| TranscriptId | 609201 |
| Track | FilteredModels2 |
| ProteinId | 609115 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_44 | supercontig | scaffold_44:60752..62049 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9545 ID=mRNA_9545|Name=jgi.p|Nanoce1779_2|609115|organism=Nannochloropsis oceanica|type=mRNA|length=973bp
ACAGGCACGGCACTACAGAACAACCTCCTCCACCACCGCAAAAATGAAGA
CATCGTGTTTGGCGCTGCTACTGCTGCTCGTGGCGGTGGCTGTGAGCAAG
CAAGTGGCATCTTTTGTTCTCCCTTCTTCTGCCCCCTCCTTTGCCGCCTC
GTCAGCCATCGTAGCCCCTCGCGGGCCGGTCTCATCCTCCACTTTGGTAG
CCCCGCTGAACGTGGTCATAACCCCTGATGGTTCTCCGTCCATGCAAGAG
TATCGTAAGAAGGTACTGCAGGACTTGGTTGAGCGGAAGAACAACGGGGA
GCTGGATGGGTACCAGCTTTTCGACATGATAGTGGCCAAGTGGGGGGTTC
CTTATGGGGTGGAGCTTCGGCGGTTAGACTTTGCGGGAAAGAAGCTTCTG
TACATAAACGTTATGTGGAAATACTTGGGACAGTCTTCTTTTCCCTTATC
GGAGCGACAGTATTTAGAGCATTTGGAGTACATTGCCCGCAAACTAGTGC
AGTGGGGAAAGGTGGCGGAATTCAAAAAGGACCTCGCCGACTGCCGGAAG
AAGCCCAACGCTTATTTCGGGTACGCCGTCTCATTTAATATCGCGGTGTC
GGAGGAGGCGATTGAGCAGTTTGTGGAAGATGCGCGCATTTCCAAGGAGG
AGGACGAGTAAGGATACGAAGCAGCGGGACCCAACAAAACTGGAATACAG
ACAGGCACCCATAGAACGTGCGCACGTAGTAGCCTTTTCCACCGTCATTA
TGTTGTAGATAGAAATGTGTGGCTGGTGGATCAAAAGGGAAAGAGAAGTT
TTGCAGTCGCCGTCAGAGGAAAGATGCGGCGATGGTGAATGGACAAGCGA
AGGAAGACGGAAAGGAGACAGAGAGAGCGTTAGACTTTCCATGAGTTATT
GGAGAAGGGGAGGTTCCACAGTTGTAAAAGTAATCTAAAGAGAAGTAAAG
AAGCAAGAAGGGTTGTGATGTCA back to topprotein sequence of jgi.p|Nanoce1779_2|609115 >mRNA_9545-protein ID=mRNA_9545-protein|Name=jgi.p|Nanoce1779_2|609115|organism=Nannochloropsis oceanica|type=polypeptide|length=206bp
MKTSCLALLLLLVAVAVSKQVASFVLPSSAPSFAASSAIVAPRGPVSSST
LVAPLNVVITPDGSPSMQEYRKKVLQDLVERKNNGELDGYQLFDMIVAKW
GVPYGVELRRLDFAGKKLLYINVMWKYLGQSSFPLSERQYLEHLEYIARK
LVQWGKVAEFKKDLADCRKKPNAYFGYAVSFNIAVSEEAIEQFVEDARIS
KEEDE* back to topmRNA from alignment at scaffold_44:60752..62049- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9545 ID=mRNA_9545|Name=jgi.p|Nanoce1779_2|609115|organism=Nannochloropsis oceanica|type=mRNA|length=1298bp|location=Sequence derived from alignment at scaffold_44:60752..62049- (Nannochloropsis oceanica)
ACAGGCACGGCACTACAGAACAACCTCCTCCACCACCGCAAAAATGAAGA
CATCGTGTTTGGCGCTGCTACTGCTGCTCGTGGCGGTGGCTGTGAGCAAG
CAAGTGGCATCTTTTGTTCTCCCTTCTTCTGCCCCCTCCTTTGCCGCCTC
GTCAGCCATCGTAGCCCCTCGCGGGCCGGTCTCATCCTCCACTTTGGTAG
CCCCGCTGAACGTGGTCATAACCCCTGATGGTTCTCCGTCCATGCAAGAG
TATCGTAAGAAGGTACTGCAGGACTTGGTTGAGCGGAAGAACAACGGGGA
GCTGGATGGGTACCAGCTTTTCGACATGATAGTGGCCAAGTGGGGGGTTC
CTTATGGGGTGGAGCTTCGGCGGTTAGACTTTGCGGGAAAGAAGCTTCTG
TACATAAACGTTATGTGGAAATACTTGGGACAGTCTTCTTTTCCCTTATC
GGAGCGACAGTATTTAGAGCATTTGGTGAGAGCTTGGGGGGATGAGAGGA
GGGATTGAGTGGGTGTAAGTGAAGGGATAGCAGGGAGAGAAAATGCACCA
TTTTGGAGGGCCAGACGCATGTAACCGTCAAAGCCTGAGTGCTTTCGTCT
ATTCACCCGCTCCCCATCAACCTGCCCCCCTTGTAGGAGTACATTGCCCG
CAAACTAGTGCAGTGGGGAAAGGTGGCGGAATTCAAAAAGGACCTCGCCG
ACTGCCGGAAGAAGCCCAACGCTTATTTCGGGTACGCCGTCTCATTTAAT
ATCGCGGTGTCGGAGGAGGCGATTGAGCAGTTTGTGGAAGATGCGCGCAT
TTCCAAGGTAAGTAAGTCTTGAAGGCCTCTGCGTCTTGTACGTGTTCGAG
ACATGTTAAGGTCAGCGTGCCTTTGTGTGAATGAGACTATCAACCATTTG
TCGCCTGCTGCATTTGTATCTAGCGTTTATAAAAACTACTATACAATCTT
TCCATTTACCAACCCGCGCAGGAGGAGGACGAGTAAGGATACGAAGCAGC
GGGACCCAACAAAACTGGAATACAGACAGGCACCCATAGAACGTGCGCAC
GTAGTAGCCTTTTCCACCGTCATTATGTTGTAGATAGAAATGTGTGGCTG
GTGGATCAAAAGGGAAAGAGAAGTTTTGCAGTCGCCGTCAGAGGAAAGAT
GCGGCGATGGTGAATGGACAAGCGAAGGAAGACGGAAAGGAGACAGAGAG
AGCGTTAGACTTTCCATGAGTTATTGGAGAAGGGGAGGTTCCACAGTTGT
AAAAGTAATCTAAAGAGAAGTAAAGAAGCAAGAAGGGTTGTGATGTCA back to topCoding sequence (CDS) from alignment at scaffold_44:60752..62049- >mRNA_9545 ID=mRNA_9545|Name=jgi.p|Nanoce1779_2|609115|organism=Nannochloropsis oceanica|type=CDS|length=1854bp|location=Sequence derived from alignment at scaffold_44:60752..62049- (Nannochloropsis oceanica)
GAGGAGGACGAGTAAGAGTACATTGCCCGCAAACTAGTGCAGTGGGGAAA
GGTGGCGGAATTCAAAAAGGACCTCGCCGACTGCCGGAAGAAGCCCAACG
CTTATTTCGGGTACGCCGTCTCATTTAATATCGCGGTGTCGGAGGAGGCG
ATTGAGCAGTTTGTGGAAGATGCGCGCATTTCCAAGATGAAGACATCGTG
TTTGGCGCTGCTACTGCTGCTCGTGGCGGTGGCTGTGAGCAAGCAAGTGG
CATCTTTTGTTCTCCCTTCTTCTGCCCCCTCCTTTGCCGCCTCGTCAGCC
ATCGTAGCCCCTCGCGGGCCGGTCTCATCCTCCACTTTGGTAGCCCCGCT
GAACGTGGTCATAACCCCTGATGGTTCTCCGTCCATGCAAGAGTATCGTA
AGAAGGTACTGCAGGACTTGGTTGAGCGGAAGAACAACGGGGAGCTGGAT
GGGTACCAGCTTTTCGACATGATAGTGGCCAAGTGGGGGGTTCCTTATGG
GGTGGAGCTTCGGCGGTTAGACTTTGCGGGAAAGAAGCTTCTGTACATAA
ACGTTATGTGGAAATACTTGGGACAGTCTTCTTTTCCCTTATCGGAGCGA
CAGTATTTAGAGCATTTGGAGGAGGACGAGTAAGAGTACATTGCCCGCAA
ACTAGTGCAGTGGGGAAAGGTGGCGGAATTCAAAAAGGACCTCGCCGACT
GCCGGAAGAAGCCCAACGCTTATTTCGGGTACGCCGTCTCATTTAATATC
GCGGTGTCGGAGGAGGCGATTGAGCAGTTTGTGGAAGATGCGCGCATTTC
CAAGATGAAGACATCGTGTTTGGCGCTGCTACTGCTGCTCGTGGCGGTGG
CTGTGAGCAAGCAAGTGGCATCTTTTGTTCTCCCTTCTTCTGCCCCCTCC
TTTGCCGCCTCGTCAGCCATCGTAGCCCCTCGCGGGCCGGTCTCATCCTC
CACTTTGGTAGCCCCGCTGAACGTGGTCATAACCCCTGATGGTTCTCCGT
CCATGCAAGAGTATCGTAAGAAGGTACTGCAGGACTTGGTTGAGCGGAAG
AACAACGGGGAGCTGGATGGGTACCAGCTTTTCGACATGATAGTGGCCAA
GTGGGGGGTTCCTTATGGGGTGGAGCTTCGGCGGTTAGACTTTGCGGGAA
AGAAGCTTCTGTACATAAACGTTATGTGGAAATACTTGGGACAGTCTTCT
TTTCCCTTATCGGAGCGACAGTATTTAGAGCATTTGGAGGAGGACGAGTA
AGAGTACATTGCCCGCAAACTAGTGCAGTGGGGAAAGGTGGCGGAATTCA
AAAAGGACCTCGCCGACTGCCGGAAGAAGCCCAACGCTTATTTCGGGTAC
GCCGTCTCATTTAATATCGCGGTGTCGGAGGAGGCGATTGAGCAGTTTGT
GGAAGATGCGCGCATTTCCAAGATGAAGACATCGTGTTTGGCGCTGCTAC
TGCTGCTCGTGGCGGTGGCTGTGAGCAAGCAAGTGGCATCTTTTGTTCTC
CCTTCTTCTGCCCCCTCCTTTGCCGCCTCGTCAGCCATCGTAGCCCCTCG
CGGGCCGGTCTCATCCTCCACTTTGGTAGCCCCGCTGAACGTGGTCATAA
CCCCTGATGGTTCTCCGTCCATGCAAGAGTATCGTAAGAAGGTACTGCAG
GACTTGGTTGAGCGGAAGAACAACGGGGAGCTGGATGGGTACCAGCTTTT
CGACATGATAGTGGCCAAGTGGGGGGTTCCTTATGGGGTGGAGCTTCGGC
GGTTAGACTTTGCGGGAAAGAAGCTTCTGTACATAAACGTTATGTGGAAA
TACTTGGGACAGTCTTCTTTTCCCTTATCGGAGCGACAGTATTTAGAGCA
TTTG back to top
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