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Properties
Property Name | Value |
TranscriptId | 609160 |
Track | FilteredModels2 |
ProteinId | 609074 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_44 | supercontig | scaffold_44:35081..36395 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9534 ID=mRNA_9534|Name=jgi.p|Nanoce1779_2|609074|organism=Nannochloropsis oceanica|type=mRNA|length=1189bp AGCTAGCTGGACTGAATCAAGGACAGCAAGCATGTCGTTCGGGCCGAAAA CGGGCTACCGCGACGGCGGCAATAGAGGCGGACAGGACCGATTCAAGTGG GAGGATGTGAAAGACGAACACTACCGTGAGCATTATTTGGGACACAGCCT CAAGGCCCCCGTCGGACGCTGGCAGAAAGGCAAAGACCTAATGTGGTACA CCAAAGCAGACAAAGGAGGGGAGAAAGGGAAAGAGGATGCGGAGGCGCAA CGACGGAGGGAGTTAGCGGAGTTTCGACGACGGGACGAAGACATGATTAA TGCTGCCTTGGGGTTGGCACCGGCACGTCAGGCAGTAGTAGAGACTACAC TCGATGCAAGTGAGCTGAAACAGCTGCTGGCAAGGGGGGCGAGCGAGAGG GGGGATATGGATGCAGAGCGCGTGGAGGGTCTCGGAGCAGCGCCTGCAGC GAGGCACGAGCACTTGCCCAAGGGAAAGAGTATGGTTGAGCGAGAGATTG AAAGGATGAAGAAAGAACAGGCGGAGGGGAGAGGTTTTGAATACGAGGAG GATGCGAGTCATATGCATGAGGAAGAAGGGAACGATGTGGTGAAGGACGG AGGGGGAAAGAGGAAGAAGAATAGAGATGAAGACAAGGAGAAGAAGGAGA AGAAAAAGAGGAAGAAGGAGGAAAAGAAAAAGGAGGAAAAGAAGAAAAAG AAGGTGGTGAAAAAGGAGCGAAAGAAGGCAAAGAAAGCGATGCGCAAGGA AGAAGATGATGAGGGGGCAGGAAGGGAGGGAGGTCGTGGCCAAGGACGCT CCGAGAGGGGTCGAAGCTCGAGCGACAACAGCTGCAGGAGCAGCAGCGCC GGCCCCGAGCATCGCATGCGACACGTATCGATAGACAAAACTCACCATGA TGGTGCAGAGGAGAGGCAGAGGGAGGCGGGGCGCTGTGGGGGAAAACGCC CTGAAAGAGAGAGAGGCCGAAGCGCCAGCCGCAGCAGTAGGAGCGCCAGT CCCGATGACCGGAAGCGACGGCGACTACGGACAGAGAGCATATCACGCTC CAGGTCCAGACCTCGTAATTCTTATGTCCGTGAGCAGGGCCGCCGCCGCG GGAGATAATCATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG back to topprotein sequence of jgi.p|Nanoce1779_2|609074 >mRNA_9534-protein ID=mRNA_9534-protein|Name=jgi.p|Nanoce1779_2|609074|organism=Nannochloropsis oceanica|type=polypeptide|length=359bp MSFGPKTGYRDGGNRGGQDRFKWEDVKDEHYREHYLGHSLKAPVGRWQKG KDLMWYTKADKGGEKGKEDAEAQRRRELAEFRRRDEDMINAALGLAPARQ AVVETTLDASELKQLLARGASERGDMDAERVEGLGAAPAARHEHLPKGKS MVEREIERMKKEQAEGRGFEYEEDASHMHEEEGNDVVKDGGGKRKKNRDE DKEKKEKKKRKKEEKKKEEKKKKKVVKKERKKAKKAMRKEEDDEGAGREG GRGQGRSERGRSSSDNSCRSSSAGPEHRMRHVSIDKTHHDGAEERQREAG RCGGKRPERERGRSASRSSRSASPDDRKRRRLRTESISRSRSRPRNSYVR EQGRRRGR* back to topmRNA from alignment at scaffold_44:35081..36395- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9534 ID=mRNA_9534|Name=jgi.p|Nanoce1779_2|609074|organism=Nannochloropsis oceanica|type=mRNA|length=1315bp|location=Sequence derived from alignment at scaffold_44:35081..36395- (Nannochloropsis oceanica) AGCTAGCTGGACTGAATCAAGGACAGCAAGCATGTCGTTCGGGCCGAAAA
CGGGCTACCGCGACGGCGGCAATAGAGGCGGACAGGACCGATTCAAGTGG
GAGGATGTGAAAGACGGTAGGCGTGGTGCTTGATTGGGTGGGTGGGGTGA
GGAATGATCAGCATGGACATGACTCATATCTCTATTTTCCTCCTTGCCCG
TTCTCCTTCCCTCCTTCCCCGCTCCTTCCAACCCCTTCGTAGAACACTAC
CGTGAGCATTATTTGGGACACAGCCTCAAGGCCCCCGTCGGACGCTGGCA
GAAAGGCAAAGACCTAATGTGGTACACCAAAGCAGACAAAGGAGGGGAGA
AAGGGAAAGAGGATGCGGAGGCGCAACGACGGAGGGAGTTAGCGGAGTTT
CGACGACGGGACGAAGACATGATTAATGCTGCCTTGGGGTTGGCACCGGC
ACGTCAGGCAGTAGTAGAGACTACACTCGATGCAAGTGAGCTGAAACAGC
TGCTGGCAAGGGGGGCGAGCGAGAGGGGGGATATGGATGCAGAGCGCGTG
GAGGGTCTCGGAGCAGCGCCTGCAGCGAGGCACGAGCACTTGCCCAAGGG
AAAGAGTATGGTTGAGCGAGAGATTGAAAGGATGAAGAAAGAACAGGCGG
AGGGGAGAGGTTTTGAATACGAGGAGGATGCGAGTCATATGCATGAGGAA
GAAGGGAACGATGTGGTGAAGGACGGAGGGGGAAAGAGGAAGAAGAATAG
AGATGAAGACAAGGAGAAGAAGGAGAAGAAAAAGAGGAAGAAGGAGGAAA
AGAAAAAGGAGGAAAAGAAGAAAAAGAAGGTGGTGAAAAAGGAGCGAAAG
AAGGCAAAGAAAGCGATGCGCAAGGAAGAAGATGATGAGGGGGCAGGAAG
GGAGGGAGGTCGTGGCCAAGGACGCTCCGAGAGGGGTCGAAGCTCGAGCG
ACAACAGCTGCAGGAGCAGCAGCGCCGGCCCCGAGCATCGCATGCGACAC
GTATCGATAGACAAAACTCACCATGATGGTGCAGAGGAGAGGCAGAGGGA
GGCGGGGCGCTGTGGGGGAAAACGCCCTGAAAGAGAGAGAGGCCGAAGCG
CCAGCCGCAGCAGTAGGAGCGCCAGTCCCGATGACCGGAAGCGACGGCGA
CTACGGACAGAGAGCATATCACGCTCCAGGTCCAGACCTCGTAATTCTTA
TGTCCGTGAGCAGGGCCGCCGCCGCGGGAGATAATCATGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAG back to topCoding sequence (CDS) from alignment at scaffold_44:35081..36395- >mRNA_9534 ID=mRNA_9534|Name=jgi.p|Nanoce1779_2|609074|organism=Nannochloropsis oceanica|type=CDS|length=2154bp|location=Sequence derived from alignment at scaffold_44:35081..36395- (Nannochloropsis oceanica) AACACTACCGTGAGCATTATTTGGGACACAGCCTCAAGGCCCCCGTCGGA CGCTGGCAGAAAGGCAAAGACCTAATGTGGTACACCAAAGCAGACAAAGG AGGGGAGAAAGGGAAAGAGGATGCGGAGGCGCAACGACGGAGGGAGTTAG CGGAGTTTCGACGACGGGACGAAGACATGATTAATGCTGCCTTGGGGTTG GCACCGGCACGTCAGGCAGTAGTAGAGACTACACTCGATGCAAGTGAGCT GAAACAGCTGCTGGCAAGGGGGGCGAGCGAGAGGGGGGATATGGATGCAG AGCGCGTGGAGGGTCTCGGAGCAGCGCCTGCAGCGAGGCACGAGCACTTG CCCAAGGGAAAGAGTATGGTTGAGCGAGAGATTGAAAGGATGAAGAAAGA ACAGGCGGAGGGGAGAGGTTTTGAATACGAGGAGGATGCGAGTCATATGC ATGAGGAAGAAGGGAACGATGTGGTGAAGGACGGAGGGGGAAAGAGGAAG AAGAATAGAGATGAAGACAAGGAGAAGAAGGAGAAGAAAAAGAGGAAGAA GGAGGAAAAGAAAAAGGAGGAAAAGAAGAAAAAGAAGGTGGTGAAAAAGG AGCGAAAGAAGGCAAAGAAAGCGATGCGCAAGGAAGAAGATGATGAGGGG GCAGGAAGGGAGGGAGGTCGTGGCCAAGGACGCTCCGAGAGGGGTCGAAG CTCGAGCGACAACAGCTGCAGGAGCAGCAGCGCCGGCCCCGAGCATCGCA TGCGACACGTATCGATAGACAAAACTCACCATGATGGTGCAGAGGAGAGG CAGAGGGAGGCGGGGCGCTGTGGGGGAAAACGCCCTGAAAGAGAGAGAGG CCGAAGCGCCAGCCGCAGCAGTAGGAGCGCCAGTCCCGATGACCGGAAGC GACGGCGACTACGGACAGAGAGCATATCACGCTCCAGGTCCAGACCTCGT AATTCTTATGTCCGTGAGCAGGGCCGCCGCCGCGGGAGATAAATGTCGTT CGGGCCGAAAACGGGCTACCGCGACGGCGGCAATAGAGGCGGACAGGACC GATTCAAGTGGGAGGATGTGAAAGACGAACACTACCGTGAGCATTATTTG GGACACAGCCTCAAGGCCCCCGTCGGACGCTGGCAGAAAGGCAAAGACCT AATGTGGTACACCAAAGCAGACAAAGGAGGGGAGAAAGGGAAAGAGGATG CGGAGGCGCAACGACGGAGGGAGTTAGCGGAGTTTCGACGACGGGACGAA GACATGATTAATGCTGCCTTGGGGTTGGCACCGGCACGTCAGGCAGTAGT AGAGACTACACTCGATGCAAGTGAGCTGAAACAGCTGCTGGCAAGGGGGG CGAGCGAGAGGGGGGATATGGATGCAGAGCGCGTGGAGGGTCTCGGAGCA GCGCCTGCAGCGAGGCACGAGCACTTGCCCAAGGGAAAGAGTATGGTTGA GCGAGAGATTGAAAGGATGAAGAAAGAACAGGCGGAGGGGAGAGGTTTTG AATACGAGGAGGATGCGAGTCATATGCATGAGGAAGAAGGGAACGATGTG GTGAAGGACGGAGGGGGAAAGAGGAAGAAGAATAGAGATGAAGACAAGGA GAAGAAGGAGAAGAAAAAGAGGAAGAAGGAGGAAAAGAAAAAGGAGGAAA AGAAGAAAAAGAAGGTGGTGAAAAAGGAGCGAAAGAAGGCAAAGAAAGCG ATGCGCAAGGAAGAAGATGATGAGGGGGCAGGAAGGGAGGGAGGTCGTGG CCAAGGACGCTCCGAGAGGGGTCGAAGCTCGAGCGACAACAGCTGCAGGA GCAGCAGCGCCGGCCCCGAGCATCGCATGCGACACGTATCGATAGACAAA ACTCACCATGATGGTGCAGAGGAGAGGCAGAGGGAGGCGGGGCGCTGTGG GGGAAAACGCCCTGAAAGAGAGAGAGGCCGAAGCGCCAGCCGCAGCAGTA GGAGCGCCAGTCCCGATGACCGGAAGCGACGGCGACTACGGACAGAGAGC ATATCACGCTCCAGGTCCAGACCTCGTAATTCTTATGTCCGTGAGCAGGG CCGCCGCCGCGGGAGATAAATGTCGTTCGGGCCGAAAACGGGCTACCGCG ACGGCGGCAATAGAGGCGGACAGGACCGATTCAAGTGGGAGGATGTGAAA GACG back to top
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